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Spatial organization of hydrophobic and charged residues affects protein thermal stability and binding affinity.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-16338-5
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- Article
C. elegans-based chemosensation strategy for the early detection of cancer metabolites in urine samples.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-96613-z
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- Article
C. elegans-based chemosensation strategy for the early detection of cancer metabolites in urine samples.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-96613-z
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- Article
Probing TDP-43 condensation using an in silico designed aptamer.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30944-x
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- Article
Lactoferrins in Their Interactions with Molecular Targets: A Structure-Based Overview.
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- Pharmaceuticals (14248247), 2024, v. 17, n. 3, p. 398, doi. 10.3390/ph17030398
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- Article
Lactoferrin Inhibition of the Complex Formation between ACE2 Receptor and SARS CoV-2 Recognition Binding Domain.
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- International Journal of Molecular Sciences, 2022, v. 23, n. 10, p. 5436, doi. 10.3390/ijms23105436
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- Article
Inferring the stabilization effects of SARS-CoV-2 variants on the binding with ACE2 receptor.
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- Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-021-02946-w
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- Article
Thermometer: a webserver to predict protein thermal stability.
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- Bioinformatics, 2022, v. 38, n. 7, p. 2060, doi. 10.1093/bioinformatics/btab868
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- Article
Superposition-free comparison and clustering of antibody binding sites: implications for the prediction of the nature of their antigen.
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- Scientific Reports, 2017, p. 45053, doi. 10.1038/srep45053
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- Article
Evolutionary dynamics of genome size and content during the adaptive radiation of Heliconiini butterflies.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-41412-5
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- Article
A Computational Approach to Investigate TDP-43 RNA-Recognition Motif 2 C-Terminal Fragments Aggregation in Amyotrophic Lateral Sclerosis.
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- Biomolecules (2218-273X), 2021, v. 11, n. 12, p. 1905, doi. 10.3390/biom11121905
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- Article
A Simplified Genomic Profiling Approach Predicts Outcome in Metastatic Colorectal Cancer.
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- Cancers, 2019, v. 11, n. 2, p. 147, doi. 10.3390/cancers11020147
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- Article
Does blood type affect the COVID-19 infection pattern?
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- PLoS ONE, 2021, v. 16, n. 5, p. 1, doi. 10.1371/journal.pone.0251535
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- Article
Synthesis and Characterization of Electrospun Sorbent for the Solid-Phase Extraction of Fluoroquinolones in Human Plasma and Their UHPLC-PDA Determination.
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- Separations (2297-8739), 2023, v. 10, n. 2, p. 104, doi. 10.3390/separations10020104
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- Article
Binding site identification of G protein-coupled receptors through a 3D Zernike polynomials-based method: application to C. elegans olfactory receptors.
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- Journal of Computer-Aided Molecular Design, 2022, v. 36, n. 1, p. 11, doi. 10.1007/s10822-021-00434-1
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- Article
On the activation and deactivation pathways of the Lck kinase domain: a computational study.
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- Journal of Computer-Aided Molecular Design, 2019, v. 33, n. 6, p. 597, doi. 10.1007/s10822-019-00204-0
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- Article
Direct Visualization and Identification of Membrane Voltage‐Gated Sodium Channels from Human iPSC‐Derived Neurons by Multiple Imaging and Light Enhanced Spectroscopy (Small Methods 7/2022).
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- Small Methods, 2022, v. 6, n. 7, p. 1, doi. 10.1002/smtd.202200402
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- Article
Direct Visualization and Identification of Membrane Voltage‐Gated Sodium Channels from Human iPSC‐Derived Neurons by Multiple Imaging and Light Enhanced Spectroscopy.
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- Small Methods, 2022, v. 6, n. 7, p. 1, doi. 10.1002/smtd.202200402
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- Article
Prediction of Time Series Gene Expression and Structural Analysis of Gene Regulatory Networks Using Recurrent Neural Networks.
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- Entropy, 2022, v. 24, n. 2, p. 141, doi. 10.3390/e24020141
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- Article
Insights into the Interaction Mechanism of DTP3 with MKK7 by Using STD-NMR and Computational Approaches.
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- Biomedicines, 2021, v. 9, n. 1, p. 20, doi. 10.3390/biomedicines9010020
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- Article
Molecular Dynamics Simulations Reveal Canonical Conformations in Different pMHC/TCR Interactions.
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- Cells (2073-4409), 2020, v. 9, n. 4, p. 942, doi. 10.3390/cells9040942
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- Article
Structural analysis of SARS-CoV-2 genome and predictions of the human interactome.
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- Nucleic Acids Research, 2020, v. 48, n. 20, p. 11270, doi. 10.1093/nar/gkaa864
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- Article
A novel computational strategy for defining the minimal protein molecular surface representation.
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- PLoS ONE, 2022, v. 17, n. 4, p. 1, doi. 10.1371/journal.pone.0266004
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- Article
A Shearless Microfluidic Device Detects a Role in Mechanosensitivity for AWC<sup>ON</sup> Neuron in Caenorhabditis elegans.
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- Advanced Biology, 2021, v. 5, n. 9, p. 1, doi. 10.1002/adbi.202100927
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Design of protein-binding peptides with controlled binding affinity: the case of SARS-CoV-2 receptor binding domain and angiotensin-converting enzyme 2 derived peptides.
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- Frontiers in Molecular Biosciences, 2024, p. 1, doi. 10.3389/fmolb.2023.1332359
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- Article
Computational evidences of a misfolding event in an aggregation‐prone light chain preceding the formation of the non‐native pathogenic dimer.
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- Proteins, 2024, v. 92, n. 7, p. 797, doi. 10.1002/prot.26672
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- Article
Dynamical changes of SARS‐CoV‐2 spike variants in the highly immunogenic regions impact the viral antibodies escaping.
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- Proteins, 2023, v. 91, n. 8, p. 1116, doi. 10.1002/prot.26497
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Assessing the accuracy of contact and distance predictions in CASP14.
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- Proteins, 2021, v. 89, n. 12, p. 1888, doi. 10.1002/prot.26248
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- Article
proABC-2: PRediction of AntiBody contacts v2 and its application to information-driven docking.
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- Bioinformatics, 2020, v. 36, n. 20, p. 5107, doi. 10.1093/bioinformatics/btaa644
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- Article
Insights on protein thermal stability: a graph representation of molecular interactions.
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- Bioinformatics, 2019, v. 35, n. 15, p. 2569, doi. 10.1093/bioinformatics/bty1011
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- Article
Prediction of the permeability of neutral drugs inferred from their solvation properties.
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- Bioinformatics, 2016, v. 32, n. 8, p. 1163, doi. 10.1093/bioinformatics/btv725
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- Article
Clinical Multigene Panel Sequencing Identifies Distinct Mutational Association Patterns in Metastatic Colorectal Cancer.
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- Frontiers in Oncology, 2020, v. 10, p. 1, doi. 10.3389/fonc.2020.00560
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- Article