Works matching AU Mehrshad, Maliheh

Results: 26

Niche-Aware Metagenomic Screening for Enzyme Methioninase Illuminates Its Contribution to Metabolic Syntrophy.

Published in:

Microbial Ecology, 2024, v. 87, n. 1, p. 1, doi. 10.1007/s00248-024-02458-0

By:

Khamespanah, Erfan;
Asad, Sedigheh;
Vanak, Zeynab;
Mehrshad, Maliheh

Publication type:

Article

Connectivity of Fennoscandian Shield terrestrial deep biosphere microbiomes with surface communities.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-021-02980-8

By:

Westmeijer, George;
Mehrshad, Maliheh;
Turner, Stephanie;
Alakangas, Linda;
Sachpazidou, Varvara;
Bunse, Carina;
Pinhassi, Jarone;
Ketzer, Marcelo;
Åström, Mats;
Bertilsson, Stefan;
Dopson, Mark

Publication type:

Article

A Genomic Perspective Across Earth's Microbiomes Reveals That Genome Size in Archaea and Bacteria Is Linked to Ecosystem Type and Trophic Strategy.

Published in:

Frontiers in Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fmicb.2021.761869

By:

Rodríguez-Gijón, Alejandro;
Nuy, Julia K.;
Mehrshad, Maliheh;
Buck, Moritz;
Schulz, Frederik;
Woyke, Tanja;
Garcia, Sarahi L.

Publication type:

Article

Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater.

Published in:

Nature Communications, 2021, v. 8, p. 1, doi. 10.1038/s41467-021-24549-z

By:

Mehrshad, Maliheh;
Lopez-Fernandez, Margarita;
Sundh, John;
Bell, Emma;
Simone, Domenico;
Buck, Moritz;
Bernier-Latmani, Rizlan;
Bertilsson, Stefan;
Dopson, Mark

Publication type:

Article

Candidatus Methylumidiphilus Drives Peaks in Methanotrophic Relative Abundance in Stratified Lakes and Ponds Across Northern Landscapes.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.669937

By:

Martin, Gaëtan;
Rissanen, Antti J.;
Garcia, Sarahi L.;
Mehrshad, Maliheh;
Buck, Moritz;
Peura, Sari

Publication type:

Article

Niche-directed evolution modulates genome architecture in freshwater Planctomycetes.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 4, p. 1056, doi. 10.1038/s41396-018-0332-5

By:

Andrei, Adrian-Ştefan;
Salcher, Michaela M.;
Mehrshad, Maliheh;
Rychtecký, Pavel;
Znachor, Petr;
Ghai, Rohit

Publication type:

Article

The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2018, v. 12, n. 3, p. 655, doi. 10.1038/s41396-017-0009-5

By:

Mehrshad, Maliheh;
Rodriguez-Valera, Francisco;
Amoozegar, Mohammad Ali;
López-García, Purificación;
Ghai, Rohit

Publication type:

Article

Metagenomic recovery of phage genomes of uncultured freshwater actinobacteria.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 1, p. 304, doi. 10.1038/ismej.2016.110

By:

Ghai, Rohit;
Mehrshad, Maliheh;
Megumi Mizuno, Carolina;
Rodriguez-Valera, Francisco

Publication type:

Article

DF-Phos: Prediction of Protein Phosphorylation Sites by Deep Forest.

Published in:

Journal of Biochemistry, 2024, v. 175, n. 4, p. 447, doi. 10.1093/jb/mvad116

By:

Zahiri, Zeynab;
Mehrshad, Nasser;
Mehrshad, Maliheh

Publication type:

Article

Continental scientific drilling and microbiology: (extremely) low biomass in crystalline bedrock of central Sweden.

Published in:

Biogeosciences Discussions, 2023, p. 1, doi. 10.5194/bg-2023-147

By:

Westmeijer, George;
Escudero, Cristina;
Bergin, Claudia;
Turner, Stephanie;
Ståhle, Magnus;
Mehrshad, Maliheh;
Leroy, Prune;
Buck, Moritz;
López-Hernández, Pilar;
Kallmeyer, Jens;
Amils, Ricardo;
Bertilsson, Stefan;
Dopson, Mark

Publication type:

Article

High-resolution metagenomic reconstruction of the freshwater spring bloom.

Published in:

Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-022-01451-4

By:

Kavagutti, Vinicius S.;
Bulzu, Paul-Adrian;
Chiriac, Cecilia M.;
Salcher, Michaela M.;
Mukherjee, Indranil;
Shabarova, Tanja;
Grujčić, Vesna;
Mehrshad, Maliheh;
Kasalický, Vojtěch;
Andrei, Adrian-Stefan;
Jezberová, Jitka;
Seďa, Jaromir;
Rychtecký, Pavel;
Znachor, Petr;
Šimek, Karel;
Ghai, Rohit

Publication type:

Article

Distinct microbial community along the chronic oil pollution continuum of the Persian Gulf converge with oil spill accidents.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-90735-0

By:

Rezaei Somee, Maryam;
Dastgheib, Seyed Mohammad Mehdi;
Shavandi, Mahmoud;
Ghanbari Maman, Leila;
Kavousi, Kaveh;
Amoozegar, Mohammad Ali;
Mehrshad, Maliheh

Publication type:

Article

Metagenomes and metatranscriptomes shed new light on the microbial-mediated sulfur cycle in a Siberian soda lake.

Published in:

BMC Biology, 2019, v. 17, n. 1, p. N.PAG, doi. 10.1186/s12915-019-0688-7

By:

Vavourakis, Charlotte D.;
Mehrshad, Maliheh;
Balkema, Cherel;
van Hall, Rutger;
Andrei, Adrian-Ştefan;
Ghai, Rohit;
Sorokin, Dimitry Y.;
Muyzer, Gerard

Publication type:

Article

Challenges in supplying empirical proof for predictions derived from Species Distribution Models (SDMs): the case of an invasive cyanobacterium.

Published in:

ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00264-2

By:

Meriggi, Carlotta;
Mehrshad, Maliheh;
Johnson, Richard K;
Laugen, Ane T;
Drakare, Stina

Publication type:

Article

Genome-resolved analyses show an extensive diversification in key aerobic hydrocarbon-degrading enzymes across bacteria and archaea.

Published in:

BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08906-w

By:

Somee, Maryam Rezaei;
Amoozegar, Mohammad Ali;
Dastgheib, Seyed Mohammad Mehdi;
Shavandi, Mahmoud;
Maman, Leila Ghanbari;
Bertilsson, Stefan;
Mehrshad, Maliheh

Publication type:

Article

mOTUpan: a robust Bayesian approach to leverage metagenome-assembled genomes for core-genome estimation.

Published in:

NAR Genomics & Bioinformatics, 2022, v. 4, n. 3, p. 1, doi. 10.1093/nargab/lqac060

By:

Buck, Moritz;
Mehrshad, Maliheh;
Bertilsson, Stefan

Publication type:

Article

Continental scientific drilling and microbiology: (extremely) low biomass in bedrock of central Sweden.

Published in:

Biogeosciences, 2024, v. 21, n. 2, p. 591, doi. 10.5194/bg-21-591-2024

By:

Westmeijer, George;
Escudero, Cristina;
Bergin, Claudia;
Turner, Stephanie;
Ståhle, Magnus;
Mehrshad, Maliheh;
Leroy, Prune;
Buck, Moritz;
López-Hernández, Pilar;
Kallmeyer, Jens;
Amils, Ricardo;
Bertilsson, Stefan;
Dopson, Mark

Publication type:

Article

The microbiome of the Black Sea water column analyzed by shotgun and genome centric metagenomics.

Published in:

Environmental Microbiome, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s40793-021-00374-1

By:

Cabello-Yeves, Pedro J.;
Callieri, Cristiana;
Picazo, Antonio;
Mehrshad, Maliheh;
Haro-Moreno, Jose M.;
Roda-Garcia, Juan J.;
Dzhembekova, Nina;
Slabakova, Violeta;
Slabakova, Nataliya;
Moncheva, Snejana;
Rodriguez-Valera, Francisco

Publication type:

Article

Publisher Correction: Hypersaline Lake Urmia: a potential hotspot for microbial genomic variation.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-27429-2

By:

Kheiri, Roohollah;
Mehrshad, Maliheh;
Pourbabaee, Ahmad Ali;
Ventosa, Antonio;
Amoozegar, Mohammad Ali

Publication type:

Article

Hypersaline Lake Urmia: a potential hotspot for microbial genomic variation.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-27429-2

By:

Kheiri, Roohollah;
Mehrshad, Maliheh;
Pourbabaee, Ahmad Ali;
Ventosa, Antonio;
Amoozegar, Mohammad Ali

Publication type:

Article

Hypersaline Lake Urmia: a potential hotspot for microbial genomic variation.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-27429-2

By:

Kheiri, Roohollah;
Mehrshad, Maliheh;
Pourbabaee, Ahmad Ali;
Ventosa, Antonio;
Amoozegar, Mohammad Ali

Publication type:

Article

Genome-resolved insight into the reservoir of antibiotic resistance genes in aquatic microbial community.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-25026-3

By:

Goodarzi, Zahra;
Asad, Sedigheh;
Mehrshad, Maliheh

Publication type:

Article

Correction to: Phage-centric ecological interactions in aquatic ecosystems revealed through ultra-deep metagenomics.

Published in:

2020

By:

Kavagutti, Vinicius S.;
Andrei, Adrian-Ştefan;
Mehrshad, Maliheh;
Salcher, Michaela M.;
Ghai, Rohit

Publication type:

Correction Notice

Phage-centric ecological interactions in aquatic ecosystems revealed through ultra-deep metagenomics.

Published in:

Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0752-0

By:

Kavagutti, Vinicius S.;
Andrei, Adrian-Ştefan;
Mehrshad, Maliheh;
Salcher, Michaela M.;
Ghai, Rohit

Publication type:

Article

Hidden in plain sight—highly abundant and diverse planktonic freshwater Chloroflexi.

Published in:

Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0563-8

By:

Mehrshad, Maliheh;
Salcher, Michaela M;
Okazaki, Yusuke;
Nakano, Shin-ichi;
Šimek, Karel;
Andrei, Adrian-Stefan;
Ghai, Rohit

Publication type:

Article

A metagenomics roadmap to the uncultured genome diversity in hypersaline soda lake sediments.

Published in:

Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0548-7

By:

Vavourakis, Charlotte D.;
Andrei, Adrian-Stefan;
Mehrshad, Maliheh;
Ghai, Rohit;
Sorokin, Dimitry Y.;
Muyzer, Gerard

Publication type:

Article