Works matching AU Mieczkowski, Piotr A

Results: 78

Genome-wide maps of UV damage repair and mutation suppression by CPD photolyase Open Access.

Published in:

Nucleic Acids Research, 2025, v. 53, n. 11, p. 1, doi. 10.1093/nar/gkaf495

By:

Bohm, Kaitlynne A;
Laughery, Marian F;
Mieczkowski, Piotr A;
Roberts, Steven A;
Wyrick, John J

Publication type:

Article

Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 3, p. 185, doi. 10.1038/nsmb.2957

By:

Clausen, Anders R;
Lujan, Scott A;
Burkholder, Adam B;
Orebaugh, Clinton D;
Williams, Jessica S;
Clausen, Maryam F;
Malc, Ewa P;
Mieczkowski, Piotr A;
Fargo, David C;
Smith, Duncan J;
Kunkel, Thomas A

Publication type:

Article

Noninvasive prenatal exome sequencing diagnostic utility limited by sequencing depth and fetal fraction.

Published in:

Prenatal Diagnosis, 2022, v. 42, n. 5, p. 567, doi. 10.1002/pd.6009

By:

Filer, Dayne L.;
Mieczkowski, Piotr A.;
Brandt, Alicia;
Gilmore, Kelly L.;
Powell, Bradford C.;
Berg, Jonathan S.;
Wilhelmsen, Kirk C.;
Vora, Neeta L.

Publication type:

Article

High-Resolution Transcript Profiling of the Atypical Biotrophic Interaction between Theobroma cacao and the Fungal Pathogen Moniliophthora perniciosa.

Published in:

Plant Cell, 2014, v. 26, n. 11, p. 4245, doi. 10.1105/tpc.114.130807

By:

Teixeira, Paulo José Pereira Lima;
Thomazella, Daniela Paula de Toledo;
Reis, Osvaldo;
Prado, Paula Favoretti Vital do;
Rio, Maria Carolina Scatolin do;
Fiorin, Gabriel Lorencini;
José, Juliana;
Costa, Gustavo Gilson Lacerda;
Negri, Victor Augusti;
Mondego, Jorge Maurício Costa;
Mieczkowski, Piotr;
Pereira, Gonçalo Amarante Guimarães

Publication type:

Article

Specific Bacterial Taxa and Their Metabolite, DHPS, May Be Linked to Gut Dyshomeostasis in Patients with Alzheimer's Disease, Parkinson's Disease, and Amyotrophic Lateral Sclerosis.

Published in:

Nutrients, 2025, v. 17, n. 9, p. 1597, doi. 10.3390/nu17091597

By:

Christopher, Courtney Jayde;
Morgan, Katherine Hope;
Tolleson, Christopher Mahone;
Trudell, Randall;
Fernandez-Romero, Roberto;
Rice, Lexis;
Abiodun, Blessing A.;
Vickery, Zane;
Jones, Katarina A.;
Woodall, Brittni Morgan;
Nagy, Christopher;
Mieczkowski, Piotr Andrzej;
Bowen, Gregory;
Campagna, Shawn R.;
Ellis, Joseph Christopher

Publication type:

Article

An APOBEC3A hypermutation signature is distinguishable from the signature of background mutagenesis by APOBEC3B in human cancers.

Published in:

Nature Genetics, 2015, v. 47, n. 9, p. 1067, doi. 10.1038/ng.3378

By:

Sterling, Joan F;
Malc, Ewa P;
Fargo, David C;
Mieczkowski, Piotr A;
Kwiatkowski, David J;
Saini, Natalie;
Kim, Jaegil;
Roberts, Steven A;
Getz, Gad;
Chan, Kin;
Gordenin, Dmitry A;
Klimczak, Leszek J

Publication type:

Article

Nucleosome dynamics define transcriptional enhancers.

Published in:

Nature Genetics, 2010, v. 42, n. 4, p. 343, doi. 10.1038/ng.545

By:

Housheng Hansen He;
Meyer, Clifford A.;
Hyunjin Shin;
Bailey, Shannon T.;
Gang Wei;
Qianben Wang;
Yong Zhang;
Kexin Xu;
Min Ni;
Lupien, Mathieu;
Mieczkowski, Piotr;
Lieb, Jason D.;
Zhao, Keji;
Brown, Myles;
X. Shirley Liu

Publication type:

Article

A map of open chromatin in human pancreatic islets.

Published in:

Nature Genetics, 2010, v. 42, n. 3, p. 255, doi. 10.1038/ng.530

By:

Gaulton, Kyle J.;
Nammo, Takao;
Pasquali, Lorenzo;
Simon, Jeremy M.;
Giresi, Paul G.;
Fogarty, Marie P.;
Panhuis, Tami M.;
Mieczkowski, Piotr;
Secchi, Antonio;
Bosco, Domenico;
Berney, Thierry;
Montanya, Eduard;
Mohlke, Karen L.;
Lieb, Jason D.;
Ferrer, Jorge

Publication type:

Article

Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization.

Published in:

Nature Genetics, 2009, v. 41, n. 4, p. 438, doi. 10.1038/ng.324

By:

Field, Yair;
Fondufe-Mittendorf, Yvonne;
Moore, Irene K.;
Mieczkowski, Piotr;
Kaplan, Noam;
Lubling, Yaniv;
Lieb, Jason D;
Widom, Jonathan;
Segal, Eran

Publication type:

Article

Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production.

Published in:

Microbial Cell Factories, 2015, v. 14, n. 1, p. 1, doi. 10.1186/s12934-015-0196-6

By:

Carvalho-Netto, Osmar V.;
Carazzolle, Marcelo F.;
Mofatto, Luciana S.;
Teixeira, Paulo J. P. L.;
Noronha, Melline F.;
Calderón, Luige A. L.;
Mieczkowski, Piotr A.;
Argueso, Juan Lucas;
Pereira, Gonçalo A. G.

Publication type:

Article

Saccharomyces cerevisiae transcriptional reprograming due to bacterial contamination during industrial scale bioethanol production.

Published in:

Microbial Cell Factories, 2015, v. 14, n. 1, p. 281, doi. 10.1186/s12934-015-0196-6

By:

Carvalho-Netto, Osmar V.;
Carazzolle, Marcelo F.;
Mofatto, Luciana S.;
Teixeira, Paulo J. P. L.;
Noronha, Melline F.;
Calderón, Luige A. L.;
Mieczkowski, Piotr A.;
Argueso, Juan Lucas;
Pereira, Gonçalo A. G.

Publication type:

Article

Xylem transcription profiles indicate potential metabolic responses for economically relevant characteristics of Eucalyptus species.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-201

By:

Salazar, Marcela Mendes;
Nascimento, Leandro Costa;
Oliveira Camargo, Eduardo Leal;
Gonçalves, Danieli Cristina;
Neto, Jorge Lepikson;
Marques, Wesley Leoricy;
Lima Teixeira, Paulo José Pereira;
Mieczkowski, Piotr;
Costa Mondego, Jorge Maurício;
Carazzolle, Marcelo Falsarella;
Deckmann, Ana Carolina;
Guimarães Pereira, Gonçalo Amarante

Publication type:

Article

Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome.

Published in:

BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-91

By:

Ambrosio, Alinne Batista;
do Nascimento, Leandro Costa;
Oliveira, Bruno V.;
Teixeira, Paulo José P. L.;
Tiburcio, Ricardo A.;
Thomazella, Daniela P. Toledo;
Leme, Adriana F. P.;
Carazzolle, Marcelo F.;
Vidal, Ramon O.;
Mieczkowski, Piotr;
Meinhardt, Lyndel W.;
Pereira, Gonçalo A. G.;
Cabrera, Odalys G.

Publication type:

Article

The genome sequence of Propionibacterium acidipropionici provides insights into its biotechnological and industrial potential.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 562, doi. 10.1186/1471-2164-13-562

By:

Parizzi, Lucas P.;
Grassi, Maria Carolina B.;
Llerena, Luige A.;
Carazzolle, Marcelo F.;
Queiroz, Ver�nica L.;
Lunardi, In�s;
Zeidler, Ane F.;
Teixeira, Paulo J. P. L.;
Mieczkowski, Piotr;
Rincones, Johana;
Pereira, Gon�alo A. G.

Publication type:

Article

Cryptococcus gattii VGIII Isolates Causing Infections in HIV/AIDS Patients in Southern California: Identification of the Local Environmental Source as Arboreal.

Published in:

PLoS Pathogens, 2014, v. 10, n. 8, p. 1, doi. 10.1371/journal.ppat.1004285

By:

Springer, Deborah J.;
Billmyre, R. Blake;
Filler, Elan E.;
Voelz, Kerstin;
Pursall, Rhiannon;
Mieczkowski, Piotr A.;
Larsen, Robert A.;
Dietrich, Fred S.;
May, Robin C.;
Filler, Scott G.;
Heitman, Joseph

Publication type:

Article

Correction: Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation.

Published in:

2020

By:

Sakofsky, Cynthia J.;
Saini, Natalie;
Klimczak, Leszek J.;
Chan, Kin;
Malc, Ewa P.;
Mieczkowski, Piotr A.;
Burkholder, Adam B.;
Fargo, David;
Gordenin, Dmitry A.

Publication type:

Correction Notice

Repair of multiple simultaneous double-strand breaks causes bursts of genome-wide clustered hypermutation.

Published in:

PLoS Biology, 2019, v. 17, n. 9, p. 1, doi. 10.1371/journal.pbio.3000464

By:

Sakofsky, Cynthia J.;
Saini, Natalie;
Klimczak, Leszek J.;
Chan, Kin;
Malc, Ewa P.;
Mieczkowski, Piotr A.;
Burkholder, Adam B.;
Fargo, David;
Gordenin, Dmitry A.

Publication type:

Article

The Shu complex prevents mutagenesis and cytotoxicity of single-strand specific alkylation lesions.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.68080

By:

Bonilla, Braulio;
Brown, Alexander J.;
Hengel, Sarah R.;
Rapchak, Kyle S.;
Mitchell, Debra;
Pressimone, Catherine A.;
Fagunloye, Adeola A.;
Luong, Thong T.;
Russell, Reagan A.;
Vyas, Rudri K.;
Mertz, Tony M.;
Zaher, Hani S.;
Mosammaparast, Nima;
Malc, Ewa P.;
Mieczkowski, Piotr A.;
Roberts, Steven A.;
Bernstein, Kara A.

Publication type:

Article

Cavitation Enhancing Nanodroplets Mediate Efficient DNA Fragmentation in a Bench Top Ultrasonic Water Bath.

Published in:

PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0133014

By:

Kasoji, Sandeep K.;
Pattenden, Samantha G.;
Malc, Ewa P.;
Jayakody, Chatura N.;
Tsuruta, James K.;
Mieczkowski, Piotr A.;
Janzen, William P.;
Dayton, Paul A.

Publication type:

Article

The Fungal Pathogen Moniliophthora perniciosa Has Genes Similar to Plant PR-1 That Are Highly Expressed during Its Interaction with Cacao.

Published in:

PLoS ONE, 2012, v. 7, n. 9, p. 1, doi. 10.1371/journal.pone.0045929

By:

Teixeira, Paulo J. P. L.;
Thomazella, Daniela P. T.;
Vidal, Ramon O.;
Do Prado, Paula F. V.;
Reis, Osvaldo;
Baroni, Renata M.;
Franco, Sulamita F.;
Mieczkowski, Piotr;
Pereira, Gonçalo A. G.;
Mondego, Jorge M. C.;
Carter, Dee A.

Publication type:

Article

Quantitative Analysis of Focused A-To-I RNA Editing Sites by Ultra-High- Throughput Sequencing in Psychiatric Disorders.

Published in:

PLoS ONE, 2012, v. 7, n. 8, p. 1, doi. 10.1371/journal.pone.0043227

By:

Hu Zhu;
Urban, Daniel J.;
Blashka, Jared;
McPheeters, Matthew T.;
Kroeze, Wesley K.;
Mieczkowski, Piotr;
Overholser, James C.;
Jurjus, George J.;
Dieter, Lesa;
Mahajan, Gouri J.;
Rajkowska, Grazyna;
Zefeng Wang;
Sullivan, Patrick F.;
Stockmeier, Craig A.;
Roth, Bryan L.;
Lewin, Alfred

Publication type:

Article

Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages.

Published in:

PLoS Genetics, 2020, v. 16, n. 3, p. 1, doi. 10.1371/journal.pgen.1008646

By:

Fang, Yufeng;
Coelho, Marco A.;
Shu, Haidong;
Schotanus, Klaas;
Thimmappa, Bhagya C.;
Yadav, Vikas;
Chen, Han;
Malc, Ewa P.;
Wang, Jeremy;
Mieczkowski, Piotr A.;
Kronmiller, Brent;
Tyler, Brett M.;
Sanyal, Kaustuv;
Dong, Suomeng;
Nowrousian, Minou;
Heitman, Joseph

Publication type:

Article

Metabolic Potential, Ecology and Presence of Associated Bacteria Is Reflected in Genomic Diversity of Mucoromycotina.

Published in:

Frontiers in Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fmicb.2021.636986

By:

Muszewska, Anna;
Okrasińska, Alicja;
Steczkiewicz, Kamil;
Drgas, Olga;
Orłowska, Małgorzata;
Perlińska-Lenart, Urszula;
Aleksandrzak-Piekarczyk, Tamara;
Szatraj, Katarzyna;
Zielenkiewicz, Urszula;
Piłsyk, Sebastian;
Malc, Ewa;
Mieczkowski, Piotr;
Kruszewska, Joanna S.;
Bernat, Przemysław;
Pawłowska, Julia

Publication type:

Article

Contributions of replicative and translesion DNA polymerases to mutagenic bypass of canonical and atypical UV photoproducts.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38255-5

By:

Vandenberg, Brittany N.;
Laughery, Marian F.;
Cordero, Cameron;
Plummer, Dalton;
Mitchell, Debra;
Kreyenhagen, Jordan;
Albaqshi, Fatimah;
Brown, Alexander J.;
Mieczkowski, Piotr A.;
Wyrick, John J.;
Roberts, Steven A.

Publication type:

Article

The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts.

Published in:

PLoS Genetics, 2016, v. 12, n. 10, p. 1, doi. 10.1371/journal.pgen.1006385

By:

Saini, Natalie;
Roberts, Steven A.;
Klimczak, Leszek J.;
Chan, Kin;
Grimm, Sara A.;
Dai, Shuangshuang;
Fargo, David C.;
Boyer, Jayne C.;
Kaufmann, William K.;
Taylor, Jack A.;
Lee, Eunjung;
Cortes-Ciriano, Isidro;
Park, Peter J.;
Schurman, Shepherd H.;
Malc, Ewa P.;
Mieczkowski, Piotr A.;
Gordenin, Dmitry A.

Publication type:

Article

Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin.

Published in:

PLoS Genetics, 2015, v. 11, n. 10, p. 1, doi. 10.1371/journal.pgen.1005614

By:

Wu, Guangxi;
Zhao, He;
Li, Chenhao;
Rajapakse, Menaka Priyadarsani;
Wong, Wing Cheong;
Xu, Jun;
Saunders, Charles W.;
Reeder, Nancy L.;
Reilman, Raymond A.;
Scheynius, Annika;
Sun, Sheng;
Billmyre, Blake Robert;
Li, Wenjun;
Averette, Anna Floyd;
Mieczkowski, Piotr;
Heitman, Joseph;
Theelen, Bart;
Schröder, Markus S.;
De Sessions, Paola Florez;
Butler, Geraldine

Publication type:

Article

Multiple DNA repair pathways prevent acetaldehyde-induced mutagenesis in yeast.

Published in:

Genetics, 2025, v. 229, n. 4, p. 1, doi. 10.1093/genetics/iyae213

By:

Porcher, Latarsha;
Vijayraghavan, Sriram;
Patel, Yashvi;
Becker, Samuel;
Blouin, Thomas;
McCollum, James;
Mieczkowski, Piotr A;
Saini, Natalie

Publication type:

Article

Genome-wide maps of UVA and UVB mutagenesis in yeast reveal distinct causative lesions and mutational strand asymmetries.

Published in:

Genetics, 2023, v. 224, n. 3, p. 1, doi. 10.1093/genetics/iyad086

By:

Laughery, Marian F.;
Plummer, Dalton A.;
Wilson, Hannah E.;
Vandenberg, Brittany N.;
Mitchell, Debra;
Mieczkowski, Piotr A.;
Roberts, Steven A.;
Wyrick, John J.

Publication type:

Article

Evidence for Local Regulatory Control of Escape from Imprinted X Chromosome Inactivation.

Published in:

Genetics, 2014, v. 197, n. 2, p. 715, doi. 10.1534/genetics.114.162800

By:

Mugford, Joshua W.;
Starmer, Joshua;
Williams Jr., Rex L.;
Mauro Calabrese, J.;
Mieczkowski, Piotr;
Yee, Della;
Magnuson, Terry

Publication type:

Article

Gene Copy-Number Variation in Haploid and Diploid Strains of the Yeast Saccharomyces cerevisiae.

Published in:

Genetics, 2013, v. 193, n. 3, p. 785, doi. 10.1534/genetics.112.146522

By:

Hengshan Zhang;
Zeidler, Ane F. B.;
Wei Song;
Puccia, Christopher M.;
Malc, Ewa;
Greenwell, Patricia W.;
Mieczkowski, Piotr A.;
Petes, Thomas D.;
Argueso, Juan Lucas

Publication type:

Article

High-Resolution Genome-Wide Analysis of Irradiated (UV and γ-Rays) Diploid Yeast Cells Reveals a High Frequency of Genomic Loss of Heterozygosity (LOH) Events.

Published in:

Genetics, 2012, v. 190, n. 4, p. 1267, doi. 10.1534/genetics.111.137927

By:

St. Charles, Jordan;
Hazkani-Covo, Einat;
Yi Yin;
Andersen, Sabrina L.;
Dietrich, Fred S.;
Greenwell, Patricia W.;
Malc, Ewa;
Mieczkowski, Piotr;
Petes, Thomas D.

Publication type:

Article

Multiplex amplicon sequencing for microbe identification in community-based culture collections.

Published in:

Scientific Reports, 2016, p. 29543, doi. 10.1038/srep29543

By:

Armanhi, Jaderson Silveira Leite;
de Souza, Rafael Soares Correa;
de Araújo, Laura Migliorini;
Okura, Vagner Katsumi;
Mieczkowski, Piotr;
Imperial, Juan;
Arruda, Paulo

Publication type:

Article

Root Development of Tomato Plants Infected by the Cacao Pathogen Moniliophthora perniciosa Is Affected by Limited Sugar Availability.

Published in:

Plant, Cell & Environment, 2025, v. 48, n. 5, p. 3603, doi. 10.1111/pce.15385

By:

Paschoal, Daniele;
Cazetta, Laura;
Mendes, João V. O.;
Dias, Nathália C. F.;
Ometto, Vitor;
Carrera, Esther;
Rossi, Mônica L.;
Aricetti, Juliana A.;
Mieczkowski, Piotr;
Carvalho, Gabriel G.;
Cesarino, Igor;
da Silva, Simone F.;
Ribeiro, Rafael V.;
Teixeira, Paulo J. P. L.;
da Silva, Eder M.;
Figueira, Antonio

Publication type:

Article

Congenital Midline Cervical Cleft: First Report and Genetic Analysis of Two Related Patients.

Published in:

Annals of Otology, Rhinology & Laryngology, 2020, v. 129, n. 7, p. 653, doi. 10.1177/0003489420906180

By:

Masood, Maheer M.;
Mieczkowski, Piotr;
Malc, Ewa P.;
Foreman, Ann Katherine M.;
Evans, James P.;
Clark, J. Madison;
Rose, Austin S.

Publication type:

Article

Chronic Oxidative DNA Damage Due to DNA Repair Defects Causes Chromosomal Instability in Saccharomyces cerevisiae.

Published in:

Molecular & Cellular Biology, 2008, v. 28, n. 17, p. 5432, doi. 10.1128/MCB.00307-08

By:

Degtyareva, Natalya P.;
Lingling Chen;
Mieczkowski, Piotr;
Petes, Thomas D.;
Doetsch, Paul W.

Publication type:

Article

Unisexual and Heterosexual Meiotic Reproduction Generate Aneuploidy and Phenotypic Diversity De Novo in the Yeast Cryptococcus neoformans.

Published in:

PLoS Biology, 2013, v. 11, n. 9, p. 1, doi. 10.1371/journal.pbio.1001653

By:

Ni, Min;
Feretzaki, Marianna;
Li, Wenjun;
Floyd-Averette, Anna;
Mieczkowski, Piotr;
Dietrich, Fred S.;
Heitman, Joseph

Publication type:

Article

Moniliophthoraperniciosa, the causal agent of witches' broom disease of cacao, interferes with cytokinin metabolism during infection of Micro‐Tom tomato and promotes symptom development.

Published in:

New Phytologist, 2021, v. 231, n. 1, p. 365, doi. 10.1111/nph.17386

By:

Costa, Juliana L.;
Paschoal, Daniele;
Silva, Eder M.;
Silva, Jamille S.;
Carmo, Rafael M.;
Carrera, Esther;
López‐Díaz, Isabel;
Rossi, Mônica L.;
Freschi, Luciano;
Mieczkowski, Piotr;
Peres, Lazaro E. P.;
Teixeira, Paulo J. P. L.;
Figueira, Antonio

Publication type:

Article

Adaptation and selection shape clonal evolution of tumors during residual disease and recurrence.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18730-z

By:

Walens, Andrea;
Lin, Jiaxing;
Damrauer, Jeffrey S.;
McKinney, Brock;
Lupo, Ryan;
Newcomb, Rachel;
Fox, Douglas B.;
Mabe, Nathaniel W.;
Gresham, Jeremy;
Sheng, Zhecheng;
Sibley, Alexander B.;
De Buysscher, Tristan;
Kelkar, Hemant;
Mieczkowski, Piotr A.;
Owzar, Kouros;
Alvarez, James V.

Publication type:

Article

Nanoscale Detection of Ionizing Radiation Damage to DNA by Atomic Force Microscopy.

Published in:

Small, 2008, v. 4, n. 2, p. 288, doi. 10.1002/smll.200700527

By:

Ke, Changhong;
Jiang, Yong;
Mieczkowski, Piotr A.;
Muramoto, Garrett G.;
Chute, John P.;
Marszalek, Piotr E.

Publication type:

Article

Unraveling the complex genome of Saccharum spontaneum using Polyploid Gene Assembler.

Published in:

DNA Research, 2019, v. 26, n. 3, p. 205, doi. 10.1093/dnares/dsz001

By:

Nascimento, Leandro Costa;
Yanagui, Karina;
Jose, Juliana;
Camargo, Eduardo L O;
Grassi, Maria Carolina B;
Cunha, Camila P;
Bressiani, José Antonio;
Carvalho, Guilherme M A;
Carvalho, Carlos Roberto;
Prado, Paula F;
Mieczkowski, Piotr;
Pereira, Gonçalo A G;
Carazzolle, Marcelo F

Publication type:

Article

The Genome Sequence of Leishmania (Leishmania) amazonensis: Functional Annotation and Extended Analysis of Gene Models.

Published in:

DNA Research, 2013, v. 20, n. 6, p. 567, doi. 10.1093/dnares/dst031

By:

Real, Fernando;
Vidal, Ramon Oliveira;
Carazzolle, Marcelo Falsarella;
Mondego, Jorge Maurício Costa;
Costa, Gustavo Gilson Lacerda;
Herai, Roberto Hirochi;
Würtele, Martin;
de Carvalho, Lucas Miguel;
e Ferreira, Renata Carmona;
Mortara, Renato Arruda;
Barbiéri, Clara Lucia;
Mieczkowski, Piotr;
da Silveira, José Franco;
Briones, Marcelo Ribeiro da Silva;
Pereira, Gonçalo Amarante Guimarães;
Bahia, Diana

Publication type:

Article

Damage-induced localized hypermutability.

Published in:

Cell Cycle, 2011, v. 10, n. 7, p. 1073, doi. 10.4161/cc.10.7.15319

By:

Burch, Lauranell H.;
Yong Yang;
Sterling, Joan F.;
Roberts, Steven A.;
Chao, Frank G.;
Hong Xu;
Leilei Zhang;
Walsh, Jesse;
Resnick, Michael A.;
Mieczkowski, Piotr A.;
Gordenin, Dmitry A.

Publication type:

Article

Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-164

By:

Meinhardt, Lyndel W.;
Costa, Gustavo Gilson Lacerda;
Thomazella, Daniela P. T.;
Teixeira, Paulo José P. L.;
Carazzolle, Marcelo Falsarella;
Schuster, Stephan C.;
Carlson, John E.;
Guiltinan, Mark J.;
Mieczkowski, Piotr;
Farmer, Andrew;
Ramaraj, Thiruvarangan;
Crozier, Jayne;
Davis, Robert E.;
Shao, Jonathan;
Melnick, Rachel L.;
Pereira, Gonçalo A. G.;
Bailey, Bryan A.

Publication type:

Article

Variant calling in low-coverage whole genome sequencing of a Native American population sample.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-85

By:

Bizon, Chris;
Spiegel, Michael;
Chasse, Scott A.;
Gizer, Ian R.;
Yun Li;
Malc, Ewa P.;
Mieczkowski, Piotr A.;
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Global Analysis of the Relationship between the Binding of the Bas1p Transcription Factor and Meiosis-Specific Double-Strand DNA Breaks in Saccharomyces cerevisiae.

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Molecular & Cellular Biology, 2006, v. 26, n. 3, p. 24, doi. 10.1128/MCB.26.3.1014-1027.2006

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Mieczkowski, Piotr A.;
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The Sisal Virome: Uncovering the Viral Diversity of Agave Varieties Reveals New and Organ-Specific Viruses.

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Microorganisms, 2021, v. 9, n. 8, p. 1704, doi. 10.3390/microorganisms9081704

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Quintanilha-Peixoto, Gabriel;
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Mieczkowski, Piotr;
Olmo, Roenick Proveti;
Carazzolle, Marcelo Falsarella;
Voigt, Christian A.;
Soares, Ana Cristina Fermino;
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Practical innovations for high-throughput amplicon sequencing.

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Nature Methods, 2013, v. 10, n. 10, p. 999, doi. 10.1038/nmeth.2634

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Lundberg, Derek S;
Yourstone, Scott;
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Jones, Corbin D;
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Flavonoid supplementation affects the expression of genes involved in cell wall formation and lignification metabolism and increases sugar content and saccharification in the fast-growing eucalyptus hybrid E. urophylla x E. grandis

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BMC Plant Biology, 2014, v. 14, n. 1, p. 301, doi. 10.1186/s12870-014-0301-8

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Lepikson-Neto, Jorge;
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Salazar, Marcela M;
Camargo, Eduardo LO;
Cairo, João PF;
Teixeira, Paulo J;
Marques, Wesley L;
Squina, Fabio M;
Mieczkowski, Piotr;
Deckmann, Ana C;
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Contrasting nitrogen fertilization treatments impact xylem gene expression and secondary cell wall lignification in Eucalyptus.

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BMC Plant Biology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/s12870-014-0256-9

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Oliveira Camargo, Eduardo Leal;
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Lepikson-Neto, Jorge;
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Martinez, Yves;
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Rodrigues, José Carlos;
Grima-Pettenati, Jacqueline;
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PLoS Genetics, 2017, v. 13, n. 4, p. 1, doi. 10.1371/journal.pgen.1006667

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Chow, Eve W. L.;
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