OpenURL Connection Search

Select item for more details and to access through your institution.

Exome sequencing identifies nonsegregating nonsense ATM and PALB2 variants in familial pancreatic cancer.
Published in:
Human Genomics, 2013, v. 7, p. 1, doi. 10.1186/1479-7364-7-11
By:
- Grant, Robert C.;
- Al-Sukhni, Wigdan;
- Borgida, Ayelet E.;
- Holter, Spring;
- Kanji, Zaheer S.;
- McPherson, Treasa;
- Whelan, Emily;
- Serra, Stefano;
- Trinh, Quang M.;
- Peltekova, Vanya;
- Stein, Lincoln D.;
- McPherson, John D.;
- Gallinger, Steven
Publication type:
Article
Characteristics of amelanotic acantholytic‐like melanoma resembling squamous cell carcinoma.
Published in:
Journal of Cutaneous Pathology, 2022, v. 49, n. 5, p. 500, doi. 10.1111/cup.14210
By:
- Dang, Luke T.;
- Terrell, Jessica R.;
- Konia, Thomas;
- Fung, Maxwell A.;
- McPherson, John D.;
- Kiuru, Maija
Publication type:
Article
A cancer cell-line titration series for evaluating somatic classification.
Published in:
BMC Research Notes, 2015, v. 8, p. 1, doi. 10.1186/s13104-015-1803-7
By:
- Denroche, Robert E.;
- Mullen, Laura;
- Timms, Lee;
- Beck, Timothy;
- Yung, Christina K.;
- Stein, Lincoln;
- McPherson, John D.;
- Brown, Andrew M. K.
Publication type:
Article
Elevated Coding Mutation Rate During the Reprogramming of Human Somatic Cells into Induced Pluripotent Stem Cells.
Published in:
Stem Cells, 2012, v. 30, n. 3, p. 435, doi. 10.1002/stem.1011
By:
- Ji, Junfeng;
- Ng, Siemon H.;
- Sharma, Vivek;
- Neculai, Dante;
- Hussein, Samer;
- Sam, Michelle;
- Trinh, Quang;
- Church, George M.;
- Mcpherson, John D.;
- Nagy, Andras;
- Batada, Nizar N.
Publication type:
Article
SeqControl: process control for DNA sequencing.
Published in:
Nature Methods, 2014, v. 11, n. 10, p. 1071, doi. 10.1038/nmeth.3094
By:
- Chong, Lauren C;
- Albuquerque, Marco A;
- Harding, Nicholas J;
- Caloian, Cristian;
- Chan-Seng-Yue, Michelle;
- de Borja, Richard;
- Fraser, Michael;
- Denroche, Robert E;
- Beck, Timothy A;
- van der Kwast, Theodorus;
- Bristow, Robert G;
- McPherson, John D;
- Boutros, Paul C
Publication type:
Article
A defining decade in DNA sequencing.
Published in:
Nature Methods, 2014, v. 11, n. 10, p. 1003, doi. 10.1038/nmeth.3106
By:
- McPherson, John D
Publication type:
Article
Next-generation gap.
Published in:
Nature Methods, 2009, v. 6, p. S2, doi. 10.1038/nmeth.f.268
By:
- McPherson, John D
Publication type:
Article
Progress in sequencing the mouse genome.
Published in:
Genesis: The Journal of Genetics & Development, 2001, v. 31, n. 4, p. 137, doi. 10.1002/gene.10016
By:
- Lindblad-Toh, Kerstin;
- Lander, Eric S.;
- McPherson, John D.;
- Waterston, Robert H.;
- Rodgers, Jane;
- Birney, Ewan
Publication type:
Article
A Two-Dimensional Pooling Strategy for Rare Variant Detection on Next-Generation Sequencing Platforms.
Published in:
PLoS ONE, 2014, v. 9, n. 4, p. 1, doi. 10.1371/journal.pone.0093455
By:
- Zuzarte, Philip C.;
- Denroche, Robert E.;
- Fehringer, Gordon;
- Katzov-Eckert, Hagit;
- Hung, Rayjean J.;
- McPherson, John D.
Publication type:
Article
Use of Sequenom Sample ID Plus® SNP Genotyping in Identification of FFPE Tumor Samples.
Published in:
PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0088163
By:
- Miller, Jessica K.;
- Buchner, Nicholas;
- Timms, Lee;
- Tam, Shirley;
- Luo, Xuemei;
- Brown, Andrew M. K.;
- Pasternack, Danielle;
- Bristow, Robert G.;
- Fraser, Michael;
- Boutros, Paul C.;
- McPherson, John D.
Publication type:
Article
Neuropathological Applications of Microscopy with Ultraviolet Surface Excitation (MUSE): A Concordance Study of Human Primary and Metastatic Brain Tumors.
Published in:
Brain Sciences (2076-3425), 2024, v. 14, n. 1, p. 108, doi. 10.3390/brainsci14010108
By:
- Lechpammer, Mirna;
- Todd, Austin;
- Tang, Vivian;
- Morningstar, Taryn;
- Borowsky, Alexander;
- Shahlaie, Kiarash;
- Kintner, John A.;
- McPherson, John D.;
- Bishop, John W.;
- Fereidouni, Farzad;
- Harmany, Zachary T.;
- Coley, Nicholas;
- Zagzag, David;
- Wong, Jason W. H.;
- Tao, Jiang;
- Hesson, Luke B.;
- Burnett, Leslie;
- Levenson, Richard
Publication type:
Article
Environmental pesticide exposure and non-Hodgkin lymphoma survival: a population-based study.
Published in:
BMC Medicine, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12916-022-02348-7
By:
- Poh, Christina;
- McPherson, John D.;
- Tuscano, Joseph;
- Li, Qian;
- Parikh-Patel, Arti;
- Vogel, Christoph F. A.;
- Cockburn, Myles;
- Keegan, Theresa
Publication type:
Article
Environmental pesticide exposure and non-Hodgkin lymphoma survival: a population-based study.
Published in:
2022
By:
- Poh, Christina;
- McPherson, John D.;
- Tuscano, Joseph;
- Li, Qian;
- Parikh-Patel, Arti;
- Vogel, Christoph F. A.;
- Cockburn, Myles;
- Keegan, Theresa
Publication type:
journal article
ShatterProof: operational detection and quantification of chromothripsis.
Published in:
BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-78
By:
- Govind, Shaylan K.;
- Zia, Amin;
- Hennings-Yeomans, Pablo H.;
- Watson, John D.;
- Fraser, Michael;
- Anghel, Catalina;
- Wyatt, Alexander W.;
- van der Kwast, Theodorus;
- Collins, Colin C.;
- McPherson, John D.;
- Bristow, Robert G.;
- Boutros, Paul C.
Publication type:
Article
Genomic Support for a Moa–Tinamou Clade and Adaptive Morphological Convergence in Flightless Ratites.
Published in:
Molecular Biology & Evolution, 2014, v. 31, n. 7, p. 1686, doi. 10.1093/molbev/msu153
By:
- Baker, Allan J.;
- Haddrath, Oliver;
- McPherson, John D.;
- Cloutier, Alison
Publication type:
Article
ACADEMIC DISQUALIFICATION AND PERSISTENCE TO GRADUATION BY FINANCIAL AID CATEGORY AND ACADEMIC ABILITY.
Published in:
Journal of College Student Retention: Research, Theory & Practice, 2006, v. 8, n. 2, p. 185, doi. 10.2190/0W0K-L75B-HJJW-FLLX
By:
- ROGER D. WESSEL;
- CAROLYN L. BELL;
- JOHN D. MCPHERSON;
- MICHAEL T. COSTELLO;
- JIM A. JONES
Publication type:
Article
The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes.
Published in:
PLoS Computational Biology, 2009, v. 5, n. 12, p. 1, doi. 10.1371/journal.pcbi.1000593
By:
- Angly, Florent E.;
- Willner, Dana;
- Prieto-Davó, Alejandra;
- Edwards, Robert A.;
- Schmieder, Robert;
- Vega-Thurber, Rebecca;
- Antonopoulos, Dionysios A.;
- Barott, Katie;
- Cottrell, Matthew T.;
- Desnues, Christelle;
- Dinsdale, Elizabeth A.;
- Furlan, Mike;
- Haynes, Matthew;
- Henn, Matthew R.;
- Yongfei Hu;
- Kirchman, David L.;
- McDole, Tracey;
- McPherson, John D.;
- Meyer, Folker;
- Miller, R. Michael
Publication type:
Article
Optimization of miRNA-seq data preprocessing.
Published in:
Briefings in Bioinformatics, 2015, v. 16, n. 6, p. 950, doi. 10.1093/bib/bbv019
By:
- Tam, Shirley;
- Ming-Sound Tsao;
- McPherson, John D.
Publication type:
Article
SCALP syndrome with a germline heterozygous DOCK6 mutation and somatic mosaic NRAS Q61R mutation.
Published in:
Pediatric Dermatology, 2023, v. 40, n. 3, p. 523, doi. 10.1111/pde.15184
By:
- Meyer, Summer N.;
- Simmons, Elanee M.;
- McPherson, John D.;
- Awasthi, Smita;
- Kiuru, Maija
Publication type:
Article
Levodopa‐responsive aromatic L–amino acid decarboxylase deficiency.
Published in:
Annals of Neurology, 2004, v. 55, n. 3, p. 435
By:
- Yuh Terng Chang;
- Radhakant Sharma;
- J. Lawrence Marsh;
- John D. McPherson;
- Joey A. Bedell;
- Andreas Knust;
- Christa Bräutigam;
- Georg F. Hoffmann;
- Keith Hyland
Publication type:
Article
Forum for the genomic onslaught.
Published in:
Nature, 2001, v. 413, n. 6857, p. 676, doi. 10.1038/35099618
By:
- McPherson, John D.
Publication type:
Article
A physical map of the human Y chromosome.
Published in:
Nature, 2001, v. 409, n. 6822, p. 943, doi. 10.1038/35057170
By:
- Tilford, Charles A.;
- Kuroda-Kawaguchi, Tomoko;
- Skaletsky, Helen;
- Rozen, Steve;
- Brown, Laura G.;
- Rosenberg, Michael;
- McPherson, John D.;
- Wylie, Kristine;
- Sekhon, Mandeep;
- Kucaba, Tamara A.;
- Waterston, Robert H.;
- Page, David C.
Publication type:
Article
A physical map of the human genome.
Published in:
Nature, 2001, v. 409, n. 6822, p. 934
By:
- McPherson, John D.;
- Marra, Marco;
- Hillier, LaDeana;
- Waterston, Robert H.;
- Chinwalla, Asif;
- Wallis, John;
- Sekhon, Mandeep;
- Wylie, Kristine;
- Mardis, Elaine R.;
- Wilson, Richard K.;
- Fulton, Robert;
- Kucaba, Tamara A.;
- Wagner-McPherson, Caryn;
- Barbazuk, William B.;
- Gregory, Simon G.;
- Humphray, Sean J.;
- French, Lisa;
- Evans, Richard S.;
- Bethel, Graeme;
- Whittaker, Adam
Publication type:
Article
GLI2 inhibition abrogates human leukemia stem cell dormancy.
Published in:
Journal of Translational Medicine, 2015, v. 13, n. 1, p. 1, doi. 10.1186/s12967-015-0453-9
By:
- Sadarangani, Anil;
- Pineda, Gabriel;
- Lennon, Kathleen M.;
- Hye-Jung Chun;
- Alice Shih;
- Schairer, Annelie E.;
- Court, Angela C.;
- Goff, Daniel J.;
- Prashad, Sacha L.;
- Geron, Ifat;
- Wall, Russell;
- McPherson, John D.;
- Moore, Richard A.;
- Minya Pu;
- Lei Bao;
- Jackson-Fisher, Amy;
- Munchhof, Michael;
- VanArsdale, Todd;
- Reya, Tannishtha;
- Morris, Sheldon R.
Publication type:
Article
GLI2 inhibition abrogates human leukemia stem cell dormancy.
Published in:
2015
By:
- Sadarangani, Anil;
- Pineda, Gabriel;
- Lennon, Kathleen M;
- Chun, Hye-Jung;
- Shih, Alice;
- Schairer, Annelie E;
- Court, Angela C;
- Goff, Daniel J;
- Prashad, Sacha L;
- Geron, Ifat;
- Wall, Russell;
- McPherson, John D;
- Moore, Richard A;
- Pu, Minya;
- Bao, Lei;
- Jackson-Fisher, Amy;
- Munchhof, Michael;
- VanArsdale, Todd;
- Reya, Tannishtha;
- Morris, Sheldon R
Publication type:
journal article
Lineage-Specific Expansions of Retroviral Insertions within the Genomes of African Great Apes but Not Humans and Orangutans.
Published in:
PLoS Biology, 2005, v. 3, n. 4, p. 577, doi. 10.1371/journal.pbio.0030110
By:
- Yohn, Chris T.;
- Jiang, Zhaoshi;
- McGrath, Sean D.;
- Hayden, Karen E.;
- Khaitovich, Philipp;
- Johnson, Matthew E.;
- Eichler, Marla Y.;
- McPherson, John D.;
- Zhao, Shaying;
- Pääbo, Svante;
- Eichler, Evan E.
Publication type:
Article
Molecular cytogenetic delineation of the critical deleted region in the 5q− syndrome.
Published in:
Genes, Chromosomes & Cancer, 1998, v. 22, n. 3, p. 251, doi. 10.1002/(SICI)1098-2264(199807)22:3<251::AID-GCC11>3.0.CO;2-R
By:
- Jaju, Rina J.;
- Boultwood, Jacqueline;
- Oliver, Fiona J.;
- Kostrzewa, Markus;
- Fidler, Carrie;
- Parker, Norman;
- McPherson, John D.;
- Morris, Stephan W.;
- Müller, Ulrich;
- Wainscoat, James S.;
- Kearney, Lyndal
Publication type:
Article
Comparative toxicoproteogenomics of mouse and rat liver identifies TCDD-resistance genes.
Published in:
Archives of Toxicology, 2019, v. 93, n. 10, p. 2961, doi. 10.1007/s00204-019-02560-0
By:
- Prokopec, Stephenie D.;
- Lu, Aileen;
- Lee, Sandy Che-Eun S.;
- Yao, Cindy Q.;
- Sun, Ren X.;
- Watson, John D.;
- Soliymani, Rabah;
- de Borja, Richard;
- Wong, Ada;
- Sam, Michelle;
- Zuzarte, Philip;
- McPherson, John D.;
- Okey, Allan B.;
- Pohjanvirta, Raimo;
- Boutros, Paul C.
Publication type:
Article
Corrigendum: Identification of pre-leukaemic haematopoietic stem cells in acute leukaemia.
Published in:
Nature, 2014, v. 508, n. 7496, p. 420, doi. 10.1038/nature13190
By:
- Shlush, Liran I.;
- Zandi, Sasan;
- Mitchell, Amanda;
- Chen, Weihsu Claire;
- Brandwein, Joseph M.;
- Gupta, Vikas;
- Kennedy, James A.;
- Schimmer, Aaron D.;
- Schuh, Andre C.;
- Yee, Karen W.;
- McLeod, Jessica L.;
- Doedens, Monica;
- Medeiros, Jessie J. F.;
- Marke, Rene;
- Kim, Hyeoung Joon;
- Lee, Kwon;
- McPherson, John D.;
- Hudson, Thomas J.;
- Pan-Leukemia Gene Panel Consortium, The HALT;
- Brown, Andrew M. K.
Publication type:
Article
Identification of pre-leukaemic haematopoietic stem cells in acute leukaemia.
Published in:
Nature, 2014, v. 506, n. 7488, p. 328, doi. 10.1038/nature13038
By:
- Shlush, Liran I.;
- Zandi, Sasan;
- Mitchell, Amanda;
- Chen, Weihsu Claire;
- Brandwein, Joseph M.;
- Gupta, Vikas;
- Kennedy, James A.;
- Schimmer, Aaron D.;
- Schuh, Andre C.;
- Yee, Karen W.;
- McLeod, Jessica L.;
- Doedens, Monica;
- Medeiros, Jessie J. F.;
- Marke, Rene;
- Kim, Hyeoung Joon;
- Lee, Kwon;
- McPherson, John D.;
- Hudson, Thomas J.;
- Pan-Leukemia Gene Panel Consortium, The HALT;
- Brown, Andrew M. K.
Publication type:
Article
Dr.Nod: computational framework for discovery of regulatory non-coding drivers in tissue-matched distal regulatory elements.
Published in:
Nucleic Acids Research, 2023, v. 51, n. 4, p. e23, doi. 10.1093/nar/gkac1251
By:
- Tomkova, Marketa;
- Tomek, Jakub;
- Chow, Julie;
- McPherson, John D;
- Segal, David J;
- Hormozdiari, Fereydoun
Publication type:
Article
Mitochondrial mutations drive prostate cancer aggression.
Published in:
Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00377-y
By:
- Hopkins, Julia F.;
- Sabelnykova, Veronica Y.;
- Weischenfeldt, Joachim;
- Simon, Ronald;
- Aguiar, Jennifer A.;
- Alkallas, Rached;
- Heisler, Lawrence E.;
- Zhang, Junyan;
- Watson, John D.;
- Chua, Melvin L. K.;
- Fraser, Michael;
- Favero, Francesco;
- Lawerenz, Chris;
- Plass, Christoph;
- Sauter, Guido;
- McPherson, John D.;
- van der Kwast, Theodorus;
- Korbel, Jan;
- Schlomm, Thorsten;
- Bristow, Robert G.
Publication type:
Article
Genomic testing in cancer: Patient knowledge, attitudes, and expectations.
Published in:
Cancer (0008543X), 2014, v. 120, n. 19, p. 3066, doi. 10.1002/cncr.28807
By:
- Blanchette, Phillip S.;
- Spreafico, Anna;
- Miller, Fiona A.;
- Chan, Kelvin;
- Bytautas, Jessica;
- Kang, Steve;
- Bedard, Philippe L.;
- Eisen, Andrea;
- Potanina, Larissa;
- Holland, Jack;
- Kamel‐Reid, Suzanne;
- McPherson, John D.;
- Razak, Albiruni R.;
- Siu, Lillian L.
Publication type:
Article
Regional perturbation of gene transcription is associated with intrachromosomal rearrangements and gene fusion transcripts in high grade ovarian cancer.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-39878-9
By:
- Krzyzanowski, Paul M.;
- Sircoulomb, Fabrice;
- Yousif, Fouad;
- Normand, Josee;
- La Rose, Jose;
- E. Francis, Kyle;
- Suarez, Fernando;
- Beck, Tim;
- McPherson, John D.;
- Stein, Lincoln D.;
- Rottapel, Robert K.
Publication type:
Article
A distinct subpopulation of leukemia initiating cells in acute precursor B lymphoblastic leukemia: quiescent phenotype and unique transcriptomic profile.
Published in:
Frontiers in Oncology, 2022, v. 12, p. 01, doi. 10.3389/fonc.2022.972323
By:
- Lee, Alex Q.;
- Hiroaki Konishi;
- Duong, Connie;
- Sakiko Yoshida;
- Davis, Ryan R.;
- Van Dyke, Jonathan E.;
- Masami Ijiri;
- McLaughlin, Bridget;
- Kyoungmi Kim;
- Yueju Li;
- Beckett, Laurel;
- Nitin, Nitin;
- McPherson, John D.;
- Tepper, Clifford G.;
- Noriko Satake
Publication type:
Article
Germline and somatic DNA repair gene alterations in prostate cancer.
Published in:
2020
By:
- Dall'Era, Marc A.;
- McPherson, John D.;
- Gao, Allen C.;
- DeVere White, Ralph W.;
- Gregg, Jeffrey P.;
- Lara, Primo N.;
- Lara, Primo N Jr
Publication type:
journal article
A single nucleotide difference that alters splicing patterns distinguishes the SMA gene SMN1 from the copy gene SMN2.
Published in:
Human Molecular Genetics, 1999, v. 8, n. 7, p. 1177, doi. 10.1093/hmg/8.7.1177
By:
- Monani, Umrao R.;
- Lorson, Christian L.;
- Parsons, D. William;
- Prior, Thomas W.;
- Androphy, Elliot J.;
- Burghes, Arthur H. M.;
- McPherson, John D.
Publication type:
Article
Molecular refinement of the 1p36 deletion syndrome reveals size diversity and a preponderance of maternally derived deletions.
Published in:
Human Molecular Genetics, 1999, v. 8, n. 2, p. 313
By:
- Wu, Yuan-Qing;
- Heilstedt, Heidi A.;
- Bedell, Joseph A.;
- May, Kristin M.;
- Starkey, David E.;
- McPherson, John D.;
- Shapira, Stuart K.;
- Shaffer, Lisa G.
Publication type:
Article
High resolution physical map of the region surrounding the spinal muscular atrophy gene.
Published in:
Human Molecular Genetics, 1993, v. 2, n. 8, p. 1169
By:
- Thompson, Terrl G.;
- Morrison, Karen E.;
- Kleyn, Patrick;
- Bengtsson, Ulla;
- Gilliam, T.Conrad;
- Davies, Kay E.;
- Wasmuth, John J.;
- McPherson, John D.
Publication type:
Article
ISOWN: accurate somatic mutation identification in the absence of normal tissue controls.
Published in:
Genome Medicine, 2017, v. 9, p. 1, doi. 10.1186/s13073-017-0446-9
By:
- Kalatskaya, Irina;
- Quang M. Trinh;
- Spears, Melanie;
- McPherson, John D.;
- Bartlett, John M. S.;
- Stein, Lincoln
Publication type:
Article

Found: 40