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Proteomic changes induced by longevity-promoting interventions in mice.
- Published in:
- GeroScience, 2024, v. 46, n. 2, p. 1543, doi. 10.1007/s11357-023-00917-z
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- Article
A comprehensive spectral assay library to quantify the Halobacterium salinarum NRC-1 proteome by DIA/SWATH-MS.
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- Scientific Data, 2023, v. 10, n. 1, p. 1, doi. 10.1038/s41597-023-02590-5
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- Article
Integrating Genetics, Transcriptomics, and Proteomics in Lung Tissue to Investigate Chronic Obstructive Pulmonary Disease.
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- American Journal of Respiratory Cell & Molecular Biology, 2023, v. 68, n. 6, p. 651, doi. 10.1165/rcmb.2022-0302OC
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- Article
The PeptideAtlas of a widely cultivated fish Labeo rohita: A resource for the Aquaculture Community.
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- Scientific Data, 2022, v. 9, n. 1, p. 1, doi. 10.1038/s41597-022-01259-9
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- Article
Addendum: Transcriptomics and proteomics reveal two waves of translational repression during the maturation of malaria parasite sporozoites.
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- 2022
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- Correction Notice
Mouse Organ-Specific Proteins and Functions.
- Published in:
- Cells (2073-4409), 2021, v. 10, n. 12, p. 3449, doi. 10.3390/cells10123449
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- Article
Platelet derived growth factor receptor β (PDGFRβ) is a host receptor for the human malaria parasite adhesin TRAP.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-90722-5
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- Article
Non-responder phenotype reveals apparent microbiome-wide antibiotic tolerance in the murine gut.
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- Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-01841-8
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- Article
A redox-active crosslinker reveals an essential and inhibitable oxidative folding network in the endoplasmic reticulum of malaria parasites.
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- PLoS Pathogens, 2021, v. 17, n. 2, p. 1, doi. 10.1371/journal.ppat.1009293
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- Article
A primary human T-cell spectral library to facilitate large scale quantitative T-cell proteomics.
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- Scientific Data, 2020, v. 7, n. 1, p. N.PAG, doi. 10.1038/s41597-020-00744-3
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- Article
A comprehensive spectral assay library to quantify the Escherichia coli proteome by DIA/SWATH-MS.
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- Scientific Data, 2020, v. 7, n. 1, p. N.PAG, doi. 10.1038/s41597-020-00724-7
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- Article
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-19006-2
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- Article
DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-18901-y
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- Article
Lumenal calcification and microvasculopathy in fetuin-A-deficient mice lead to multiple organ morbidity.
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- PLoS ONE, 2020, v. 15, n. 2, p. 1, doi. 10.1371/journal.pone.0228503
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- Article
Absence of full-length dystrophin impairs normal maturation and contraction of cardiomyocytes derived from human-induced pluripotent stem cells.
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- Cardiovascular Research, 2020, v. 116, n. 2, p. 368, doi. 10.1093/cvr/cvz109
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- Article
Transcriptomics and proteomics reveal two waves of translational repression during the maturation of malaria parasite sporozoites.
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- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-12936-6
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- Article
In vivo proteomics identifies the competence regulon and AliB oligopeptide transporter as pathogenic factors in pneumococcal meningitis.
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- PLoS Pathogens, 2019, v. 15, n. 7, p. 1, doi. 10.1371/journal.ppat.1007987
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- Article
The Micronemal Plasmodium Proteins P36 and P52 Act in Concert to Establish the Replication-Permissive Compartment Within Infected Hepatocytes.
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- Frontiers in Cellular & Infection Microbiology, 2018, v. 8, p. N.PAG, doi. 10.3389/fcimb.2018.00413
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- Article
Whole genome sequence and comparative analysis of Borrelia burgdorferi MM1.
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- PLoS ONE, 2018, v. 13, n. 6, p. 1, doi. 10.1371/journal.pone.0198135
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- Article
RAD54 N-terminal domain is a DNA sensor that couples ATP hydrolysis with branch migration of Holliday junctions.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02497-x
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- Article
Multi-laboratory assessment of reproducibility, qualitative and quantitative performance of SWATH-mass spectrometry.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00249-5
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- Article
A wellness study of 108 individuals using personal, dense, dynamic data clouds.
- Published in:
- Nature Biotechnology, 2017, v. 35, n. 8, p. 747, doi. 10.1038/nbt.3870
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- Article
Proteogenomic analysis of the total and surface-exposed proteomes of Plasmodium vivax salivary gland sporozoites.
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- PLoS Neglected Tropical Diseases, 2017, v. 11, n. 7, p. 1, doi. 10.1371/journal.pntd.0005791
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- Article
An integrated transcriptomics-guided genomewide promoter analysis and next-generation proteomics approach to mine factor(s) regulating cellular differentiation.
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- DNA Research, 2017, v. 24, n. 2, p. 143, doi. 10.1093/dnares/dsw057
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- Article
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition.
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- Nucleic Acids Research, 2017, v. 45, n. D1, p. D1100, doi. 10.1093/nar/gkw936
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- Article
Interrogating the Plasmodium Sporozoite Surface: Identification of Surface-Exposed Proteins and Demonstration of Glycosylation on CSP and TRAP by Mass Spectrometry-Based Proteomics.
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- PLoS Pathogens, 2016, v. 12, n. 4, p. 1, doi. 10.1371/journal.ppat.1005606
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- Article
The Pig PeptideAtlas: A resource for systems biology in animal production and biomedicine.
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- Proteomics, 2016, v. 16, n. 4, p. 634, doi. 10.1002/pmic.201500195
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- Article
The molecular architecture of the Dam1 kinetochore complex is defined by cross-linking based structural modelling.
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- Nature Communications, 2015, v. 6, n. 11, p. 8673, doi. 10.1038/ncomms9673
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- Article
A peptide resource for the analysis of Staphylococcus aureus in host-pathogen interaction studies.
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- Proteomics, 2015, v. 15, n. 21, p. 3648, doi. 10.1002/pmic.201500091
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- Article
Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics.
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- Proteomics - Clinical Applications, 2015, v. 9, n. 7/8, p. 745, doi. 10.1002/prca.201400164
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- Article
Kinetochore Biorientation in Saccharomyces cerevisiae Requires a Tightly Folded Conformation of the Ndc80 Complex.
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- Genetics, 2014, v. 198, n. 4, p. 1483, doi. 10.1534/genetics.114.167775
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- Article
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage.
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- Nature Communications, 2014, v. 5, n. 11, p. 5603, doi. 10.1038/ncomms6603
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- Article
Comparative proteome analysis reveals conserved and specific adaptation patterns of Staphylococcus aureus after internalization by different types of human non-professional phagocytic host cells.
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- Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00392
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- Article
The Equine PeptideAtlas: A resource for developing proteomics-based veterinary research.
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- Proteomics, 2014, v. 14, n. 6, p. 763, doi. 10.1002/pmic.201300398
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- Article
Enzymes involved in plastid-targeted phosphatidic acid synthesis are essential for P lasmodium yoelii liver-stage development.
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- Molecular Microbiology, 2014, v. 91, n. 4, p. 679, doi. 10.1111/mmi.12485
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- Article
The Microvesicle Component of HIV-1 Inocula Modulates Dendritic Cell Infection and Maturation and Enhances Adhesion to and Activation of T Lymphocytes.
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- PLoS Pathogens, 2013, v. 9, n. 10, p. 1, doi. 10.1371/journal.ppat.1003700
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- Article
A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis.
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- Nature, 2013, v. 494, n. 7436, p. 266, doi. 10.1038/nature11835
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- Article
New and improved proteomics technologies for understanding complex biological systems: Addressing a grand challenge in the life sciences.
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- Proteomics, 2012, v. 12, n. 18, p. 2773, doi. 10.1002/pmic.201270086
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- Article
A Bovine Peptide Atlas of milk and mammary gland proteomes.
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- Proteomics, 2012, v. 12, n. 18, p. 2895, doi. 10.1002/pmic.201200057
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- Article
Reproducible Quantification of Cancer-Associated Proteins in Body Fluids Using Targeted Proteomics.
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- Science Translational Medicine, 2012, v. 4, n. 142, p. 1, doi. 10.1126/scitranslmed.3003989
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- Article
PASSEL: The Peptide Atlas SRMexperiment library.
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- Proteomics, 2012, v. 12, n. 8, p. 1170, doi. 10.1002/pmic.201100515
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- Publication type:
- Article
An assessment of current bioinformatic solutions for analyzing LC- MS data acquired by selected reaction monitoring technology.
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- Proteomics, 2012, v. 12, n. 8, p. 1176, doi. 10.1002/pmic.201100571
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- Publication type:
- Article
SRM targeted proteomics in search for biomarkers of HCV-induced progression of fibrosis to cirrhosis in HALT- C patients.
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- Proteomics, 2012, v. 12, n. 8, p. 1244, doi. 10.1002/pmic.201100601
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- Article
Hydra: a scalable proteomic search engine which utilizes the Hadoop distributed computing framework.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 324, doi. 10.1186/1471-2105-13-324
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- Article
The ABRF Proteomics Research Group Studies: Educational exercises for qualitative and quantitative proteomic analyses.
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- Proteomics, 2011, v. 11, n. 8, p. 1371, doi. 10.1002/pmic.201000736
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- Article
Tandem application of cationic colloidal silica and Triton X-114 for plasma membrane protein isolation and purification: Towards developing an MDCK protein database.
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- Proteomics, 2011, v. 11, n. 7, p. 1238, doi. 10.1002/pmic.201000591
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- Publication type:
- Article
ATAQS: A computational software tool for high throughput transition optimization and validation for selected reaction monitoring mass spectrometry.
- Published in:
- BMC Bioinformatics, 2011, v. 12, n. 1, p. 78, doi. 10.1186/1471-2105-12-78
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- Article
The Protein Information and Property Explorer 2: Gaggle-like exploration of biological proteomic data within one webpage.
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- Proteomics, 2011, v. 11, n. 1, p. 154, doi. 10.1002/pmic.201000459
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- Publication type:
- Article
Secretome-based proteomics reveals sulindac-modulated proteins released from colon cancer cells.
- Published in:
- Proteomics - Clinical Applications, 2009, v. 3, n. 4, p. 433, doi. 10.1002/prca.200800077
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- Article
PRMT5-mediated methylation of histone H4R3 recruits DNMT3A, coupling histone and DNA methylation in gene silencing.
- Published in:
- Nature Structural & Molecular Biology, 2009, v. 16, n. 3, p. 304, doi. 10.1038/nsmb.1568
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- Article