Found: 19

Select item for more details and to access through your institution.

  • A Scalable Strand-Specific Protocol Enabling Full-Length Total RNA Sequencing From Single Cells.

    Published in:
    Frontiers in Genetics, 2021, v. 11, p. 1, doi. 10.3389/fgene.2021.665888
    By:
    • Haile, Simon;
    • Corbett, Richard D.;
    • LeBlanc, Veronique G.;
    • Wei, Lisa;
    • Pleasance, Stephen;
    • Bilobram, Steve;
    • Nip, Ka Ming;
    • Brown, Kirstin;
    • Trinh, Eva;
    • Smith, Jillian;
    • Trinh, Diane L.;
    • Bala, Miruna;
    • Chuah, Eric;
    • Coope, Robin J. N.;
    • Moore, Richard A.;
    • Mungall, Andrew J.;
    • Mungall, Karen L.;
    • Zhao, Yongjun;
    • Hirst, Martin;
    • Aparicio, Samuel
    Publication type:
    Article

  • A Distributed Whole Genome Sequencing Benchmark Study.

    Published in:
    Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.612515
    By:
    • Corbett, Richard D.;
    • Eveleigh, Robert;
    • Whitney, Joe;
    • Barai, Namrata;
    • Bourgey, Mathieu;
    • Chuah, Eric;
    • Johnson, Joanne;
    • Moore, Richard A.;
    • Moradin, Neda;
    • Mungall, Karen L.;
    • Pereira, Sergio;
    • Reuter, Miriam S.;
    • Thiruvahindrapuram, Bhooma;
    • Wintle, Richard F.;
    • Ragoussis, Jiannis;
    • Strug, Lisa J.;
    • Herbrick, Jo-Anne;
    • Aziz, Naveed;
    • Jones, Steven J. M.;
    • Lathrop, Mark
    Publication type:
    Article

  • A platform for oncogenomic reporting and interpretation.

    Published in:
    Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-28348-y
    By:
    • Reisle, Caralyn;
    • Williamson, Laura M.;
    • Pleasance, Erin;
    • Davies, Anna;
    • Pellegrini, Brayden;
    • Bleile, Dustin W.;
    • Mungall, Karen L.;
    • Chuah, Eric;
    • Jones, Martin R.;
    • Ma, Yussanne;
    • Lewis, Eleanor;
    • Beckie, Isaac;
    • Pham, David;
    • Matiello Pletz, Raphael;
    • Muhammadzadeh, Amir;
    • Pierce, Brandon M.;
    • Li, Jacky;
    • Stevenson, Ross;
    • Wong, Hansen;
    • Bailey, Lance
    Publication type:
    Article

  • A clinical transcriptome approach to patient stratification and therapy selection in acute myeloid leukemia.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22625-y
    By:
    • Docking, T. Roderick;
    • Parker, Jeremy D. K.;
    • Jädersten, Martin;
    • Duns, Gerben;
    • Chang, Linda;
    • Jiang, Jihong;
    • Pilsworth, Jessica A.;
    • Swanson, Lucas A.;
    • Chan, Simon K.;
    • Chiu, Readman;
    • Nip, Ka Ming;
    • Mar, Samantha;
    • Mo, Angela;
    • Wang, Xuan;
    • Martinez-Høyer, Sergio;
    • Stubbins, Ryan J.;
    • Mungall, Karen L.;
    • Mungall, Andrew J.;
    • Moore, Richard A.;
    • Jones, Steven J. M.
    Publication type:
    Article

  • The transcriptional landscape of Shh medulloblastoma.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21883-0
    By:
    • Skowron, Patryk;
    • Farooq, Hamza;
    • Cavalli, Florence M. G.;
    • Morrissy, A. Sorana;
    • Ly, Michelle;
    • Hendrikse, Liam D.;
    • Wang, Evan Y.;
    • Djambazian, Haig;
    • Zhu, Helen;
    • Mungall, Karen L.;
    • Trinh, Quang M.;
    • Zheng, Tina;
    • Dai, Shizhong;
    • Stucklin, Ana S. Guerreiro;
    • Vladoiu, Maria C.;
    • Fong, Vernon;
    • Holgado, Borja L.;
    • Nor, Carolina;
    • Wu, Xiaochong;
    • Abd-Rabbo, Diala
    Publication type:
    Article

  • Complete genomic landscape of a recurring sporadic parathyroid carcinoma.

    Published in:
    Journal of Pathology, 2013, v. 230, n. 3, p. 249, doi. 10.1002/path.4203
    By:
    • Kasaian, Katayoon;
    • Wiseman, Sam M;
    • Thiessen, Nina;
    • Mungall, Karen L;
    • Corbett, Richard D;
    • Qian, Jenny Q;
    • Nip, Ka Ming;
    • He, Ann;
    • Tse, Kane;
    • Chuah, Eric;
    • Varhol, Richard J;
    • Pandoh, Pawan;
    • McDonald, Helen;
    • Zeng, Thomas;
    • Tam, Angela;
    • Schein, Jacquie;
    • Birol, Inanc;
    • Mungall, Andrew J;
    • Moore, Richard A;
    • Zhao, Yongjun
    Publication type:
    Article

  • Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica.

    Published in:
    Nature Genetics, 2003, v. 35, n. 1, p. 32, doi. 10.1038/ng1227
    By:
    • Parkhill, Julian;
    • Sebaihia, Mohammed;
    • Preston, Andrew;
    • Murphy, Lee D.;
    • Thomson, Nicholas;
    • Harris, David E.;
    • Holden, Matthew T. G.;
    • Churcher, Carol M.;
    • Bentley, Stephen D.;
    • Mungall, Karen L.;
    • Cerdeño-Tárraga, Ana M.;
    • Temple, Louise;
    • James, Keith;
    • Harris, Barbara;
    • Quail, Michael A.;
    • Achtman, Mark;
    • Atkin, Rebecca;
    • Baker, Steven;
    • Basham, David;
    • Bason, Nathalie
    Publication type:
    Article

  • MEN1 mutations in Hürthle cell (oncocytic) thyroid carcinoma.

    Published in:
    2015
    By:
    • Kasaian, Katayoon;
    • Chindris, Ana-Maria;
    • Wiseman, Sam M;
    • Mungall, Karen L;
    • Zeng, Thomas;
    • Tse, Kane;
    • Schein, Jacqueline E;
    • Rivera, Michael;
    • Necela, Brian M;
    • Kachergus, Jennifer M;
    • Casler, John D;
    • Mungall, Andrew J;
    • Moore, Richard A;
    • Marra, Marco A;
    • Copland, John A;
    • Thompson, E Aubrey;
    • Smallridge, Robert C;
    • Jones, Steven J M
    Publication type:
    journal article

  • Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma.

    Published in:
    Nature, 2011, v. 476, n. 7360, p. 298, doi. 10.1038/nature10351
    By:
    • Morin, Ryan D.;
    • Mendez-Lago, Maria;
    • Mungall, Andrew J.;
    • Goya, Rodrigo;
    • Mungall, Karen L.;
    • Corbett, Richard D.;
    • Johnson, Nathalie A.;
    • Severson, Tesa M.;
    • Chiu, Readman;
    • Field, Matthew;
    • Jackman, Shaun;
    • Krzywinski, Martin;
    • Scott, David W.;
    • Trinh, Diane L.;
    • Tamura-Wells, Jessica;
    • Li, Sa;
    • Firme, Marlo R.;
    • Rogic, Sanja;
    • Griffith, Malachi;
    • Chan, Susanna
    Publication type:
    Article

  • Enhancing clinical genomic accuracy with panelGC: a novel metric and tool for quantifying and monitoring GC biases in hybridization capture panel sequencing.

    Published in:
    Briefings in Bioinformatics, 2024, v. 25, n. 5, p. 1, doi. 10.1093/bib/bbae442
    By:
    • Cheng, Xuanjin;
    • Goktas, Murathan T;
    • Williamson, Laura M;
    • Krzywinski, Martin;
    • Mulder, David T;
    • Swanson, Lucas;
    • Slind, Jill;
    • Sihvonen, Jelena;
    • Chow, Cynthia R;
    • Carr, Amy;
    • Bosdet, Ian;
    • Tucker, Tracy;
    • Young, Sean;
    • Moore, Richard;
    • Mungall, Karen L;
    • Yip, Stephen;
    • Jones, Steven J M
    Publication type:
    Article

  • Genomic analyses identify recurrent MEF2D fusions in acute lymphoblastic leukaemia.

    Published in:
    Nature Communications, 2016, v. 7, n. 11, p. 13331, doi. 10.1038/ncomms13331
    By:
    • Gu, Zhaohui;
    • Churchman, Michelle;
    • Roberts, Kathryn;
    • Li, Yongjin;
    • Liu, Yu;
    • Harvey, Richard C.;
    • McCastlain, Kelly;
    • Reshmi, Shalini C.;
    • Payne-Turner, Debbie;
    • Iacobucci, Ilaria;
    • Shao, Ying;
    • Chen, I-Ming;
    • Valentine, Marcus;
    • Pei, Deqing;
    • Mungall, Karen L.;
    • Mungall, Andrew J.;
    • Ma, Yussanne;
    • Moore, Richard;
    • Marra, Marco;
    • Stonerock, Eileen
    Publication type:
    Article

  • Comprehensive whole genome sequence analyses yields novel genetic and structural insights for Intellectual Disability.

    Published in:
    BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3671-0
    By:
    • Zahir, Farah R.;
    • Mwenifumbo, Jill C.;
    • Chun, Hye-Jung E.;
    • Lim, Emilia L.;
    • Van Karnebeek, Clara D. M.;
    • Couse, Madeline;
    • Mungall, Karen L.;
    • Lee, Leora;
    • Makela, Nancy;
    • Armstrong, Linlea;
    • Boerkoel, Cornelius F.;
    • Langlois, Sylvie L.;
    • McGillivray, Barbara M.;
    • Jones, Steven J. M.;
    • Friedman, Jan M.;
    • Marra, Marco A.
    Publication type:
    Article

  • Whole genome and whole transcriptome genomic profiling of a metastatic eccrine porocarcinoma.

    Published in:
    NPJ Precision Oncology, 2018, v. 2, n. 1, p. N.PAG, doi. 10.1038/s41698-018-0050-5
    By:
    • Thibodeau, My Linh;
    • Bonakdar, Melika;
    • Zhao, Eric;
    • Mungall, Karen L.;
    • Reisle, Caralyn;
    • Zhang, Wei;
    • Bye, Morgan H.;
    • Thiessen, Nina;
    • Bleile, Dustin;
    • Mungall, Andrew J.;
    • Ma, Yussanne P.;
    • Jones, Martin R.;
    • Renouf, Daniel J.;
    • Lim, Howard J.;
    • Yip, Stephen;
    • Ng, Tony;
    • Ho, Cheryl;
    • Laskin, Janessa;
    • Marra, Marco A.;
    • Schrader, Kasmintan A.
    Publication type:
    Article

  • The Genome of the Beluga Whale (Delphinapterus leucas).

    Published in:
    Genes, 2017, v. 8, n. 12, p. 378, doi. 10.3390/genes8120378
    By:
    • Jones, Steven J. M.;
    • Taylor, Gregory A.;
    • Chan, Simon;
    • Warren, René L.;
    • Hammond, S. Austin;
    • Bilobram, Steven;
    • Mordecai, Gideon;
    • Suttle, Curtis A.;
    • Miller, Kristina M.;
    • Schulze, Angela;
    • Chan, Amy M.;
    • Jones, Samantha J.;
    • Tse, Kane;
    • Li, Irene;
    • Cheung, Dorothy;
    • Mungall, Karen L.;
    • Choo, Caleb;
    • Ally, Adrian;
    • Dhalla, Noreen;
    • Tam, Angela K. Y.
    Publication type:
    Article

  • The Genome of the Northern Sea Otter (Enhydra lutris kenyoni).

    Published in:
    Genes, 2017, v. 8, n. 12, p. 379, doi. 10.3390/genes8120379
    By:
    • Jones, Samantha J.;
    • Haulena, Martin;
    • Taylor, Gregory A.;
    • Simon Chan;
    • Bilobram, Steven;
    • Warren, René L.;
    • Austin Hammond, S.;
    • Mungall, Karen L.;
    • Caleb Choo;
    • Kirk, Heather;
    • Pandoh, Pawan;
    • Ally, Adrian;
    • Dhalla, Noreen;
    • Tam, Angela K. Y.;
    • Troussard, Armelle;
    • Paulino, Daniel;
    • Coope, Robin J. N.;
    • Mungall, Andrew J.;
    • Moore, Richard;
    • Yongjun Zhao
    Publication type:
    Article

  • Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies.

    Published in:
    BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-550
    By:
    • Swanson, Lucas;
    • Robertson, Gordon;
    • Mungall, Karen L.;
    • Butterfield, Yaron S.;
    • Chiu, Readman;
    • Corbett, Richard D.;
    • Roderick Docking, T.;
    • Hogge, Donna;
    • Jackman, Shaun D.;
    • Moore, Richard A.;
    • Mungall, Andrew J.;
    • Nip, Ka Ming;
    • Parker, Jeremy D. K.;
    • Qian, Jenny Qing;
    • Raymond, Anthony;
    • Sung, Sandy;
    • Tam, Angela;
    • Thiessen, Nina;
    • Varhol, Richard;
    • Wang, Sherry
    Publication type:
    Article

  • Genomic and Cytogenetic Characterization of a Balanced Translocation Disrupting NUP98.

    Published in:
    Cytogenetic & Genome Research, 2017, v. 152, n. 3, p. 117, doi. 10.1159/000479463
    By:
    • Thibodeau, My Linh;
    • Steinraths, Michelle;
    • Brown, Lindsay;
    • Zong, Zheyuan;
    • Shomer, Naomi;
    • Taubert, Stefan;
    • Mungall, Karen L.;
    • Ma, Yussanne P.;
    • Mueller, Rosemary;
    • Birol, Inanc;
    • Lehman, anna
    Publication type:
    Article

  • MAVIS: merging, annotation, validation, and illustration of structural variants.

    Published in:
    Bioinformatics, 2019, v. 35, n. 3, p. 515, doi. 10.1093/bioinformatics/bty621
    By:
    • Reisle, Caralyn;
    • Mungall, Karen L;
    • Choo, Caleb;
    • Paulino, Daniel;
    • Bleile, Dustin W;
    • Muhammadzadeh, Amir;
    • Mungall, Andrew J;
    • Moore, Richard A;
    • Shlafman, Inna;
    • Coope, Robin;
    • Pleasance, Stephen;
    • Ma, Yussanne;
    • Jones, Steven J M
    Publication type:
    Article

  • BreakFusion: targeted assembly-based identification of gene fusions in whole transcriptome paired-end sequencing data.

    Published in:
    Bioinformatics, 2012, v. 28, n. 14, p. 1923, doi. 10.1093/bioinformatics/bts272
    By:
    • Chen, Ken;
    • Wallis, John W.;
    • Kandoth, Cyriac;
    • Kalicki−Veizer, Joelle M.;
    • Mungall, Karen L.;
    • Mungall, Andrew J.;
    • Jones, Steven J.;
    • Marra, Marco A.;
    • Ley, Timothy J.;
    • Mardis, Elaine R.;
    • Wilson, Richard K.;
    • Weinstein, John N.;
    • Ding, Li
    Publication type:
    Article