Found: 23
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Demuxafy: improvement in droplet assignment by integrating multiple single-cell demultiplexing and doublet detection methods.
- Published in:
- Genome Biology, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s13059-024-03224-8
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- Article
A comparison of marker gene selection methods for single-cell RNA sequencing data.
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- Genome Biology, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s13059-024-03183-0
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- Article
sgcocaller and comapr: personalised haplotype assembly and comparative crossover map analysis using single-gamete sequencing data.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 20, p. e118, doi. 10.1093/nar/gkac764
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- Article
Trade-off between conservation of biological variation and batch effect removal in deep generative modeling for single-cell transcriptomics.
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- BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-05003-3
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- Article
SSNIP-seq: A simple and rapid method for isolation of single-sperm nucleic acid for high-throughput sequencing.
- Published in:
- PLoS ONE, 2022, v. 17, n. 9, p. 1, doi. 10.1371/journal.pone.0275168
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- Article
splatPop: simulating population scale single-cell RNA sequencing data.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02546-1
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- Article
Optimizing expression quantitative trait locus mapping workflows for single-cell studies.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02407-x
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- Article
Personalized genome structure via single gamete sequencing.
- Published in:
- Genome Biology, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s13059-021-02327-w
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- Publication type:
- Article
Properties of structural variants and short tandem repeats associated with gene expression and complex traits.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16482-4
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- Article
Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats.
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- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16481-5
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- Article
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects.
- Published in:
- Nature Biotechnology, 2020, v. 38, n. 6, p. 747, doi. 10.1038/s41587-020-0469-4
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- Article
Publisher Correction: Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression.
- Published in:
- 2020
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- Publication type:
- Correction Notice
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-14457-z
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- Publication type:
- Article
Eleven grand challenges in single-cell data science.
- Published in:
- Genome Biology, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s13059-020-1926-6
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- Publication type:
- Article
Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype reference.
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- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1865-2
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- Publication type:
- Article
Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity.
- Published in:
- Genome Biology, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s13059-019-1644-0
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- Publication type:
- Article
f-scLVM: scalable and versatile factor analysis for single-cell RNA-seq.
- Published in:
- Genome Biology, 2017, v. 18, p. 1, doi. 10.1186/s13059-017-1334-8
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- Publication type:
- Article
Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R.
- Published in:
- Bioinformatics, 2017, v. 33, n. 8, p. 1179, doi. 10.1093/bioinformatics/btw777
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- Publication type:
- Article
Detecting Differential Expression in RNA-sequence Data Using Quasi-likelihood with Shrunken Dispersion Estimates.
- Published in:
- Statistical Applications in Genetics & Molecular Biology, 2012, v. 11, n. 5, p. -1, doi. 10.1515/1544-6115.1826
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- Publication type:
- Article
Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation.
- Published in:
- Nucleic Acids Research, 2012, v. 40, n. 10, p. 4288, doi. 10.1093/nar/gks042
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- Publication type:
- Article
Aliskiren increases bradykinin and tissue kallikrein mRNA levels in the heart.
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- Clinical & Experimental Pharmacology & Physiology, 2011, v. 38, n. 9, p. 623, doi. 10.1111/j.1440-1681.2011.05572.x
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- Article
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
- Published in:
- Bioinformatics, 2010, v. 26, n. 1, p. 139, doi. 10.1093/bioinformatics/btp616
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- Publication type:
- Article
Testing significance relative to a fold-change threshold is a TREAT.
- Published in:
- Bioinformatics, 2009, v. 25, n. 6, p. 765, doi. 10.1093/bioinformatics/btp053
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- Publication type:
- Article