Works by Meissner, Alexander

Results: 71
    1

    Enabling Consistency in Pluripotent Stem Cell-Derived Products for Research and Development and Clinical Applications Through Material Standards.

    Published in:
    Stem Cells Translational Medicine, 2015, v. 4, n. 3, p. 217, doi. 10.5966/sctm.2014-0233
    By:
    • FRENCH, ANNA;
    • BRAVERY, CHRISTOPHER;
    • SMITH, JAMES;
    • CHANDRA, AMIT;
    • ARCHIBALD, PETER;
    • GOLD, JOSEPH D.;
    • ARTZI, NATALIE;
    • HAE-WON KIM;
    • BARKER, RICHARD W.;
    • MEISSNER, ALEXANDER;
    • WU, JOSEPH C.;
    • KNOWLES, JONATHAN C.;
    • WILLIAMS, DAVID;
    • GARCÍA-CARDEÑA, GUILLERMO;
    • SIPP, DOUG;
    • OH, STEVE;
    • LORING, JEANNE F.;
    • RAO, MAHENDRA S.;
    • REEVE, BROCK;
    • WALL, IVAN
    Publication type:
    Article
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    Genome-scale DNA methylation maps of pluripotent and differentiated cells.

    Published in:
    Nature, 2008, v. 454, n. 7205, p. 766, doi. 10.1038/nature07107
    By:
    • Meissner, Alexander;
    • Mikkelsen, Tarjei S.;
    • Hongcang Gu;
    • Wernig, Marius;
    • Hanna, Jacob;
    • Sivachenko, Andrey;
    • Xiaolan Zhang;
    • Bernstein, Bradley E.;
    • Nusbaum, Chad;
    • Jaffe, David B.;
    • Gnirke, Andreas;
    • Jaenisch, Rudolf;
    • Lander, Eric S.
    Publication type:
    Article
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    Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.

    Published in:
    Nature, 2007, v. 448, n. 7153, p. 553, doi. 10.1038/nature06008
    By:
    • Mikkelsen, Tarjei S.;
    • Ku, Manching;
    • Jaffe, David B.;
    • Issac, Biju;
    • Lieberman, Erez;
    • Giannoukos, Georgia;
    • Alvarez, Pablo;
    • Brockman, William;
    • Tae-Kyung Kim;
    • Koche, Richard P.;
    • Lee, William;
    • Mendenhall, Eric;
    • O'Donovan, Aisling;
    • Presser, Aviva;
    • Russ, Carsten;
    • Xiaohui Xie;
    • Meissner, Alexander;
    • Wernig, Marius;
    • Jaenisch, Rudolf;
    • Nusbaum, Chad
    Publication type:
    Article
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    Dnmt3a is essential for hematopoietic stem cell differentiation.

    Published in:
    Nature Genetics, 2012, v. 44, n. 1, p. 23, doi. 10.1038/ng.1009
    By:
    • Challen, Grant A;
    • Sun, Deqiang;
    • Jeong, Mira;
    • Luo, Min;
    • Jelinek, Jaroslav;
    • Berg, Jonathan S;
    • Bock, Christoph;
    • Vasanthakumar, Aparna;
    • Gu, Hongcang;
    • Xi, Yuanxin;
    • Liang, Shoudan;
    • Lu, Yue;
    • Darlington, Gretchen J;
    • Meissner, Alexander;
    • Issa, Jean-Pierre J;
    • Godley, Lucy A;
    • Li, Wei;
    • Goodell, Margaret A
    Publication type:
    Article
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    Mammalian nuclear transfer.

    Published in:
    Developmental Dynamics, 2006, v. 235, n. 9, p. 2460
    By:
    • Alexander Meissner;
    • Rudolf Jaenisch
    Publication type:
    Article
    19

    Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells.

    Published in:
    Nature Genetics, 2015, v. 47, n. 5, p. 469, doi. 10.1038/ng.3258
    By:
    • Liao, Jing;
    • Karnik, Rahul;
    • Ziller, Michael J;
    • Clement, Kendell;
    • Tsankov, Alexander M;
    • Akopian, Veronika;
    • Gifford, Casey A;
    • Donaghey, Julie;
    • Galonska, Christina;
    • Pop, Ramona;
    • Mallard, William;
    • Rinn, John L;
    • Meissner, Alexander;
    • Gu, Hongcang;
    • Gnirke, Andreas;
    • Reyon, Deepak;
    • Tsai, Shengdar Q;
    • Joung, J Keith
    Publication type:
    Article
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    Smart-RRBS for single-cell methylome and transcriptome analysis.

    Published in:
    Nature Protocols, 2021, v. 16, n. 8, p. 4004, doi. 10.1038/s41596-021-00571-9
    By:
    • Gu, Hongcang;
    • Raman, Ayush T.;
    • Wang, Xiaoxue;
    • Gaiti, Federico;
    • Chaligne, Ronan;
    • Mohammad, Arman W.;
    • Arczewska, Aleksandra;
    • Smith, Zachary D.;
    • Landau, Dan A.;
    • Aryee, Martin J.;
    • Meissner, Alexander;
    • Gnirke, Andreas
    Publication type:
    Article
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    Information recovery from low coverage whole-genome bisulfite sequencing.

    Published in:
    Nature Communications, 2016, v. 7, n. 6, p. 11306, doi. 10.1038/ncomms11306
    By:
    • Libertini, Emanuele;
    • Heath, Simon C.;
    • Hamoudi, Rifat A.;
    • Gut, Marta;
    • Ziller, Michael J.;
    • Czyz, Agata;
    • Ruotti, Victor;
    • Stunnenberg, Hendrik G.;
    • Frontini, Mattia;
    • Ouwehand, Willem H.;
    • Meissner, Alexander;
    • Gut, Ivo G.;
    • Beck, Stephan
    Publication type:
    Article
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    DNA methylation signatures link prenatal famine exposure to growth and metabolism.

    Published in:
    Nature Communications, 2014, v. 5, n. 11, p. 5592, doi. 10.1038/ncomms6592
    By:
    • Tobi, Elmar W.;
    • Goeman, Jelle J.;
    • Monajemi, Ramin;
    • Gu, Hongcang;
    • Putter, Hein;
    • Zhang, Yanju;
    • Slieker, Roderick C.;
    • Stok, Arthur P.;
    • Thijssen, Peter E.;
    • Müller, Fabian;
    • van Zwet, Erik W.;
    • Bock, Christoph;
    • Meissner, Alexander;
    • Lumey, L. H.;
    • Eline Slagboom, P.;
    • Heijmans, Bastiaan T.
    Publication type:
    Article
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    Genome-wide tracking of dCas9-methyltransferase footprints.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02708-5
    By:
    • Galonska, Christina;
    • Charlton, Jocelyn;
    • Mattei, Alexandra L.;
    • Donaghey, Julie;
    • Clement, Kendell;
    • Hongcang Gu;
    • Mohammad, Arman W.;
    • Stamenova, Elena K.;
    • Cacchiarelli, Davide;
    • Klages, Sven;
    • Timmermann, Bernd;
    • Cantz, Tobias;
    • Schöler, Hans R.;
    • Gnirke, Andreas;
    • Ziller, Michael J.;
    • Meissner, Alexander
    Publication type:
    Article
    33

    What can epigenomics do for you?

    Published in:
    Genome Biology, 2012, v. 13, n. 10, p. 420, doi. 10.1186/gb-2012-13-10-420
    By:
    • Meissner, Alexander
    Publication type:
    Article
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    Epigenomics and chromatin dynamics

    Published in:
    Genome Biology, 2012, v. 13, n. 2, p. 313, doi. 10.1186/1465-6906-13-
    By:
    • Akopian, Veronika;
    • Chan, Michelle M;
    • Clement, Kendell;
    • Galonska, Christina;
    • Gifford, Casey A;
    • Lehtola, Elizabeth;
    • Liao, Jing;
    • Samavarchi-Tehrani, Payman;
    • Sindhu, Camille;
    • Smith, Zachary D;
    • Tsankov, Alexander M;
    • Webster, Jamie;
    • Yingying Zhang;
    • Ziller, Michael J;
    • Meissner, Alexander
    Publication type:
    Article
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    Recommendations for the design and analysis of epigenome-wide association studies.

    Published in:
    Nature Methods, 2013, v. 10, n. 10, p. 949, doi. 10.1038/nmeth.2632
    By:
    • Michels, Karin B;
    • Binder, Alexandra M;
    • Dedeurwaerder, Sarah;
    • Epstein, Charles B;
    • Greally, John M;
    • Gut, Ivo;
    • Houseman, E Andres;
    • Izzi, Benedetta;
    • Kelsey, Karl T;
    • Meissner, Alexander;
    • Milosavljevic, Aleksandar;
    • Siegmund, Kimberly D;
    • Bock, Christoph;
    • Irizarry, Rafael A
    Publication type:
    Article
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    T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation.

    Published in:
    eLife, 2023, p. 1, doi. 10.7554/eLife.83077
    By:
    • Landshammer, Alexandro;
    • Bolondi, Adriano;
    • Kretzmer, Helene;
    • Much, Christian;
    • Buschow, René;
    • Rose, Alina;
    • Hua-Jun;
    • Mackowiak, Sebastian D.;
    • Braendl, Bjoern;
    • Giesselmann, Pay;
    • Tornisiello, Rosaria;
    • Parsi, Krishna Mohan;
    • Huey, Jack;
    • Mielke, Thorsten;
    • Meierhofer, David;
    • Maehr, René;
    • Hnisz, Denes;
    • Michor, Franziska;
    • Rinn, John L.;
    • Meissner, Alexander
    Publication type:
    Article
    41
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    Epigenetic Hierarchy Governing Nestin Expression.

    Published in:
    Stem Cells, 2009, v. 27, n. 5, p. 1088, doi. 10.1002/stem.43
    By:
    • Dong Wook Han;
    • Jeong Tae Do;
    • Araúzo-Bravo, Marcos J.;
    • Sung Ho Lee;
    • Meissner, Alexander;
    • Hoon Taek Lee;
    • Jaenisch, Rudolf;
    • Schöler, Hans R.
    Publication type:
    Article
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    Charting a dynamic DNA methylation landscape of the human genome.

    Published in:
    Nature, 2013, v. 500, n. 7463, p. 477, doi. 10.1038/nature12433
    By:
    • Ziller, Michael J.;
    • Gu, Hongcang;
    • Müller, Fabian;
    • Donaghey, Julie;
    • Tsai, Linus T.-Y.;
    • Kohlbacher, Oliver;
    • De Jager, Philip L.;
    • Rosen, Evan D.;
    • Bennett, David A.;
    • Bernstein, Bradley E.;
    • Gnirke, Andreas;
    • Meissner, Alexander
    Publication type:
    Article
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    lincRNAs act in the circuitry controlling pluripotency and differentiation.

    Published in:
    Nature, 2011, v. 477, n. 7364, p. 295, doi. 10.1038/nature10398
    By:
    • Guttman, Mitchell;
    • Donaghey, Julie;
    • Carey, Bryce W.;
    • Garber, Manuel;
    • Grenier, Jennifer K.;
    • Munson, Glen;
    • Young, Geneva;
    • Lucas, Anne Bergstrom;
    • Ach, Robert;
    • Bruhn, Laurakay;
    • Yang, Xiaoping;
    • Amit, Ido;
    • Meissner, Alexander;
    • Regev, Aviv;
    • Rinn, John L.;
    • Root, David E.;
    • Lander, Eric S.
    Publication type:
    Article
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    Erratum: Notch inhibition allows oncogene-independent generation of iPS cells.

    Published in:
    Nature Chemical Biology, 2014, v. 10, n. 12, p. 1074, doi. 10.1038/nchembio1214-1074b
    By:
    • Ichida, Justin K;
    • W, Julia T C;
    • Williams, Luis A;
    • Carter, Ava C;
    • Shi, Yingxiao;
    • Moura, Marcelo T;
    • Ziller, Michael;
    • Singh, Sean;
    • Amabile, Giovanni;
    • Bock, Christoph;
    • Umezawa, Akihiro;
    • Rubin, Lee L;
    • Bradner, James E;
    • Akutsu, Hidenori;
    • Meissner, Alexander;
    • Eggan, Kevin
    Publication type:
    Article