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The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children.
Published in:
Microbiome, 2015, v. 3, n. 1, p. 1, doi. 10.1186/s40168-015-0102-9
By:
- Ordiz, M. Isabel;
- May, Thaddaeus D.;
- Mihindukulasuriya, Kathie;
- Martin, John;
- Crowley, Jan;
- Tarr, Phillip I.;
- Ryan, Kelsey;
- Mortimer, Elissa;
- Gopalsamy, Geetha;
- Maleta, Ken;
- Mitreva, Makedonka;
- Young, Graeme;
- Manary, Mark J.
Publication type:
Article
Multi‐omics approaches reveal a link between the MS4A gene loci, TREM2, and microglia function.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2021, v. 17, n. 3, p. 1, doi. 10.1002/alz.054553
By:
- You, Shih‐Feng;
- Brase, Logan;
- Filipello, Fabia;
- Del‐Aguila, Jorge L.;
- Mihindukulasuriya, Kathie A.;
- Benitez, Bruno A.;
- Cruchaga, Carlos;
- Harari, Oscar;
- Karch, Celeste M.
Publication type:
Article
Alzheimer's disease alters oligodendrocytic glycolytic and ketolytic gene expression.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2021, v. 17, n. 9, p. 1474, doi. 10.1002/alz.12310
By:
- Saito, Erin R.;
- Miller, Justin B.;
- Harari, Oscar;
- Cruchaga, Carlos;
- Mihindukulasuriya, Kathie A.;
- Kauwe, John S. K.;
- Bikman, Benjamin T.
Publication type:
Article
A Mendelian randomization approach to characterize overlap in the pathophysiology of neurological disorders: Genetics/omics and systems biology.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2020, v. 16, n. 11, p. 1, doi. 10.1002/alz.044238
By:
- Bahena, Jorge Alberto;
- Eiffert, Brett;
- Farias, Fabiana H.G.;
- Ibanez, Laura;
- Mihindukulasuriya, Kathie A.;
- Budde, John P.;
- Cruchaga, Carlos;
- Harari, Oscar
Publication type:
Article
Multiomics approaches reveal a link between the MS4A gene loci, TREM2, and microglia function: Genetics/omics and systems biology.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2020, v. 16, n. 11, p. 1, doi. 10.1002/alz.043592
By:
- You, Shih‐Feng;
- He, June;
- Filipello, Fabia;
- Brase, Logan;
- Del‐Aguila, Jorge L.;
- Mihindukulasuriya, Kathie A.;
- Benitez, Bruno A.;
- Cruchaga, Carlos;
- Harari, Oscar;
- Karch, Celeste M.
Publication type:
Article
Identification of multi‐issue protein quantitative trait loci (pQTLs) for Alzheimer disease: Genetics/omics and systems biology.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2020, v. 16, n. 11, p. 1, doi. 10.1002/alz.040496
By:
- Yang, Chengran;
- Farias, Fabiana H.G.;
- Mihindukulasuriya, Kathie A.;
- Davenport, Richard;
- Wang, Fengxian;
- Budde, John P.;
- Rhinn, Herve;
- Cruchaga, Carlos;
- Harari, Oscar
Publication type:
Article
P4‐106: INTEGRATIVE ANALYSIS POINTS TO AGFG2 AS A NOVEL PLAYER IN THE PATHOLOGY OF ALZHEIMER DISEASE.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2019, v. 15, p. P1315, doi. 10.1016/j.jalz.2019.06.3767
By:
- Fernandez, Victoria;
- Del-Aguila, Jorge L.;
- Li, Zeran;
- Dube, Umber;
- Davenport, Richard;
- Bradley, Joseph;
- Mihindukulasuriya, Kathie A.;
- Farias, Fabiana H.G.;
- Budde, John P.;
- Norton, Joanne;
- Gentsch, Jen;
- Morris, John C.;
- Harari, Oscar;
- Cruchaga, Carlos
Publication type:
Article
P3‐116: TMEM106B PROTECTIVE VARIANT ASSOCIATED WITH INCREASED NEURONAL PROPORTION.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2019, v. 15, p. P974, doi. 10.1016/j.jalz.2019.06.3144
By:
- Li, Zeran;
- Farias, Fabiana H.G.;
- Dube, Umber;
- Del-Aguila, Jorge L.;
- Fernandez, Victoria;
- Ibanez, Laura;
- Budde, John P.;
- Wang, Fengxian;
- Lake, Allison M.;
- Robles, Yuetiva;
- Perez, James;
- Yang, Chengran;
- Mihindukulasuriya, Kathie A.;
- Bradley, Joseph;
- Davenport, Richard;
- Bergmann, Kristy;
- Dougherty, Joseph D.;
- Harari, Oscar;
- Cruchaga, Carlos
Publication type:
Article
P2‐137: AN E‐QTL META‐ANALYSIS OF BRAIN CORTICAL TISSUE ACROSS FIVE CONSORTIUM‐BASED STUDIES.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2019, v. 15, p. P625, doi. 10.1016/j.jalz.2019.06.2544
By:
- Perez, James A.;
- Mihindukulasuriya, Kathie A.;
- Farias, Fabiana H.G.;
- Li, Zeran;
- Dube, Umber;
- Budde, John P.;
- Cruchaga, Carlos;
- Harari, Oscar
Publication type:
Article
P1‐130: HIGH‐THROUGHPUT OMICS EXPLORER FOR ALZHEIMER'S DISEASE AND COMPLEX TRAITS GENETIC ANALYSIS.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2019, v. 15, p. P285, doi. 10.1016/j.jalz.2019.06.685
By:
- Bahena, Jorge Alberto;
- Farias, Fabiana H.G.;
- Mihindukulasuriya, Kathie A.;
- Budde, John P.;
- Cruchaga, Carlos;
- Harari, Oscar
Publication type:
Article
A single-nuclei RNA sequencing study of Mendelian and sporadic AD in the human brain.
Published in:
Alzheimer's Research & Therapy, 2019, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13195-019-0524-x
By:
- Del-Aguila, Jorge L.;
- Li, Zeran;
- Dube, Umber;
- Mihindukulasuriya, Kathie A.;
- Budde, John P.;
- Fernandez, Maria Victoria;
- Ibanez, Laura;
- Bradley, Joseph;
- Wang, Fengxian;
- Bergmann, Kristy;
- Davenport, Richard;
- Morris, John C.;
- Holtzman, David M.;
- Perrin, Richard J.;
- Benitez, Bruno A.;
- Dougherty, Joseph;
- Cruchaga, Carlos;
- Harari, Oscar
Publication type:
Article
Sequence Analysis of the Human Virome in Febrile and Afebrile Children.
Published in:
PLoS ONE, 2012, v. 7, n. 6, p. e27735, doi. 10.1371/journal.pone.0027735
By:
- Wylie, Kristine M.;
- Mihindukulasuriya, Kathie A.;
- Sodergren, Erica;
- Weinstock, George M.;
- Storch, Gregory A.
Publication type:
Article
Dengue virus surveillance in Nepal yields the first on-site whole genome sequences of isolates from the 2022 outbreak.
Published in:
BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10879-x
By:
- Napit, Rajindra;
- Elong Ngono, Annie;
- Mihindukulasuriya, Kathie A.;
- Pradhan, Aunji;
- Khadka, Binod;
- Shrestha, Smita;
- Droit, Lindsay;
- Paredes, Anne;
- Karki, Lata;
- Khatiwada, Rabindra;
- Tamang, Mamata;
- Chalise, Bimal Sharma;
- Rawal, Manisha;
- Jha, Bimalesh Kumar;
- Wang, David;
- Handley, Scott A.;
- Shresta, Sujan;
- Manandhar, Krishna Das
Publication type:
Article
Alzheimer's Disease Alters Oligodendrocytic Glycolytic and Ketolytic Gene Expression.
Published in:
FASEB Journal, 2021, v. 35, p. N.PAG, doi. 10.1096/fasebj.2021.35.S1.02461
By:
- Saito, Erin;
- Miller, Justin;
- Harari, Oscar;
- Cruchaga, Carlos;
- Mihindukulasuriya, Kathie;
- Kauwe, John;
- Bikman, Benjamin
Publication type:
Article
Human enteric viruses autonomously shape inflammatory bowel disease phenotype through divergent innate immunomodulation.
Published in:
Science Immunology, 2022, v. 7, n. 70, p. 1, doi. 10.1126/sciimmunol.abn6660
By:
- Adiliaghdam, Fatemeh;
- Amatullah, Hajera;
- Digumarthi, Sreehaas;
- Saunders, Tahnee L.;
- Rahman, Raza-Ur;
- Wong, Lai Ping;
- Sadreyev, Ruslan;
- Droit, Lindsay;
- Paquette, Jean;
- Goyette, Philippe;
- Rioux, John D.;
- Hodin, Richard;
- Mihindukulasuriya, Kathie A.;
- Handley, Scott A.;
- Jeffrey, Kate L.
Publication type:
Article
Exploration of bacterial community classes in major human habitats.
Published in:
Genome Biology, 2014, v. 15, n. 5, p. 1, doi. 10.1186/gb-2014-15-5-r66
By:
- Yanjiao Zhou;
- Mihindukulasuriya, Kathie A.;
- Hongyu Gao;
- La Rosa, Patricio S.;
- Wylie, Kristine M.;
- Martin, John C.;
- Kota, Karthik;
- Shannon, William D.;
- Mitreva, Makedonka;
- Sodergren, Erica;
- Weinstock, George M.
Publication type:
Article
Biogeography of the ecosystems of the healthy human body.
Published in:
Genome Biology, 2013, v. 14, n. 1, p. 1, doi. 10.1186/gb-2013-14-1-r1
By:
- Yanjiao Zhou;
- Hongyu Gao;
- Mihindukulasuriya, Kathie A.;
- La Rosa, Patricio S.;
- Wylie, Kristine M.;
- Vishnivetskaya, Tatiana;
- Podar, Mircea;
- Warner, Barb;
- Tarr, Phillip I.;
- Nelson, David E.;
- Fortenberry, J. Dennis;
- Holland, Martin J.;
- Burr, Sarah E.;
- Shannon, William D.;
- Sodergren, Erica;
- Weinstock, George M.
Publication type:
Article
Metagenomic analysis of double-stranded DNA viruses in healthy adults.
Published in:
BMC Biology, 2014, v. 12, n. 1, p. 1, doi. 10.1186/s12915-014-0071-7
By:
- Wylie, Kristine M.;
- Mihindukulasuriya, Kathie A.;
- Yanjiao Zhou;
- Sodergren, Erica;
- Storch, Gregory A.;
- Weinstock, George M.
Publication type:
Article
TREM2 activation on microglia promotes myelin debris clearance and remyelination in a model of multiple sclerosis.
Published in:
Acta Neuropathologica, 2020, v. 140, n. 4, p. 513, doi. 10.1007/s00401-020-02193-z
By:
- Cignarella, Francesca;
- Filipello, Fabia;
- Bollman, Bryan;
- Cantoni, Claudia;
- Locca, Alberto;
- Mikesell, Robert;
- Manis, Melissa;
- Ibrahim, Adiljan;
- Deng, Li;
- Benitez, Bruno A.;
- Cruchaga, Carlos;
- Licastro, Danilo;
- Mihindukulasuriya, Kathie;
- Harari, Oscar;
- Buckland, Michael;
- Holtzman, David M.;
- Rosenthal, Arnon;
- Schwabe, Tina;
- Tassi, Ilaria;
- Piccio, Laura
Publication type:
Article
The TMEM106B FTLD-protective variant, rs1990621, is also associated with increased neuronal proportion.
Published in:
Acta Neuropathologica, 2020, v. 139, n. 1, p. 45, doi. 10.1007/s00401-019-02066-0
By:
- Li, Zeran;
- Farias, Fabiana H. G.;
- Dube, Umber;
- Del-Aguila, Jorge L.;
- Mihindukulasuriya, Kathie A.;
- Fernandez, Maria Victoria;
- Ibanez, Laura;
- Budde, John P.;
- Wang, Fengxian;
- Lake, Allison M.;
- Deming, Yuetiva;
- Perez, James;
- Yang, Chengran;
- Bahena, Jorge A.;
- Qin, Wei;
- Bradley, Joseph L.;
- Davenport, Richard;
- Bergmann, Kristy;
- Morris, John C.;
- Perrin, Richard J.
Publication type:
Article
Nyamiviridae: Proposal for a new family in the order Mononegavirales.
Published in:
Archives of Virology, 2013, v. 158, n. 10, p. 2209, doi. 10.1007/s00705-013-1674-y
By:
- Kuhn, Jens;
- Bekal, Sadia;
- Caì, Yíngyún;
- Clawson, Anna;
- Domier, Leslie;
- Herrel, Marieke;
- Jahrling, Peter;
- Kondo, Hideki;
- Lambert, Kris;
- Mihindukulasuriya, Kathie;
- Nowotny, Norbert;
- Radoshitzky, Sheli;
- Schneider, Urs;
- Staeheli, Peter;
- Suzuki, Nobuhiro;
- Tesh, Robert;
- Wang, David;
- Wang, Lin-Fa;
- Dietzgen, Ralf
Publication type:
Article
TREM2 brain transcript-specific studies in AD and TREM2 mutation carriers.
Published in:
Molecular Neurodegeneration, 2019, v. 14, n. 1, p. N.PAG, doi. 10.1186/s13024-019-0319-3
By:
- Del-Aguila, Jorge L.;
- Benitez, Bruno A.;
- Li, Zeran;
- Dube, Umber;
- Mihindukulasuriya, Kathie A.;
- Budde, John P.;
- Farias, Fabiana H. G.;
- Fernández, Maria Victoria;
- Ibanez, Laura;
- Jiang, Shan;
- Perrin, Richard J.;
- Cairns, Nigel J.;
- Morris, John C.;
- Harari, Oscar;
- Cruchaga, Carlos
Publication type:
Article
Drosophila TDP-43 RNA-Binding Protein Facilitates Association of Sister Chromatid Cohesion Proteins with Genes, Enhancers and Polycomb Response Elements.
Published in:
PLoS Genetics, 2016, v. 12, n. 9, p. 1, doi. 10.1371/journal.pgen.1006331
By:
- Swain, Amanda;
- Misulovin, Ziva;
- Pherson, Michelle;
- Gause, Maria;
- Mihindukulasuriya, Kathie;
- Rickels, Ryan A;
- Shilatifard, Ali;
- Dorsett, Dale
Publication type:
Article

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