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Impact of translational regulation on diel expression revealed by time‐series ribosome profiling in Arabidopsis.
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- Plant Journal, 2024, v. 118, n. 6, p. 1889, doi. 10.1111/tpj.16716
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- Article
Phylogeny-linked occurrence of ribosome stalling on the mRNAs of Arabidopsis unfolded protein response factor bZIP60 orthologs in divergent plant species.
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- Nucleic Acids Research, 2024, v. 52, n. 8, p. 4276, doi. 10.1093/nar/gkae101
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- Article
Closed k-Schur Katalan functions as K-homology Schubert representatives of the affine Grassmannian.
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- Transactions of the American Mathematical Society, Series B, 2024, v. 11, p. 667, doi. 10.1090/btran/184
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- Article
Identities of Inverse Chevalley Type for the Graded Characters of Level-Zero Demazure Submodules over Quantum Affine Algebras of Type C.
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- Algebras & Representation Theory, 2024, v. 27, n. 1, p. 429, doi. 10.1007/s10468-023-10221-1
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- Article
New structure on the quantum alcove model with applications to representation theory and Schubert calculus.
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- Journal of Combinatorial Algebra, 2023, v. 7, n. 3/4, p. 347, doi. 10.4171/JCA/77
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- Article
New structure on the quantum alcove model with applications to representation theory and Schubert calculus.
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- Journal of Combinatorial Algebra, 2023, v. 7, n. 2, p. 347, doi. 10.4171/JCA/77
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- Article
Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels.
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- Plant Molecular Biology, 2023, v. 111, n. 1/2, p. 37, doi. 10.1007/s11103-022-01309-1
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- Article
Translational Landscape of a C4 Plant, Sorghum bicolor, Under Normal and Sulfur-Deficient Conditions.
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- Plant & Cell Physiology, 2022, v. 63, n. 5, p. 592, doi. 10.1093/pcp/pcac023
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- Article
Global analysis of boron‐induced ribosome stalling reveals its effects on translation termination and unique regulation by AUG‐stops in Arabidopsis shoots.
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- Plant Journal, 2021, v. 106, n. 5, p. 1455, doi. 10.1111/tpj.15248
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- Article
Inverse K -Chevalley formulas for semi-infinite flag manifolds, I: minuscule weights in ADE type.
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- Forum of Mathematics, Sigma, 2021, v. 9, p. 1, doi. 10.1017/fms.2021.45
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- Article
Exhaustive identification of conserved upstream open reading frames with potential translational regulatory functions from animal genomes.
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- Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-73307-6
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- Article
Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.
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- BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6662-5
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- Article
Reverse genetics-based biochemical studies of the ribosomal exit tunnel constriction region in eukaryotic ribosome stalling: spatial allocation of the regulatory nascent peptide at the constriction.
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- Nucleic Acids Research, 2020, v. 48, n. 4, p. 1985, doi. 10.1093/nar/gkz1190
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- Article
Polar Localization of the Borate Exporter BOR1 Requires AP2-Dependent Endocytosis.
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- Plant Physiology, 2019, v. 179, n. 4, p. 1569, doi. 10.1104/pp.18.01017
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- Article
Boron-Dependent Translational Suppression of the Borate Exporter BOR1 Contributes to the Avoidance of Boron Toxicity.
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- Plant Physiology, 2018, v. 177, n. 2, p. 759, doi. 10.1104/pp.18.00119
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- Article
Identification of Arabidopsis thaliana upstream open reading frames encoding peptide sequences that cause ribosomal arrest.
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- Nucleic Acids Research, 2017, v. 45, n. 15, p. 8844, doi. 10.1093/nar/gkx528
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- Article
A Uniform Model for Kirillov-Reshetikhin Crystals II. Alcove Model, Path Model, and P = X.
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- IMRN: International Mathematics Research Notices, 2017, v. 2017, n. 14, p. 4259, doi. 10.1093/imrn/rnw129
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- Article
Co-ordinated Regulations of mRNA Synthesis and Decay during Cold Acclimation in Arabidopsis Cells.
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- Plant & Cell Physiology, 2017, v. 58, n. 6, p. 1090, doi. 10.1093/pcp/pcx059
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- Article
Sucrose sensing through nascent peptide-meditated ribosome stalling at the stop codon of Arabidopsis bZIP11 uORF2.
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- FEBS Letters, 2017, v. 591, n. 9, p. 1266, doi. 10.1002/1873-3468.12634
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- Article
Polar Localization of the NIP5;1 Boric Acid Channel Is Maintained by Endocytosis and Facilitates Boron Transport in Arabidopsis Roots.
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- Plant Cell, 2017, v. 29, n. 4, p. 824, doi. 10.1105/tpc.16.00825
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- Article
Newton-Okounkov convex bodies of Schubert varieties and polyhedral realizations of crystal bases.
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- Mathematische Zeitschrift, 2017, v. 285, n. 1/2, p. 325, doi. 10.1007/s00209-016-1709-7
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- Article
Minimum Open Reading Frame, AUG-Stop, Induces Boron-Dependent Ribosome Stalling and mRNA Degradation.
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- Plant Cell, 2016, v. 28, n. 11, p. 2830, doi. 10.1105/tpc.16.00481
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- Article
DRP1-Dependent Endocytosis is Essential for Polar Localization and Boron-Induced Degradation of the Borate Transporter BOR1 in Arabidopsis thaliana.
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- Plant & Cell Physiology, 2016, v. 57, n. 9, p. 1985, doi. 10.1093/pcp/pcw121
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- Article
Demazure submodules of level-zero extremal weight modules and specializations of Macdonald polynomials.
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- Mathematische Zeitschrift, 2016, v. 283, n. 3/4, p. 937, doi. 10.1007/s00209-016-1628-7
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- Article
Truncated yet functional viral protein produced via RNA polymerase slippage implies underestimated coding capacity of RNA viruses.
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- Scientific Reports, 2016, p. 21411, doi. 10.1038/srep21411
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- Article
UDP- d-galactose synthesis by UDP-glucose 4-epimerase 4 is required for organization of the trans-Golgi network/early endosome in Arabidopsis thaliana root epidermal cells.
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- Journal of Plant Research, 2015, v. 128, n. 5, p. 863, doi. 10.1007/s10265-015-0737-4
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- Article
Evolutionary Divergence of Plant Borate Exporters and Critical Amino Acid Residues for the Polar Localization and Boron-Dependent Vacuolar Sorting of AtBOR1.
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- Plant & Cell Physiology, 2015, v. 56, n. 5, p. 852, doi. 10.1093/pcp/pcv011
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- Article
A Uniform Model for Kirillov-Reshetikhin Crystals I: Lifting the Parabolic Quantum Bruhat Graph.
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- IMRN: International Mathematics Research Notices, 2015, v. 2015, n. 7, p. 1848, doi. 10.1093/imrn/rnt263
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- Article
Identification of novel Arabidopsis thaliana upstream open reading frames that control expression of the main coding sequences in a peptide sequence-dependent manner.
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- Nucleic Acids Research, 2015, v. 43, n. 3, p. 1562, doi. 10.1093/nar/gkv018
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A U-system approach for predicting metabolic behaviors and responses based on an alleged metabolic reaction network.
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- BMC Systems Biology, 2014, v. 8, p. 1, doi. 10.1186/1752-0509-8-S5-S4
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- Article
The N-Terminal Cleavable Pre-Sequence Encoded in the First Exon of Cystathionine γ-Synthase Contains Two Different Functional Domains for Chloroplast Targeting and Regulation of Gene Expression.
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- Plant & Cell Physiology, 2014, v. 55, n. 10, p. 1779, doi. 10.1093/pcp/pcu110
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- Article
Polyamine-Responsive Ribosomal Arrest at the Stop Codon of an Upstream Open Reading Frame of the AdoMetDC1 Gene Triggers Nonsense-Mediated mRNA Decay in Arabidopsis thaliana.
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- Plant & Cell Physiology, 2014, v. 55, n. 9, p. 1556, doi. 10.1093/pcp/pcu086
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Identification and Characterization of an Arabidopsis Mutant with Altered Localization of NIP5;1, a Plasma Membrane Boric Acid Channel, Reveals the Requirement for d-Galactose in Endomembrane Organization.
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- Plant & Cell Physiology, 2014, v. 55, n. 4, p. 704, doi. 10.1093/pcp/pct191
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- Article
Roles of BOR2, a Boron Exporter, in Cross Linking of Rhamnogalacturonan II and Root Elongation under Boron Limitation in Arabidopsis.
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- Plant Physiology, 2013, v. 163, n. 4, p. 1699, doi. 10.1104/pp.113.225995
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- Article
A halt in poly(A) shortening during S-adenosyl-Lmethionine-induced translation arrest in CGS1 mRNA of Arabidopsis thaliana.
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- Genes & Genetic Systems, 2013, v. 88, n. 4, p. 241, doi. 10.1266/ggs.88.241
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SS-mPMG and SS-GA: Tools for Finding Pathways and Dynamic Simulation of Metabolic Networks.
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- Plant & Cell Physiology, 2013, v. 54, n. 5, p. 728, doi. 10.1093/pcp/pct052
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- Article
Changes in mRNA Stability Associated with Cold Stress in Arabidopsis Cells.
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- Plant & Cell Physiology, 2013, v. 54, n. 2, p. 180, doi. 10.1093/pcp/pcs164
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- Article
BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome.
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- Bioinformatics, 2012, v. 28, n. 17, p. 2231, doi. 10.1093/bioinformatics/bts303
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A Host Small GTP-binding Protein ARL8 Plays Crucial Roles in Tobamovirus RNA Replication.
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- PLoS Pathogens, 2011, v. 7, n. 12, p. 1, doi. 10.1371/journal.ppat.1002409
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- Article
Boron-Dependent Degradation of NIP5;1 mRNA for Acclimation to Excess Boron Conditions in Arabidopsis.
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- Plant Cell, 2011, v. 23, n. 9, p. 3547, doi. 10.1105/tpc.111.088351
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- Article
Arabidopsis Cell-Free Extract, ACE, a New In Vitro Translation System Derived from Arabidopsis Callus Cultures.
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- Plant & Cell Physiology, 2011, v. 52, n. 8, p. 1443, doi. 10.1093/pcp/pcr080
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Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.
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- Amino Acids, 2010, v. 39, n. 4, p. 1013, doi. 10.1007/s00726-010-0562-y
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- Article
Lakshmibai?Seshadri paths of level-zero shape and one-dimensional sums associated to level-zero fundamental representations.
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- Compositio Mathematica, 2008, v. 144, n. 6, p. 1525, doi. 10.1112/S0010437X08003606
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- Article
Nascent Peptide-Mediated Translation Elongation Arrest of Arabidopsis thaliana CGS1 mRNA Occurs Autonomously.
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- Plant & Cell Physiology, 2008, v. 49, n. 4, p. 549, doi. 10.1093/pcp/pcn028
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- Article
Ribosome Stacking Defines CGS1 mRNA Degradation Sites During Nascent Peptide-Mediated Translation Arrest.
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- Plant & Cell Physiology, 2008, v. 49, n. 3, p. 314, doi. 10.1093/pcp/pcn005
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- Article
The BIG gene is involved in regulation of sulfur deficiency-responsive genes in Arabidopsis thaliana.
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- Physiologia Plantarum, 2007, v. 129, n. 2, p. 351, doi. 10.1111/j.1399-3054.2006.00814.x
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- Article
Proteomic and transcriptomic analysis of Arabidopsis seeds: molecular evidence for successive processing of seed proteins and its implication in the stress response to sulfur nutrition.
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- Plant Journal, 2006, v. 48, n. 4, p. 557, doi. 10.1111/j.1365-313X.2006.02900.x
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- Article
Construction of Perfect Crystals Conjecturally Corresponding to Kirillov-Reshetikhin Modules over Twisted Quantum Affine Algebras.
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- Communications in Mathematical Physics, 2006, v. 263, n. 3, p. 749, doi. 10.1007/s00220-005-1515-2
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- Article
Crystal Base Elements of an Extremal Weight Module Fixed by a Diagram Automorphism.
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- Algebras & Representation Theory, 2005, v. 8, n. 5, p. 689, doi. 10.1007/s10468-005-0234-x
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- Article
Tobamovirus-resistant tobacco generated by RNA interference directed against host genes
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- FEBS Letters, 2005, v. 579, n. 20, p. 4479, doi. 10.1016/j.febslet.2005.07.021
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- Article