Works by Motorin, Yuri

Results: 77

Holistic Optimization of Bioinformatic Analysis Pipeline for Detection and Quantification of 2′-O-Methylations in RNA by RiboMethSeq.

Published in:

Frontiers in Genetics, 2020, p. 1, doi. 10.3389/fgene.2020.00038

By:

Pichot, Florian;
Marchand, Virginie;
Ayadi, Lilia;
Bourguignon-Igel, Valérie;
Helm, Mark;
Motorin, Yuri

Publication type:

Article

A bifunctional snoRNA with separable activities in guiding rRNA 2'-O-methylation and scaffolding gametogenesis effectors.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-58664-y

By:

Leroy, Estelle;
Challal, Drice;
Pelletier, Stéphane;
Goncalves, Coralie;
Menant, Alexandra;
Marchand, Virginie;
Jaszczyszyn, Yan;
van Dijk, Erwin;
Naquin, Delphine;
Andreani, Jessica;
Motorin, Yuri;
Palancade, Benoit;
Rougemaille, Mathieu

Publication type:

Article

Selective RNA pseudouridinylation in situ by circular gRNAs in designer organelles.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53403-1

By:

Schartel, Lukas;
Jann, Cosimo;
Wierczeiko, Anna;
Butto, Tamer;
Mündnich, Stefan;
Marchand, Virginie;
Motorin, Yuri;
Helm, Mark;
Gerber, Susanne;
Lemke, Edward A.

Publication type:

Article

Détection et fonctions des modifications de l'ARN viral : perspectives en biologie et en médecine.

Published in:

Virologie, 2021, v. 25, n. 2, p. 93, doi. 10.1684/vir.2021.0899

By:

Marchand, Virginie;
Motorin, Yuri

Publication type:

Article

Detection and functions of viral RNA modifications: perspectives in biology and medicine.

Published in:

Virologie, 2021, v. 25, n. 2, p. 5, doi. 10.1684/vir.2021.0884

By:

Marchand, Virginie;
Motorin, Yuri

Publication type:

Article

Absolute Quantifizierung nicht‐kodierender RNA‐Spezies mittels Mikroskala‐Thermophorese.

Published in:

Angewandte Chemie, 2019, v. 131, n. 28, p. 9666, doi. 10.1002/ange.201814377

By:

Jacob, Dominik;
Thüring, Kathrin;
Galliot, Aurellia;
Marchand, Virginie;
Galvanin, Adeline;
Ciftci, Akif;
Scharmann, Karin;
Stock, Michael;
Roignant, Jean‐Yves;
Leidel, Sebastian A.;
Motorin, Yuri;
Schaffrath, Raffael;
Klassen, Roland;
Helm, Mark

Publication type:

Article

AlkAniline‐Seq: Profiling of m7G and m3C RNA Modifications at Single Nucleotide Resolution.

Published in:

Angewandte Chemie, 2018, v. 130, n. 51, p. 17027, doi. 10.1002/ange.201810946

By:

Marchand, Virginie;
Ayadi, Lilia;
Ernst, Felix G. M.;
Hertler, Jasmin;
Bourguignon‐Igel, Valérie;
Galvanin, Adeline;
Kotter, Annika;
Helm, Mark;
Lafontaine, Denis L. J.;
Motorin, Yuri

Publication type:

Article

The ribose methylation enzyme FTSJ1 has a conserved role in neuron morphology and learning performance.

Published in:

Life Science Alliance, 2023, v. 6, n. 4, p. 1, doi. 10.26508/lsa.202201877

By:

Brazane, Mira;
Dimitrova, Dilyana G.;
Pigeon, Julien;
Paolantoni, Chiara;
Tao Ye;
Marchand, Virginie;
Da Silva, Bruno;
Schaefer, Elise;
Angelova, Margarita T.;
Stark, Zornitza;
Delatycki, Martin;
Dudding-Byth, Tracy;
Gecz, Jozef;
Plaçais, Pierre-Yves;
Teysset, Laure;
Préat, Thomas;
Piton, Amélie;
Hassan, Bassem A.;
Roignant, Jean-Yves;
Motorin, Yuri

Publication type:

Article

A multifunctional bioconjugate module for versatile photoaffinity labeling and click chemistry of RNA.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 16, p. 7348, doi. 10.1093/nar/gkr449

By:

Kellner, Stefanie;
Seidu-Larry, Salifu;
Burhenne, Jürgen;
Motorin, Yuri;
Helm, Mark

Publication type:

Article

Expanding the chemical scope of RNA:methyltransferases to site-specific alkynylation of RNA for click labeling.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 5, p. 1943, doi. 10.1093/nar/gkq825

By:

Motorin, Yuri;
Burhenne, Jürgen;
Teimer, Roman;
Koynov, Kaloian;
Willnow, Sophie;
Weinhold, Elmar;
Helm, Mark

Publication type:

Article

5-methylcytosine in RNA: detection, enzymatic formation and biological functions.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 5, p. 1415, doi. 10.1093/nar/gkp1117

By:

Motorin, Yuri;
Lyko, Frank;
Helm, Mark

Publication type:

Article

Deficiency of the tRNATyr:Ψ35-synthase aPus7 in Archaea of the Sulfolobales order might be rescued by the H/ACA sRNA-guided machinery.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 4, p. 1308, doi. 10.1093/nar/gkn1037

By:

Muller, Sébastien;
Urban, Alan;
Hecker, Arnaud;
Leclerc, Fabrice;
Branlant, Christiane;
Motorin, Yuri

Publication type:

Article

Constitutive and variable 2'-O-methylation (Nm) in human ribosomal RNA.

Published in:

RNA Biology, 2023, v. 18, p. 88, doi. 10.1080/15476286.2021.1974750

By:

Motorin, Yuri;
Quinternet, Marc;
Rhalloussi, Wassim;
Marchand, Virginie

Publication type:

Article

Constitutive and variable 2'-O-methylation (Nm) in human ribosomal RNA.

Published in:

RNA Biology, 2021, v. 18, p. 88, doi. 10.1080/15476286.2021.1974750

By:

Motorin, Yuri;
Quinternet, Marc;
Rhalloussi, Wassim;
Marchand, Virginie

Publication type:

Article

Constitutive and variable 2'-O-methylation (Nm) in human ribosomal RNA.

Published in:

RNA Biology, 2021, v. 18, p. 88, doi. 10.1080/15476286.2021.1974750

By:

Motorin, Yuri;
Quinternet, Marc;
Rhalloussi, Wassim;
Marchand, Virginie

Publication type:

Article

Positioning Europe for the EPITRANSCRIPTOMICS challenge.

Published in:

RNA Biology, 2018, v. 15, n. 6, p. 829, doi. 10.1080/15476286.2018.1460996

By:

Jantsch, Michael F.;
Quattrone, Alessandro;
O'Connell, Mary;
Helm, Mark;
Frye, Michaela;
Macias-Gonzales, Manuel;
Ohman, Marie;
Ameres, Stefan;
Willems, Luc;
Fuks, Francois;
Oulas, Anastasis;
Vanacova, Stepanka;
Nielsen, Henrik;
Bousquet-Antonelli, Cecile;
Motorin, Yuri;
Roignant, Jean-Yves;
Balatsos, Nikolaos;
Dinnyes, Andras;
Baranov, Pavel;
Kelly, Vincent

Publication type:

Article

Next-generation sequencing technologies for detection of modified nucleotides in RNAs.

Published in:

RNA Biology, 2017, v. 14, n. 9, p. 1124, doi. 10.1080/15476286.2016.1251543

By:

Schwartz, Schraga;
Motorin, Yuri

Publication type:

Article

FUS regulates a subset of snoRNA expression and modulates the level of rRNA modifications.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-30068-2

By:

Gawade, Kishor;
Plewka, Patrycja;
Häfner, Sophia J.;
Lund, Anders H.;
Marchand, Virginie;
Motorin, Yuri;
Szczesniak, Michal W.;
Raczynska, Katarzyna D.

Publication type:

Article

NICOTIANAMINE SYNTHASE activity affects nucleolar iron accumulation and impacts rDNA silencing and RNA methylation in Arabidopsis.

Published in:

Journal of Experimental Botany, 2023, v. 74, n. 15, p. 4384, doi. 10.1093/jxb/erad180

By:

Montacié, Charlotte;
Riondet, Christophe;
Wei, Lili;
Darrière, Tommy;
Weiss, Alizée;
Pontvianne, Frédéric;
Escande, Marie-Line;
Bures, Anne de;
Jobet, Edouard;
Barbarossa, Adrien;
Carpentier, Marie-Christine;
Aarts, Mark G M;
Attina, Aurore;
Hirtz, Christophe;
David, Alexandre;
Marchand, Virginie;
Motorin, Yuri;
Curie, Catherine;
Mari, Stéphane;
Reichheld, Jean-Philippe

Publication type:

Article

Non-Specific Binding, a Limitation of the Immunofluorescence Method to Study Macrophages In Situ.

Published in:

Genes, 2021, v. 12, n. 5, p. 649, doi. 10.3390/genes12050649

By:

Sicherre, Emma;
Favier, Anne-Laure;
Riccobono, Diane;
Nikovics, Krisztina;
Motorin, Yuri A.

Publication type:

Article

Analysis of RNA Modifications by Second- and Third-Generation Deep Sequencing: 2020 Update.

Published in:

Genes, 2021, v. 12, n. 2, p. 278, doi. 10.3390/genes12020278

By:

Motorin, Yuri;
Marchand, Virginie;
Tisne, Carine

Publication type:

Article

Non-Redundant tRNA Reference Sequences for Deep Sequencing Analysis of tRNA Abundance and Epitranscriptomic RNA Modifications.

Published in:

Genes, 2021, v. 12, n. 1, p. 81, doi. 10.3390/genes12010081

By:

PICHOT, Florian;
MARCHAND, Virginie;
HELM, Mark;
MOTORIN, Yuri

Publication type:

Article

Manganese Ions Individually Alter the Reverse Transcription Signature of Modified Ribonucleosides.

Published in:

Genes, 2020, v. 11, n. 8, p. 950, doi. 10.3390/genes11080950

By:

Kristen, Marco;
Plehn, Johanna;
Marchand, Virginie;
Friedland, Kristina;
Motorin, Yuri;
Helm, Mark;
Werner, Stephan

Publication type:

Article

Methods for RNA Modification Mapping Using Deep Sequencing: Established and New Emerging Technologies.

Published in:

Genes, 2019, v. 10, n. 1, p. 35, doi. 10.3390/genes10010035

By:

Motorin, Yuri;
Helm, Mark

Publication type:

Article

Detection and Analysis of RNA Ribose 2′-O-Methylations: Challenges and Solutions.

Published in:

Genes, 2018, v. 9, n. 12, p. 642, doi. 10.3390/genes9120642

By:

Motorin, Yuri;
Marchand, Virginie

Publication type:

Article

TGF-β2 Induces Ribosome Activity, Alters Ribosome Composition and Inhibits IRES-Mediated Translation in Chondrocytes.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 9, p. 5031, doi. 10.3390/ijms25095031

By:

van den Akker, Guus G. H.;
Chabronova, Alzbeta;
Housmans, Bas A. C.;
van der Vloet, Laura;
Surtel, Don A. M.;
Cremers, Andy;
Marchand, Virginie;
Motorin, Yuri;
Caron, Marjolein M. J.;
Peffers, Mandy J.;
Welting, Tim J. M.

Publication type:

Article

Depletion of SNORA33 Abolishes ψ of 28S-U4966 and Affects the Ribosome Translational Apparatus.

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 16, p. 12578, doi. 10.3390/ijms241612578

By:

Chabronova, Alzbeta;
van den Akker, Guus;
Housmans, Bas A. C.;
Caron, Marjolein M. J.;
Cremers, Andy;
Surtel, Don A. M.;
Peffers, Mandy J.;
van Rhijn, Lodewijk W.;
Marchand, Virginie;
Motorin, Yuri;
Welting, Tim J. M.

Publication type:

Article

Mapping the tRNA modification landscape of Bartonella henselae Houston I and Bartonella quintana Toulouse.

Published in:

Frontiers in Microbiology, 2024, p. 01, doi. 10.3389/fmicb.2024.1369018

By:

Quaiyum, Samia;
Jingjing Sun;
Marchand, Virginie;
Guangxin Sun;
Reed, Colbie J.;
Motorin, Yuri;
Dedon, Peter C.;
Minnick, Michael F.;
de Crécy-Lagard, Valérie

Publication type:

Article

Absolute Quantification of Noncoding RNA by Microscale Thermophoresis.

Published in:

Angewandte Chemie International Edition, 2019, v. 58, n. 28, p. 9565, doi. 10.1002/anie.201814377

By:

Jacob, Dominik;
Thüring, Kathrin;
Galliot, Aurellia;
Marchand, Virginie;
Galvanin, Adeline;
Ciftci, Akif;
Scharmann, Karin;
Stock, Michael;
Roignant, Jean‐Yves;
Leidel, Sebastian A.;
Motorin, Yuri;
Schaffrath, Raffael;
Klassen, Roland;
Helm, Mark

Publication type:

Article

AlkAniline‐Seq: Profiling of m7G and m3C RNA Modifications at Single Nucleotide Resolution.

Published in:

Angewandte Chemie International Edition, 2018, v. 57, n. 51, p. 16785, doi. 10.1002/anie.201810946

By:

Marchand, Virginie;
Ayadi, Lilia;
Ernst, Felix G. M.;
Hertler, Jasmin;
Bourguignon‐Igel, Valérie;
Galvanin, Adeline;
Kotter, Annika;
Helm, Mark;
Lafontaine, Denis L. J.;
Motorin, Yuri

Publication type:

Article

Eine DNA‐Polymerase‐Variante erkennt den epigenetischen Marker 5‐Methylcytosin durch erhöhten Fehleinbau.

Published in:

Angewandte Chemie, 2024, v. 136, n. 48, p. 1, doi. 10.1002/ange.202413304

By:

Henkel, Melanie;
Fillbrunn, Alexander;
Marchand, Virginie;
Raghunathan, Govindan;
Berthold, Michael R.;
Motorin, Yuri;
Marx, Andreas

Publication type:

Article

Aminoglycoside tolerance in Vibrio cholerae engages translational reprogramming associated with queuosine tRNA modification.

Published in:

eLife, 2025, p. 1, doi. 10.7554/eLife.96317

By:

Fruchard, Louna;
Babosan, Anamaria;
Carvalho, Andre;
Manon Lang;
Blaise Li;
Duchateau, Magalie;
Gianetto, Quentin Giai;
Matondo, Mariette;
Bonhomme, Frederic;
Hatin, Isabelle;
Arbes, Hugo;
Fabret, Céline;
Corler, Enora;
Sanchez, Guillaume;
Marchand, Virginie;
Motorin, Yuri;
Namy, Olivier;
de Crécy-Lagard, Valérie;
Mazel, Didier;
Baharoglu, Zeynep

Publication type:

Article

Cloning and characterization of the Schizosaccharomyces pombe tRNA:pseudouridine synthase Pus1p.

Published in:

Nucleic Acids Research, 2000, v. 28, n. 23, p. 4604, doi. 10.1093/nar/28.23.4604

By:

Hellmuth, Klaus;
Grosjean, Henri;
Motorin, Yuri;
Deinert, Karina;
Hurt, Ed;
Simos, George

Publication type:

Article

Pyrophosphate mediates the effect of certain tRNA mutations on aminoacylation of yeast tRNAPhe.

Published in:

Nucleic Acids Research, 1999, v. 27, n. 22, p. 4451, doi. 10.1093/nar/27.22.4451

By:

Khvorova, Anastasia;
Motorin, Yuri;
Wolfson, Alexey D.

Publication type:

Article

Transfer RNA modification enzymes from Pyrococcus furiosus: detection of the enzymatic activities in vitro.

Published in:

Nucleic Acids Research, 1999, v. 27, n. 5, p. 1308, doi. 10.1093/nar/27.5.1308

By:

Constantinesco, Florence;
Motorin, Yuri;
Grosjean, Henri

Publication type:

Article

Contribution of protein Gar1 to the RNA-guided and RNA-independent rRNA:Ψ-synthase activities of the archaeal Cbf5 protein.

Published in:

Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-32164-0

By:

Fujikane, Ryosuke;
Behm-Ansmant, Isabelle;
Tillault, Anne-Sophie;
Loegler, Christine;
Igel-Bourguignon, Valérie;
Marguet, Evelyne;
Forterre, Patrick;
Branlant, Christiane;
Motorin, Yuri;
Charpentier, Bruno

Publication type:

Article

Survey and Validation of tRNA Modifications and Their Corresponding Genes in Bacillus subtilis sp Subtilis Strain 168.

Published in:

Biomolecules (2218-273X), 2020, v. 10, n. 7, p. 977, doi. 10.3390/biom10070977

By:

de Crécy-Lagard, Valérie;
Ross, Robert L.;
Jaroch, Marshall;
Marchand, Virginie;
Eisenhart, Christina;
Brégeon, Damien;
Motorin, Yuri;
Limbach, Patrick A.

Publication type:

Article

Next-Generation Sequencing-Based RiboMethSeq Protocol for Analysis of tRNA 2'-O-Methylation.

Published in:

Biomolecules (2218-273X), 2017, v. 7, n. 1, p. 13, doi. 10.3390/biom7010013

By:

Pichot, Florian;
Ayadi, Lilia;
Marchand, Virginie;
Motorin, Yuri;
Thüring, Kathrin;
Helm, Mark;
Freund, Isabel;
Dalpke, Alexander

Publication type:

Article

CoverageAnalyzer (CAn): A Tool for Inspection of Modification Signatures in RNA Sequencing Profiles.

Published in:

Biomolecules (2218-273X), 2016, v. 6, n. 4, p. 42, doi. 10.3390/biom6040042

By:

Hauenschild, Ralf;
Werner, Stephan;
Tserovski, Lyudmil;
Hildebrandt, Andreas;
Motorin, Yuri;
Helm, Mark

Publication type:

Article

Systematic mapping of rRNA 2'-O methylation during frog development and involvement of the methyltransferase Fibrillarin in eye and craniofacial development in Xenopus laevis.

Published in:

PLoS Genetics, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pgen.1010012

By:

Delhermite, Jonathan;
Tafforeau, Lionel;
Sharma, Sunny;
Marchand, Virginie;
Wacheul, Ludivine;
Lattuca, Ruben;
Desiderio, Simon;
Motorin, Yuri;
Bellefroid, Eric;
Lafontaine, Denis L. J.

Publication type:

Article

Innentitelbild: Die stark wachsende chemische Vielfalt der RNA‐Modifikationen enthält eine Thioacetalstruktur (Angew. Chem. 26/2018).

Published in:

2018

By:

Dal Magro, Christina;
Keller, Patrick;
Kotter, Annika;
Werner, Stephan;
Helm, Mark;
Duarte, Victor;
Atta, Mohamed;
Marchand, Virginie;
Ignarski, Michael;
Müller, Roman‐Ulrich;
Freiwald, Anja;
Butter, Falk;
Dieterich, Christoph;
Motorin, Yuri

Publication type:

Cover Art

Die stark wachsende chemische Vielfalt der RNA‐Modifikationen enthält eine Thioacetalstruktur.

Published in:

Angewandte Chemie, 2018, v. 130, n. 26, p. 8019, doi. 10.1002/ange.201713188

By:

Dal Magro, Christina;
Keller, Patrick;
Kotter, Annika;
Werner, Stephan;
Helm, Mark;
Duarte, Victor;
Atta, Mohamed;
Marchand, Virginie;
Ignarski, Michael;
Müller, Roman‐Ulrich;
Freiwald, Anja;
Butter, Falk;
Dieterich, Christoph;
Motorin, Yuri

Publication type:

Article

Entwicklung einer DNA-Polymerase für die direkte m6A-Sequenzierung.

Published in:

Angewandte Chemie, 2018, v. 130, n. 2, p. 424, doi. 10.1002/ange.201710209

By:

Aschenbrenner, Joos;
Werner, Stephan;
Marchand, Virginie;
Adam, Martina;
Motorin, Yuri;
Helm, Mark;
Marx, Andreas

Publication type:

Article

Differential redox sensitivity of tRNA dihydrouridylation.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 21, p. 12784, doi. 10.1093/nar/gkae964

By:

Kilz, Lea-Marie;
Zimmermann, Simone;
Marchand, Virginie;
Bourguignon, Valérie;
Sudol, Claudia;
Brégeon, Damien;
Hamdane, Djemel;
Motorin, Yuri;
Helm, Mark

Publication type:

Article

DORQ-seq: high-throughput quantification of femtomol tRNA pools by combination of cDNA hybridization and Deep sequencing.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 18, p. e89, doi. 10.1093/nar/gkae765

By:

Marco, Kristen;
Marc, Lander;
Lea-Marie, Kilz;
Lukas, Gleue;
Marko, Jörg;
Damien, Bregeon;
Djemel, Hamdane;
Virginie, Marchand;
Yuri, Motorin;
Kristina, Friedland;
Mark, Helm

Publication type:

Article

Functional redundancy in tRNA dihydrouridylation.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 10, p. 5880, doi. 10.1093/nar/gkae325

By:

Sudol, Claudia;
Kilz, Lea-Marie;
Marchand, Virginie;
Thullier, Quentin;
Guérineau, Vincent;
Goyenvalle, Catherine;
Faivre, Bruno;
Toubdji, Sabrine;
Lombard, Murielle;
Jean-Jean, Olivier;
de Crécy-Lagard, Valérie;
Helm, Mark;
Motorin, Yuri;
Brégeon, Damien;
Hamdane, Djemel

Publication type:

Article

Comprehensive map of ribosomal 2′-O-methylation and C/D box snoRNAs in Drosophila melanogaster.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 6, p. 2848, doi. 10.1093/nar/gkae139

By:

Sklias, Athena;
Cruciani, Sonia;
Marchand, Virginie;
Spagnuolo, Mariangela;
Lavergne, Guillaume;
Bourguignon, Valérie;
Brambilla, Alessandro;
Dreos, René;
Marygold, Steven J;
Novoa, Eva Maria;
Motorin, Yuri;
Roignant, Jean-Yves

Publication type:

Article

A dual-purpose polymerase engineered for direct sequencing of pseudouridine and queuosine.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 8, p. 3971, doi. 10.1093/nar/gkad177

By:

Huber, Luisa B;
Kaur, Navpreet;
Henkel, Melanie;
Marchand, Virginie;
Motorin, Yuri;
Ehrenhofer-Murray, Ann E;
Marx, Andreas

Publication type:

Article

Synthesis of point-modified mRNA.

Published in:

Nucleic Acids Research, 2022, v. 50, n. 20, p. e115, doi. 10.1093/nar/gkac719

By:

Hertler, Jasmin;
Slama, Kaouthar;
Schober, Benedikt;
Özrendeci, Zeynep;
Marchand, Virginie;
Motorin, Yuri;
Helm, Mark

Publication type:

Article

Implication of repeat insertion domains in the trans-activity of the long non-coding RNA ANRIL.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 9, p. 4954, doi. 10.1093/nar/gkab245

By:

Alfeghaly, Charbel;
Sanchez, Aymeric;
Rouget, Raphael;
Thuillier, Quentin;
Igel-Bourguignon, Valérie;
Marchand, Virginie;
Branlant, Christiane;
Motorin, Yuri;
Behm-Ansmant, Isabelle;
Maenner, Sylvain

Publication type:

Article