Works by Murphy, James M.

Results: 124

Dynamics of necroptosis in kidney ischemia-reperfusion injury.

Published in:

Frontiers in Immunology, 2023, p. 01, doi. 10.3389/fimmu.2023.1251452

By:

Pefanis, Aspasia;
Bongoni, Anjan K.;
McRae, Jennifer L.;
Salvaris, Evelyn J.;
Fisicaro, Nella;
Murphy, James M.;
Ierino, Francesco L.;
Cowan, Peter J.

Publication type:

Article

An objective ocean temperature and salinity analysis using covariances from a global climate model.

Published in:

Journal of Geophysical Research. Oceans, 2007, v. 112, n. C2, p. n/a, doi. 10.1029/2005JC003172

By:

Smith, Doug M.;
Murphy, James M.

Publication type:

Article

Unsupervised Diffusion and Volume Maximization-Based Clustering of Hyperspectral Images.

Published in:

Remote Sensing, 2023, v. 15, n. 4, p. 1053, doi. 10.3390/rs15041053

By:

Polk, Sam L.;
Cui, Kangning;
Chan, Aland H. Y.;
Coomes, David A.;
Plemmons, Robert J.;
Murphy, James M.

Publication type:

Article

Hyperspectral Image Clustering with Spatially-Regularized Ultrametrics.

Published in:

Remote Sensing, 2021, v. 13, n. 5, p. 955, doi. 10.3390/rs13050955

By:

Zhang, Shukun;
Murphy, James M.;
Zhang, Lefei

Publication type:

Article

American Radical: The Life and Times of I. F. Stone.

Published in:

2010

By:

Murphy, James M.

Publication type:

Book Review

Focal Adhesion Kinase Activity and Localization is Critical for TNF-α-Induced Nuclear Factor-κB Activation.

Published in:

Inflammation, 2021, v. 44, n. 3, p. 1130, doi. 10.1007/s10753-020-01408-5

By:

Murphy, James M.;
Jeong, Kyuho;
Cioffi, Donna L.;
Campbell, Pamela Moore;
Jo, Hanjoong;
Ahn, Eun-Young Erin;
Lim, Ssang-Taek Steve

Publication type:

Article

Utilizing DNA metabarcoding to characterize the diet of marine-phase Arctic lamprey (Lethenteron camtschaticum) in the eastern Bering Sea.

Published in:

Canadian Journal of Fisheries & Aquatic Sciences, 2019, v. 76, n. 11, p. 1993, doi. 10.1139/cjfas-2018-0299

By:

Shink, Katie G.;
Sutton, Trent M.;
Murphy, James M.;
López, J. Andrés

Publication type:

Article

Pulmonary Endothelial Tau Aggregation After Infection.

Published in:

FASEB Journal, 2022, v. 36, p. N.PAG, doi. 10.1096/fasebj.2022.36.S1.R4516

By:

Lin, Mike T.;
Choi, Chung‐Sik;
Gwin, Meredith;
Voth, Sarah;
Kolb, Claire;
Zhou, Chun;
Nelson, Amy R.;
deWeever, Althea;
Koloteva, Anna;
Annamdevula, Naga S.;
Murphy, James M.;
Wagener, Brant M.;
Pittet, Jean‐Francois;
Lim, Ssang‐Taek S.;
Balczon, Ron T.;
Stevens, Troy T.

Publication type:

Article

The evolving world of pseudoenzymes: proteins, prejudice and zombies.

Published in:

BMC Biology, 2016, v. 14, p. 1, doi. 10.1186/s12915-016-0322-x

By:

Eyers, Patrick A.;
Murphy, James M.

Publication type:

Article

Examining reliability of seasonal to decadal sea surface temperature forecasts: The role of ensemble dispersion.

Published in:

Geophysical Research Letters, 2013, v. 40, n. 21, p. 5770, doi. 10.1002/2013GL057630

By:

Ho, Chun Kit;
Hawkins, Ed;
Shaffrey, Len;
Bröcker, Jochen;
Hermanson, Leon;
Murphy, James M.;
Smith, Doug M.;
Eade, Rosie

Publication type:

Article

Do global warming targets limit heatwave risk?

Published in:

Geophysical Research Letters, 2010, v. 37, n. 17, p. n/a, doi. 10.1029/2010GL043898

By:

Clark, Robin T.;
Murphy, James M.;
Brown, Simon J.

Publication type:

Article

Quantification of modelling uncertainties in a large ensemble of climate change simulations.

Published in:

Nature, 2004, v. 430, n. 7001, p. 768, doi. 10.1038/nature02771

By:

Murphy, James M.;
Sexton, David M.H.;
Barnett, David N.;
Jones, Gareth S.;
Webb, Mark J.;
Collins, Matthew;
Stainforth, David A.

Publication type:

Article

GLIDER: function prediction from GLIDE-based neighborhoods.

Published in:

Bioinformatics, 2022, v. 38, n. 13, p. 3395, doi. 10.1093/bioinformatics/btac322

By:

Devkota, Kapil;
Schmidt, Henri;
Werenski, Matt;
Murphy, James M;
Erden, Mert;
Arsenescu, Victor;
Cowen, Lenore J

Publication type:

Article

THE USE OF NON-VERBAL AND BODY MOVEMENT TECHNIQUES IN WORKING WITH FAMILIES WITH INFANTS.

Published in:

Journal of Marital & Family Therapy, 1979, v. 5, n. 4, p. 61, doi. 10.1111/j.1752-0606.1979.tb01282.x

By:

Murphy, James M.

Publication type:

Article

Relative Aversion Thresholds for Shock in Infant Mice.

Published in:

Developmental Psychobiology, 1978, v. 11, n. 3, p. 261, doi. 10.1002/dev.420110310

By:

Nagy, Z. Michael;
Murphy, James M.;
Ray, Donald

Publication type:

Article

Development of NanoLuc-targeting protein degraders and a universal reporter system to benchmark tag-targeted degradation platforms.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-29670-1

By:

Grohmann, Christoph;
Magtoto, Charlene M.;
Walker, Joel R.;
Chua, Ngee Kiat;
Gabrielyan, Anna;
Hall, Mary;
Cobbold, Simon A.;
Mieruszynski, Stephen;
Brzozowski, Martin;
Simpson, Daniel S.;
Dong, Hao;
Dorizzi, Bridget;
Jacobsen, Annette V.;
Morrish, Emma;
Silke, Natasha;
Murphy, James M.;
Heath, Joan K.;
Testa, Andrea;
Maniaci, Chiara;
Ciulli, Alessio

Publication type:

Article

Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27032-x

By:

Meng, Yanxiang;
Davies, Katherine A.;
Fitzgibbon, Cheree;
Young, Samuel N.;
Garnish, Sarah E.;
Horne, Christopher R.;
Luo, Cindy;
Garnier, Jean-Marc;
Liang, Lung-Yu;
Cowan, Angus D.;
Samson, Andre L.;
Lessene, Guillaume;
Sandow, Jarrod J.;
Czabotar, Peter E.;
Murphy, James M.

Publication type:

Article

Structural and functional analysis of target recognition by the lymphocyte adaptor protein LNK.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26394-6

By:

Morris, Rhiannon;
Zhang, Yaoyuan;
Ellyard, Julia I.;
Vinuesa, Carola G.;
Murphy, James M.;
Laktyushin, Artem;
Kershaw, Nadia J.;
Babon, Jeffrey J.

Publication type:

Article

SON drives oncogenic RNA splicing in glioblastoma by regulating PTBP1/PTBP2 switching and RBFOX2 activity.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25892-x

By:

Kim, Jung-Hyun;
Jeong, Kyuho;
Li, Jianfeng;
Murphy, James M.;
Vukadin, Lana;
Stone, Joshua K.;
Richard, Alexander;
Tran, Johnny;
Gillespie, G. Yancey;
Flemington, Erik K.;
Sobol, Robert W.;
Lim, Ssang-Teak Steve;
Ahn, Eun-Young Erin

Publication type:

Article

The ubiquitylation of IL-1β limits its cleavage by caspase-1 and targets it for proteasomal degradation.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22979-3

By:

Vijayaraj, Swarna L.;
Feltham, Rebecca;
Rashidi, Maryam;
Frank, Daniel;
Liu, Zhengyang;
Simpson, Daniel S.;
Ebert, Gregor;
Vince, Angelina;
Herold, Marco J.;
Kueh, Andrew;
Pearson, Jaclyn S.;
Dagley, Laura F.;
Murphy, James M.;
Webb, Andrew I.;
Lawlor, Kate E.;
Vince, James E.

Publication type:

Article

Low-Temperature Thermal History Using Fission Track Dating in Three Wells in Southern Alaska Offshore Basins: Lower Cook Inlet, Shelikof Strait, and Stevenson Trough.

Published in:

Marine Georesources & Geotechnology, 1999, v. 17, n. 2/3, p. 271, doi. 10.1080/106411999273945

By:

M. Murphy, James G. Clough, John

Publication type:

Article

Analysis of the N-terminal region of human MLKL, as well as two distinct MLKL isoforms, reveals new insights into necroptotic cell death.

Published in:

Bioscience Reports, 2016, v. 36, n. 1, p. 1, doi. 10.1042/BSR20150246

By:

Arnež, Katja Hrovat;
Kindlova, Michaela;
Bokil, Nilesh J.;
Murphy, James M.;
Sweet, Matthew J.;
Gunčar, Gregor

Publication type:

Article

Evidence for Size-Selective Mortality after the First Summer of Ocean Growth by Pink Salmon.

Published in:

Transactions of the American Fisheries Society, 2005, v. 134, n. 5, p. 1313, doi. 10.1577/T05-054.1

By:

Moss, Jamal H.;
Beauchamp, David A.;
Cross, Alison D.;
Myers, Katherine W.;
Farley, Jr, Edward V.;
Murphy, James M.;
Helle, John H.

Publication type:

Article

Intracranial Self-Administration of Ethanol within the Ventral Tegmental Area of Male Wistar Rats: Evidence for Involvement of Dopamine Neurons.

Published in:

Journal of Neuroscience, 2004, v. 24, n. 5, p. 1050, doi. 10.1523/JNEUROSCI.1319-03.2004

By:

Rodd, Zachary A.;
Melendez, Roberto I.;
Bell, Richard L.;
Kuc, Kelly A.;
Ying Zhang;
Murphy, James M.;
McBride, William J.

Publication type:

Article

Necroptosis Signalling Promotes Inflammation, Airway Remodelling and Emphysema in COPD.

Published in:

2021

By:

Zhe Lu;
Van Eeckhoutte, Hannelore P.;
Gang Liu;
Nair, Prema M.;
Jones, Bernadette;
Gillis, Caitlin M.;
Nalkurthi, B. Christina;
Verhamme, Fien;
Buyle-Huybrecht, Tamariche;
Vandenabeele, Peter;
Berghe, Tom Vanden;
Brusselle, Guy G.;
Horvat, Jay C.;
Murphy, James M.;
Wark, Peter A.;
Bracke, Ken R.;
Fricker, Michael;
Hansbro, Philip M.;
Lu, Zhe;
Liu, Gang

Publication type:

journal article

Lymphotoxin α induces apoptosis, necroptosis and inflammatory signals with the same potency as tumour necrosis factor.

Published in:

FEBS Journal, 2013, v. 280, n. 21, p. 5283, doi. 10.1111/febs.12419

By:

Etemadi, Nima;
Holien, Jessica K.;
Chau, Diep;
Dewson, Grant;
Murphy, James M.;
Alexander, Warren S.;
Parker, Michael W.;
Silke, John;
Nachbur, Ueli

Publication type:

Article

The pseudokinase MLKL mediates programmed hepatocellular necrosis independently of RIPK3 during hepatitis.

Published in:

2016

By:

Günther, Claudia;
Gui-Wei He;
Kremer, Andreas E.;
Murphy, James M.;
Petrie, Emma J.;
Amann, Kerstin;
Vandenabeele, Peter;
Linkermann, Andreas;
Poremba, Christopher;
Schleicher, Ulrike;
Dewitz, Christin;
Krautwald, Stefan;
Neurath, Markus F.;
Becker, Christoph;
Wirtz, Stefan;
He, Gui-Wei

Publication type:

journal article

Add necroptosis to your asthma action plan.

Published in:

Immunology & Cell Biology, 2021, v. 99, n. 8, p. 800, doi. 10.1111/imcb.12489

By:

Garnish, Sarah E;
Tovey Crutchfield, Emma C;
Murphy, James M;
Hildebrand, Joanne M

Publication type:

Article

Insane in the membrane: a structural perspective of MLKL function in necroptosis.

Published in:

Immunology & Cell Biology, 2017, v. 95, n. 2, p. 152, doi. 10.1038/icb.2016.125

By:

Petrie, Emma J;
Hildebrand, Joanne M;
Murphy, James M

Publication type:

Article

Mitogen-activated Tasmanian devil blood mononuclear cells kill devil facial tumour disease cells.

Published in:

Immunology & Cell Biology, 2016, v. 94, n. 7, p. 673, doi. 10.1038/icb.2016.38

By:

Brown, Gabriella K;
Tovar, Cesar;
Cooray, Anne A;
Kreiss, Alexandre;
Darby, Jocelyn;
Murphy, James M;
Corcoran, Lynn M;
Bettiol, Silvana S;
Lyons, A Bruce;
Woods, Gregory M

Publication type:

Article

A Quantitative Method to Measure Low Levels of ROS in Nonphagocytic Cells by Using a Chemiluminescent Imaging System.

Published in:

Oxidative Medicine & Cellular Longevity, 2019, p. 1, doi. 10.1155/2019/1754593

By:

Kim, Jun-Sub;
Jeong, Kyuho;
Murphy, James M.;
Rodriguez, Yelitza A. R.;
Lim, Ssang-Taek Steve

Publication type:

Article

FAK in the nucleus prevents VSMC proliferation by promoting p27 and p21 expression via Skp2 degradation.

Published in:

Cardiovascular Research, 2022, v. 118, n. 4, p. 1150, doi. 10.1093/cvr/cvab132

By:

Jeong, Kyuho;
Murphy, James M;
Ahn, Eun-Young Erin;
Lim, Ssang-Taek Steve

Publication type:

Article

FAK Family Kinases in Vascular Diseases.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 10, p. 3630, doi. 10.3390/ijms21103630

By:

Murphy, James M.;
Jeong, Kyuho;
Lim, Ssang-Taek Steve

Publication type:

Article

Targeting focal adhesion kinase in cancer cells and the tumor microenvironment.

Published in:

Experimental & Molecular Medicine EMM, 2020, v. 52, n. 6, p. 877, doi. 10.1038/s12276-020-0447-4

By:

Murphy, James M.;
Rodriguez, Yelitza A. R.;
Jeong, Kyuho;
Ahn, Eun-Young Erin;
Lim, Ssang-Taek Steve

Publication type:

Article

Alcoholism: Is It a Model for the Study of Disorders of Mood and Consummately Behavior?a.

Published in:

Annals of the New York Academy of Sciences, 1987, v. 499, n. 1, p. 239, doi. 10.1111/j.1749-6632.1987.tb36215.x

By:

LI, TING-KAI;
LUMENG, LAWRENCE;
McBRIDE, WILLIAM J.;
MURPHY, JAMES M.

Publication type:

Article

A theoretical guarantee for data completion via geometric separation.

Published in:

PAMM: Proceedings in Applied Mathematics & Mechanics, 2017, v. 17, n. 1, p. 833, doi. 10.1002/pamm.201710384

By:

King, Emily J.;
Murphy, James M.

Publication type:

Article

Correction to: Evaluation of a new 12 km regional perturbed parameter ensemble over Europe.

Published in:

2022

By:

Tucker, Simon O.;
Kendon, Elizabeth J.;
Bellouin, Nicolas;
Buonomo, Erasmo;
Johnson, Ben;
Murphy, James M.

Publication type:

Correction Notice

Evaluation of a new 12 km regional perturbed parameter ensemble over Europe.

Published in:

Climate Dynamics, 2022, v. 58, n. 3/4, p. 879, doi. 10.1007/s00382-021-05941-3

By:

Tucker, Simon O.;
Kendon, Elizabeth J.;
Bellouin, Nicolas;
Buonomo, Erasmo;
Johnson, Ben;
Murphy, James M.

Publication type:

Article

A perturbed parameter ensemble of HadGEM3-GC3.05 coupled model projections: part 1: selecting the parameter combinations.

Published in:

Climate Dynamics, 2021, v. 56, n. 11/12, p. 3395, doi. 10.1007/s00382-021-05709-9

By:

Sexton, David M. H.;
McSweeney, Carol F.;
Rostron, John W.;
Yamazaki, Kuniko;
Booth, Ben B. B.;
Murphy, James M.;
Regayre, Leighton;
Johnson, Jill S.;
Karmalkar, Ambarish V.

Publication type:

Article

A perturbed parameter ensemble of HadGEM3-GC3.05 coupled model projections: part 2: global performance and future changes.

Published in:

Climate Dynamics, 2021, v. 56, n. 11/12, p. 3437, doi. 10.1007/s00382-020-05608-5

By:

Yamazaki, Kuniko;
Sexton, David M. H.;
Rostron, John W.;
McSweeney, Carol F.;
Murphy, James M.;
Harris, Glen R.

Publication type:

Article

Finding plausible and diverse variants of a climate model. Part II: development and validation of methodology.

Published in:

Climate Dynamics, 2019, v. 53, n. 1/2, p. 847, doi. 10.1007/s00382-019-04617-3

By:

Karmalkar, Ambarish V.;
Sexton, David M. H.;
Murphy, James M.;
Booth, Ben B. B.;
Rostron, John W.;
McNeall, Doug J.

Publication type:

Article

Interactions between perturbations to different Earth system components simulated by a fully-coupled climate model.

Published in:

Climate Dynamics, 2013, v. 41, n. 11/12, p. 3055, doi. 10.1007/s00382-012-1618-3

By:

Lambert, F. Hugo;
Harris, Glen R.;
Collins, Matthew;
Murphy, James M.;
Sexton, David M. H.;
Booth, Ben B. B.

Publication type:

Article

Towards quantifying uncertainty in transient climate change.

Published in:

Climate Dynamics, 2006, v. 27, n. 2/3, p. 127, doi. 10.1007/s00382-006-0121-0

By:

Collins, Matthew;
Booth, Ben B. B.;
Harris, Glen R.;
Murphy, James M.;
Sexton, David M. H.;
Webb, Mark J.

Publication type:

Article

Quantifying uncertainty in changes in extreme event frequency in response to doubled CO<sub>2</sub> using a large ensemble of GCM simulations.

Published in:

Climate Dynamics, 2006, v. 26, n. 5, p. 489, doi. 10.1007/s00382-005-0097-1

By:

Barnett, David N.;
Brown, Simon J.;
Murphy, James M.;
Sexton, David M. H.;
Webb, Mark J.

Publication type:

Article

Caspase‐8‐driven apoptotic and pyroptotic crosstalk causes cell death and IL‐1β release in X‐linked inhibitor of apoptosis (XIAP) deficiency.

Published in:

EMBO Journal, 2023, v. 42, n. 5, p. 1, doi. 10.15252/embj.2021110468

By:

Hughes, Sebastian A;
Lin, Meng;
Weir, Ashley;
Huang, Bing;
Xiong, Liya;
Chua, Ngee Kiat;
Pang, Jiyi;
Santavanond, Jascinta P;
Tixeira, Rochelle;
Doerflinger, Marcel;
Deng, Yexuan;
Yu, Chien‐Hsiung;
Silke, Natasha;
Conos, Stephanie A;
Frank, Daniel;
Simpson, Daniel S;
Murphy, James M;
Lawlor, Kate E;
Pearson, Jaclyn S;
Silke, John

Publication type:

Article

Oligomerization‐driven MLKL ubiquitylation antagonizes necroptosis.

Published in:

EMBO Journal, 2021, v. 40, n. 23, p. 1, doi. 10.15252/embj.2019103718

By:

Liu, Zikou;
Dagley, Laura F;
Shield‐Artin, Kristy;
Young, Samuel N;
Bankovacki, Aleksandra;
Wang, Xiangyi;
Tang, Michelle;
Howitt, Jason;
Stafford, Che A;
Nachbur, Ueli;
Fitzgibbon, Cheree;
Garnish, Sarah E;
Webb, Andrew I;
Komander, David;
Murphy, James M;
Hildebrand, Joanne M;
Silke, John

Publication type:

Article

GLIDE: combining local methods and diffusion state embeddings to predict missing interactions in biological networks.

Published in:

Bioinformatics, 2020, v. 36, p. i464, doi. 10.1093/bioinformatics/btaa459

By:

Devkota, Kapil;
Murphy, James M.;
Cowen, Lenore J.

Publication type:

Article

Functional characterization of c-Mpl ectodomain mutations that underlie congenital amegakaryocytic thrombocytopenia.

Published in:

Growth Factors, 2014, v. 32, n. 1, p. 18, doi. 10.3109/08977194.2013.874347

By:

Varghese, Leila N.;
Zhang, Jian-Guo;
Young, Samuel N.;
Willson, Tracy A.;
Alexander, Warren S.;
Nicola, Nicos A.;
Babon, Jeffrey J.;
Murphy, James M.

Publication type:

Article

A convenient method for preparation of an engineered mouse interleukin-3 analog with high solubility and wild-type bioactivity.

Published in:

Growth Factors, 2010, v. 28, n. 2, p. 104, doi. 10.3109/08977190903443048

By:

Murphy, James M.;
Metcalf, Donald;
Young, Ian G.;
Hilton, Douglas J.

Publication type:

Article

FAK and Pyk2 activity promote TNF-α and IL-1β-mediated pro-inflammatory gene expression and vascular inflammation.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-44098-2

By:

Murphy, James M.;
Jeong, Kyuho;
Rodriguez, Yelitza A. R.;
Kim, Jung-Hyun;
Ahn, Eun-Young Erin;
Lim, Ssang-Taek Steve

Publication type:

Article