Works by Naito, Satoshi

Results: 75

Construction of Perfect Crystals Conjecturally Corresponding to Kirillov-Reshetikhin Modules over Twisted Quantum Affine Algebras.

Published in:

Communications in Mathematical Physics, 2006, v. 263, n. 3, p. 749, doi. 10.1007/s00220-005-1515-2

By:

Naito, Satoshi;
Sagaki, Daisuke

Publication type:

Article

Closed k-Schur Katalan functions as K-homology Schubert representatives of the affine Grassmannian.

Published in:

Transactions of the American Mathematical Society, Series B, 2024, v. 11, p. 667, doi. 10.1090/btran/184

By:

Ikeda, Takeshi;
Iwao, Shinsuke;
Naito, Satoshi

Publication type:

Article

Impact of translational regulation on diel expression revealed by time‐series ribosome profiling in Arabidopsis.

Published in:

Plant Journal, 2024, v. 118, n. 6, p. 1889, doi. 10.1111/tpj.16716

By:

Aoyama, Haruka;
Arae, Toshihiro;
Yamashita, Yui;
Toyoda, Atsushi;
Naito, Satoshi;
Sotta, Naoyuki;
Chiba, Yukako

Publication type:

Article

Global analysis of boron‐induced ribosome stalling reveals its effects on translation termination and unique regulation by AUG‐stops in Arabidopsis shoots.

Published in:

Plant Journal, 2021, v. 106, n. 5, p. 1455, doi. 10.1111/tpj.15248

By:

Sotta, Naoyuki;
Chiba, Yukako;
Miwa, Kyoko;
Takamatsu, Seidai;
Tanaka, Mayuki;
Yamashita, Yui;
Naito, Satoshi;
Fujiwara, Toru

Publication type:

Article

Negative fallout from public sentiment in Japan.

Published in:

2004

By:

Watanabe, Kazuo N.;
Fujimura, Tatsuhito;
Shimamota, Ko;
Hashimoto, Takashi;
Koizumi, Nozomi;
Fukuda, Hiroo;
Naito, Satoshi;
Nakamura, Kenzo;
Mimura, Tetsuro;
Ohhashi, Yuko;
Shimazaki, Kenichirou;
Terashima, Ichirou;
Uchimiya, Hirofumi;
Yamaya, Tomoyuki

Publication type:

Letter

Cyclic Diaminocarbene--Rhodium(I) Complex Tethered to Disulfide: Synthesis and Application to Gold Surface Modification.

Published in:

Chemistry Letters, 2006, v. 35, n. 8, p. 21, doi. 10.1246/cl.2006.870

By:

Hara, Kenji;
Iwahashi, Keiji;
Kanamori, Yoshikazu;
Naito, Satoshi;
Takakusagi, Satoru;
Uosaki, Kohei;
Sawamura, Masaya

Publication type:

Article

A Generalization of Quantum Lakshmibai-Seshadri Paths for an Arbitrary Weight: A Generalization of QLS Paths: T. Kouno and S. Naito.

Published in:

Algebras & Representation Theory, 2024, v. 27, n. 6, p. 2321, doi. 10.1007/s10468-024-10298-2

By:

Kouno, Takafumi;
Naito, Satoshi

Publication type:

Article

Identities of Inverse Chevalley Type for the Graded Characters of Level-Zero Demazure Submodules over Quantum Affine Algebras of Type C.

Published in:

Algebras & Representation Theory, 2024, v. 27, n. 1, p. 429, doi. 10.1007/s10468-023-10221-1

By:

Kouno, Takafumi;
Naito, Satoshi;
Orr, Daniel

Publication type:

Article

Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition.

Published in:

Plant Journal, 2006, v. 48, n. 4, p. 557, doi. 10.1111/j.1365-313X.2006.02900.x

By:

Higashi, Yasuhiro;
Hirai, Masami Yokota;
Fujiwara, Toru;
Naito, Satoshi;
Noji, Masaaki;
Saito, Kazuki

Publication type:

Article

The FUS3 transcription factor functions through the epidermal regulator TTG1 during embryogenesis in Arabidopsis.

Published in:

Plant Journal, 2004, v. 37, n. 1, p. 73, doi. 10.1046/j.1365-313X.2003.01939.x

By:

Tsuchiya, Yuichiro;
Nambara, Eiji;
Naito, Satoshi;
McCourt, Peter

Publication type:

Article

Sucrose sensing through nascent peptide-meditated ribosome stalling at the stop codon of Arabidopsis bZIP11 uORF2.

Published in:

FEBS Letters, 2017, v. 591, n. 9, p. 1266, doi. 10.1002/1873-3468.12634

By:

Yamashita, Yui;
Takamatsu, Seidai;
Glasbrenner, Michael;
Becker, Thomas;
Naito, Satoshi;
Beckmann, Roland

Publication type:

Article

Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6662-5

By:

Takahashi, Hiro;
Hayashi, Noriya;
Hiragori, Yuta;
Sasaki, Shun;
Motomura, Taichiro;
Yamashita, Yui;
Naito, Satoshi;
Takahashi, Anna;
Fuse, Kazuyuki;
Satou, Kenji;
Endo, Toshinori;
Kojima, Shoko;
Onouchi, Hitoshi

Publication type:

Article

UDP- d-galactose synthesis by UDP-glucose 4-epimerase 4 is required for organization of the trans-Golgi network/early endosome in Arabidopsis thaliana root epidermal cells.

Published in:

Journal of Plant Research, 2015, v. 128, n. 5, p. 863, doi. 10.1007/s10265-015-0737-4

By:

Wang, Sheliang;
Ito, Toshiaki;
Uehara, Masataka;
Naito, Satoshi;
Takano, Junpei

Publication type:

Article

Co-ordinated Regulations of mRNA Synthesis and Decay during Cold Acclimation in Arabidopsis Cells.

Published in:

Plant & Cell Physiology, 2017, v. 58, n. 6, p. 1090, doi. 10.1093/pcp/pcx059

By:

Toshihiro Arae;
Shiori Isai;
Akira Sakai;
Katsuhiko Mineta;
Masami Yokota Hirai;
Yuya Suzuki;
Shigehiko Kanaya;
Junji Yamaguchi;
Satoshi Naito;
Yukako Chiba

Publication type:

Article

DRP1-Dependent Endocytosis is Essential for Polar Localization and Boron-Induced Degradation of the Borate Transporter BOR1 in Arabidopsis thaliana.

Published in:

Plant & Cell Physiology, 2016, v. 57, n. 9, p. 1985, doi. 10.1093/pcp/pcw121

By:

Akira Yoshinari;
Masaru Fujimoto;
Takashi Ueda;
Noriko Inada;
Satoshi Naito;
Junpei Takano

Publication type:

Article

Evolutionary Divergence of Plant Borate Exporters and Critical Amino Acid Residues for the Polar Localization and Boron-Dependent Vacuolar Sorting of AtBOR1.

Published in:

Plant & Cell Physiology, 2015, v. 56, n. 5, p. 852, doi. 10.1093/pcp/pcv011

By:

Shinji Wakuta;
Katsuhiko Mineta;
Taro Amano;
Atsushi Toyoda;
Toru Fujiwara;
Satoshi Naito;
Junpei Takano

Publication type:

Article

The N-Terminal Cleavable Pre-Sequence Encoded in the First Exon of Cystathionine γ-Synthase Contains Two Different Functional Domains for Chloroplast Targeting and Regulation of Gene Expression.

Published in:

Plant & Cell Physiology, 2014, v. 55, n. 10, p. 1779, doi. 10.1093/pcp/pcu110

By:

Hagiwara-Komoda, Yuka;
Sugiyama, Tomoya;
Yamashita, Yui;
Onouchi, Hitoshi;
Naito, Satoshi

Publication type:

Article

Polyamine-Responsive Ribosomal Arrest at the Stop Codon of an Upstream Open Reading Frame of the AdoMetDC1 Gene Triggers Nonsense-Mediated mRNA Decay in Arabidopsis thaliana.

Published in:

Plant & Cell Physiology, 2014, v. 55, n. 9, p. 1556, doi. 10.1093/pcp/pcu086

By:

Uchiyama-Kadokura, Naoko;
Murakami, Karin;
Takemoto, Mariko;
Koyanagi, Naoto;
Murota, Katsunori;
Naito, Satoshi;
Onouchi, Hitoshi

Publication type:

Article

Identification and Characterization of an Arabidopsis Mutant with Altered Localization of NIP5;1, a Plasma Membrane Boric Acid Channel, Reveals the Requirement for d-Galactose in Endomembrane Organization.

Published in:

Plant & Cell Physiology, 2014, v. 55, n. 4, p. 704, doi. 10.1093/pcp/pct191

By:

Uehara, Masataka;
Wang, Sheliang;
Kamiya, Takehiro;
Shigenobu, Shuji;
Yamaguchi, Katsushi;
Fujiwara, Toru;
Naito, Satoshi;
Takano, Junpei

Publication type:

Article

SS-mPMG and SS-GA: Tools for Finding Pathways and Dynamic Simulation of Metabolic Networks.

Published in:

Plant & Cell Physiology, 2013, v. 54, n. 5, p. 728, doi. 10.1093/pcp/pct052

By:

Katsuragi, Tetsuo;
Ono, Naoaki;
Yasumoto, Keiichi;
Altaf-Ul-Amin, Md.;
Hirai, Masami Y.;
Sriyudthsak, Kansuporn;
Sawada, Yuji;
Yamashita, Yui;
Chiba, Yukako;
Onouchi, Hitoshi;
Fujiwara, Toru;
Naito, Satoshi;
Shiraishi, Fumihide;
Kanaya, Shigehiko

Publication type:

Article

Changes in mRNA Stability Associated with Cold Stress in Arabidopsis Cells.

Published in:

Plant & Cell Physiology, 2013, v. 54, n. 2, p. 180, doi. 10.1093/pcp/pcs164

By:

Chiba, Yukako;
Mineta, Katsuhiko;
Hirai, Masami Y.;
Suzuki, Yuya;
Kanaya, Shigehiko;
Takahashi, Hiro;
Onouchi, Hitoshi;
Yamaguchi, Junji;
Naito, Satoshi

Publication type:

Article

Arabidopsis Cell-Free Extract, ACE, a New In Vitro Translation System Derived from Arabidopsis Callus Cultures.

Published in:

Plant & Cell Physiology, 2011, v. 52, n. 8, p. 1443, doi. 10.1093/pcp/pcr080

By:

Murota, Katsunori;
Hagiwara-Komoda, Yuka;
Komoda, Keisuke;
Onouchi, Hitoshi;
Ishikawa, Masayuki;
Naito, Satoshi

Publication type:

Article

Nascent Peptide-Mediated Translation Elongation Arrest of Arabidopsis thaliana CGS1 mRNA Occurs Autonomously.

Published in:

Plant & Cell Physiology, 2008, v. 49, n. 4, p. 549, doi. 10.1093/pcp/pcn028

By:

Hitoshi Onouchi;
Yuhi Haraguchi;
Mari Nakamoto;
Daisuke Kawasaki;
Yoko Nagami-Yamashita;
Katsunori Murota;
Azusa Kezuka-Hosomi;
Yukako Chiba;
Satoshi Naito

Publication type:

Article

Ribosome Stacking Defines CGS1 mRNA Degradation Sites During Nascent Peptide-Mediated Translation Arrest.

Published in:

Plant & Cell Physiology, 2008, v. 49, n. 3, p. 314, doi. 10.1093/pcp/pcn005

By:

Yuhi Haraguchi;
Yoshitomo Kadokura;
Mari Nakamoto;
Hitoshi Onouchi;
Satoshi Naito

Publication type:

Article

Decay Kinetics of Autogenously Regulated CGS1 mRNA That Codes for Cystathionine γ-Synthase in Arabidopsis thaliana.

Published in:

Plant & Cell Physiology, 2003, v. 44, n. 9, p. 893, doi. 10.1093/pcp/pcg114

By:

Lambein, Ingrid;
Chiba, Yukako;
Onouchi, Hitoshi;
Naito, Satoshi

Publication type:

Article

Differential Tissue-Specific Response to Sulfate and Methionine of a Soybean Seed Storage Protein Promoter Region in Transgenic Arabidopsis.

Published in:

Plant & Cell Physiology, 2002, v. 43, n. 11, p. 1266, doi. 10.1093/pcp/pcf149

By:

Ohkama, Naoko;
Goto, Derek B.;
Fujiwara, Toru;
Naito, Satoshi

Publication type:

Article

AtMRD1 and AtMRU1, Two Novel Genes with Altered mRNA Levels in the Methionine Over-Accumulating mto1-1 Mutant of Arabidopsis thaliana.

Published in:

Plant & Cell Physiology, 2002, v. 43, n. 8, p. 923, doi. 10.1093/pcp/pcf107

By:

Goto, Derek B.;
Naito, Satoshi

Publication type:

Article

The First Exon Coding Region of Cystathionine γ-Synthase Gene is Necessary and Sufficient for Downregulation of its own mRNA Accumulation in Transgenic Arabidopsis thaliana.

Published in:

Plant & Cell Physiology, 2001, v. 42, n. 10, p. 1174, doi. 10.1093/pcp/pce146

By:

Suzuki, Akinori;
Shirata, Yukie;
Ishida, Hirotaka;
Chiba, Yukako;
Onouchi, Hitoshi;
Naito, Satoshi

Publication type:

Article

Post-Transcriptional Gene Silencing in Cultured Rice Cells.

Published in:

Plant & Cell Physiology, 2000, v. 41, n. 3, p. 321, doi. 10.1093/pcp/41.3.321

By:

Kanno, Tatsuo;
Naito, Satoshi;
Shimamoto, Ko

Publication type:

Article

Characterization of an Arabidopsis thaliana Mutant that Has a Defect in ABA Accumulation: ABA-Dependent and ABA-Independent Accumulation of Free Amino Acids during Dehydration.

Published in:

Plant & Cell Physiology, 1998, v. 39, n. 8, p. 853, doi. 10.1093/oxfordjournals.pcp.a029444

By:

Nambara, Eiji;
Kawaide, Hiroshi;
Kamiya, Yuji;
Naito, Satoshi

Publication type:

Article

Crystal structure on the set of Lakshmibai-Seshadri paths of an arbitrary level-zero shape.

Published in:

Proceedings of the London Mathematical Society, 2008, v. 96, n. 3, p. 582, doi. 10.1112/plms/pdm034

By:

Satoshi Naito;
Daisuke Sagaki

Publication type:

Article

Polar Localization of the NIP5;1 Boric Acid Channel Is Maintained by Endocytosis and Facilitates Boron Transport in Arabidopsis Roots.

Published in:

Plant Cell, 2017, v. 29, n. 4, p. 824, doi. 10.1105/tpc.16.00825

By:

Wang, Sheliang;
Yoshinari, Akira;
Shimada, Tomoo;
Hara-Nishimura, Ikuko;
Mitani-Ueno, Namiki;
Ma, Jian Feng;
Naito, Satoshi;
Takano, Junpei

Publication type:

Article

Minimum Open Reading Frame, AUG-Stop, Induces Boron-Dependent Ribosome Stalling and mRNA Degradation.

Published in:

Plant Cell, 2016, v. 28, n. 11, p. 2830, doi. 10.1105/tpc.16.00481

By:

Tanaka, Mayuki;
Sotta, Naoyuki;
Yamazumi, Yusuke;
Yamashita, Yui;
Miwa, Kyoko;
Murota, Katsunori;
Chiba, Yukako;
Hirai, Masami Yokota;
Akiyama, Tetsu;
Onouchi, Hitoshi;
Naito, Satoshi;
Fujiwara, Toru

Publication type:

Article

Boron-Dependent Degradation of NIP5;1 mRNA for Acclimation to Excess Boron Conditions in Arabidopsis.

Published in:

Plant Cell, 2011, v. 23, n. 9, p. 3547, doi. 10.1105/tpc.111.088351

By:

Tanaka, Mayuki;
Takano, Junpei;
Chiba, Yukako;
Lombardo, Fabien;
Ogasawara, Yuki;
Onouchi, Hitoshi;
Naito, Satoshi;
Fujiwara, Toru

Publication type:

Article

Isolation of an Arabidopsis thaliana mutant in which accumulation of cucumber mosaic virus coat protein is delayed.

Published in:

Plant Journal, 1998, v. 13, n. 2, doi. 10.1046/j.1365-313X.1998.00024.x

By:

Yoshii, Motoyasu;
Yoshioka, Norimichi;
Ishikawa, Masayuki;
Naito, Satoshi

Publication type:

Article

The Arabidopsis HSP18.2 promoter/GUS gene fusion in transgenic Arabidopsis plants: a powerful tool for the isolation of regulatory mutants of the heat-shock response.

Published in:

Plant Journal, 1992, v. 2, n. 5, p. 751, doi. 10.1111/j.1365-313X.1992.tb00144.x

By:

Takahashi, Taku;
Naito, Satoshi;
Komeda, Yoshibumi

Publication type:

Article

A mutant of Arabidopsis which is defective in seed development and storage protein accumulation is a new abi3 allele.

Published in:

Plant Journal, 1992, v. 2, n. 4, p. 435, doi. 10.1111/j.1365-313X.1992.00435.x

By:

Nambara, Eiji;
Naito, Satoshi;
McCourt, Peter

Publication type:

Article

A halt in poly(A) shortening during S-adenosyl-Lmethionine-induced translation arrest in CGS1 mRNA of Arabidopsis thaliana.

Published in:

Genes & Genetic Systems, 2013, v. 88, n. 4, p. 241, doi. 10.1266/ggs.88.241

By:

Yamashita, Yui;
Lambein, Ingrid;
Kobayashi, Soko;
Onouchi, Hitoshi;
Chiba, Yukako;
Naito, Satoshi

Publication type:

Article

Crystal Base Elements of an Extremal Weight Module Fixed by a Diagram Automorphism.

Published in:

Algebras & Representation Theory, 2005, v. 8, n. 5, p. 689, doi. 10.1007/s10468-005-0234-x

By:

Satoshi Naito;
Daisuke Sagaki

Publication type:

Article

BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome.

Published in:

Bioinformatics, 2012, v. 28, n. 17, p. 2231, doi. 10.1093/bioinformatics/bts303

By:

Takahashi, Hiro;
Takahashi, Anna;
Naito, Satoshi;
Onouchi, Hitoshi

Publication type:

Article

A Uniform Model for Kirillov-Reshetikhin Crystals II. Alcove Model, Path Model, and P = X.

Published in:

IMRN: International Mathematics Research Notices, 2017, v. 2017, n. 14, p. 4259, doi. 10.1093/imrn/rnw129

By:

Lenart, Cristian;
Satoshi Naito;
Daisuke Sagaki;
Schilling, Anne;
Shimozono, Mark

Publication type:

Article

A Uniform Model for Kirillov-Reshetikhin Crystals I: Lifting the Parabolic Quantum Bruhat Graph.

Published in:

IMRN: International Mathematics Research Notices, 2015, v. 2015, n. 7, p. 1848, doi. 10.1093/imrn/rnt263

By:

Lenart, Cristian;
Naito, Satoshi;
Sagaki, Daisuke;
Schilling, Anne;
Shimozono, Mark

Publication type:

Article

Tobamovirus-resistant tobacco generated by RNA interference directed against host genes

Published in:

FEBS Letters, 2005, v. 579, n. 20, p. 4479, doi. 10.1016/j.febslet.2005.07.021

By:

Asano, Momoko;
Satoh, Rena;
Mochizuki, Atsuko;
Tsuda, Shinya;
Yamanaka, Takuya;
Nishiguchi, Masamichi;
Hirai, Katsuyuki;
Meshi, Tetsuo;
Naito, Satoshi;
Ishikawa, Masayuki

Publication type:

Article

A U-system approach for predicting metabolic behaviors and responses based on an alleged metabolic reaction network.

Published in:

BMC Systems Biology, 2014, v. 8, p. 1, doi. 10.1186/1752-0509-8-S5-S4

By:

Kansuporn Sriyudthsak;
Yuji Sawada;
Yukako Chiba;
Yui Yamashita;
Shigehiko Kanaya;
Hitoshi Onouchi;
Toru Fujiwara;
Satoshi Naito;
Voit, Ebernard O.;
Fumihide Shiraishi;
Masami Yokota Hirai

Publication type:

Article

A Host Small GTP-binding Protein ARL8 Plays Crucial Roles in Tobamovirus RNA Replication.

Published in:

PLoS Pathogens, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.ppat.1002409

By:

Nishikiori, Masaki;
Mori, Masashi;
Dohi, Koji;
Okamura, Hideyasu;
Katoh, Etsuko;
Naito, Satoshi;
Meshi, Tetsuo;
Ishikawa, Masayuki

Publication type:

Article

Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.

Published in:

Amino Acids, 2010, v. 39, n. 4, p. 1013, doi. 10.1007/s00726-010-0562-y

By:

Kusano, Miyako;
Fukushima, Atsushi;
Redestig, Henning;
Kobayashi, Makoto;
Otsuki, Hitomi;
Onouchi, Hitoshi;
Naito, Satoshi;
Hirai, Masami Yokota;
Saito, Kazuki

Publication type:

Article

CERTAIN MODULES WITH TWINING MAPS AND DECOMPOSITION RULES OF LITTELMANN TYPE.

Published in:

Communications in Algebra, 2002, v. 30, n. 8, p. 3917, doi. 10.1081/AGB-120005827

By:

Naito, Satoshi;
Sagaki, Daisuke

Publication type:

Article

The BIG gene is involved in regulation of sulfur deficiency-responsive genes in Arabidopsis thaliana.

Published in:

Physiologia Plantarum, 2007, v. 129, n. 2, p. 351, doi. 10.1111/j.1399-3054.2006.00814.x

By:

Ichiro Kasajima;
Naoko Ohkama-Ohtsu;
Yoko Ide;
Hiroaki Hayashi;
Tadakatsu Yoneyama;
Yoshihito Suzuki;
Satoshi Naito;
Toru Fujiwara

Publication type:

Article

The synergistic effects of sugar and abscisic acid on myo-inositol-1-phosphate synthase expression.

Published in:

Physiologia Plantarum, 2002, v. 114, n. 4, p. 581, doi. 10.1034/j.1399-3054.2002.1140411.x

By:

Yoshida, Kaoru T.;
Toru Fujiwara;
Satoshi Naito

Publication type:

Article

Polar Localization of the Borate Exporter BOR1 Requires AP2-Dependent Endocytosis.

Published in:

Plant Physiology, 2019, v. 179, n. 4, p. 1569, doi. 10.1104/pp.18.01017

By:

Akira Yoshinari;
Takuya Hosokawa;
Taro Amano;
Beier, Marcel Pascal;
Tadashi Kunieda;
Tomoo Shimada;
Ikuko Hara-Nishimura;
Satoshi Naito;
Junpei Takano

Publication type:

Article