Works by Mauri, Giancarlo

Results: 107

Preface.

Published in:

Natural Computing, 2024, v. 23, n. 1, p. 1, doi. 10.1007/s11047-023-09966-x

By:

Bandini, Stefania;
Chopard, Bastien;
Mauri, Giancarlo

Publication type:

Article

Spiking neural P systems: main ideas and results.

Published in:

Natural Computing, 2022, v. 21, n. 4, p. 629, doi. 10.1007/s11047-022-09917-y

By:

Leporati, Alberto;
Mauri, Giancarlo;
Zandron, Claudio

Publication type:

Article

Preface.

Published in:

Natural Computing, 2022, v. 21, n. 3, p. 359, doi. 10.1007/s11047-022-09898-y

By:

Gwizdałła, Tomasz;
Manzoni, Luca;
Mauri, Giancarlo

Publication type:

Article

Preface.

Published in:

2019

By:

Mauri, Giancarlo;
El Yacoubi, Samira;
Bandini, Stefania

Publication type:

Editorial

GTVCUT for neuro-radiosurgery treatment planning: an MRI brain cancer seeded image segmentation method based on a cellular automata model.

Published in:

Natural Computing, 2018, v. 17, n. 3, p. 521, doi. 10.1007/s11047-017-9636-z

By:

Rundo, Leonardo;
Militello, Carmelo;
Russo, Giorgio;
Vitabile, Salvatore;
Gilardi, Maria Carla;
Mauri, Giancarlo

Publication type:

Article

Preface.

Published in:

2018

By:

Bandini, Stefania;
Yacoubi, Samira El;
Mauri, Giancarlo;
Wąs, Jarosław

Publication type:

Proceeding

Monodirectional P systems.

Published in:

Natural Computing, 2016, v. 15, n. 4, p. 551, doi. 10.1007/s11047-016-9565-2

By:

Leporati, Alberto;
Manzoni, Luca;
Mauri, Giancarlo;
Porreca, Antonio;
Zandron, Claudio

Publication type:

Article

Foreword: asynchronous behavior of cellular automata and discrete models.

Published in:

Natural Computing, 2015, v. 14, n. 4, p. 505, doi. 10.1007/s11047-015-9524-3

By:

Dennunzio, Alberto;
Formenti, Enrico;
Mauri, Giancarlo;
Worsch, Thomas

Publication type:

Article

A local landscape mapping method for protein structure prediction in the HP model.

Published in:

Natural Computing, 2014, v. 13, n. 3, p. 309, doi. 10.1007/s11047-014-9427-8

By:

Citrolo, Andrea;
Mauri, Giancarlo

Publication type:

Article

An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes.

Published in:

Natural Computing, 2014, v. 13, n. 3, p. 321, doi. 10.1007/s11047-014-9439-4

By:

Damiani, Chiara;
Pescini, Dario;
Colombo, Riccardo;
Molinari, Sara;
Alberghina, Lilia;
Vanoni, Marco;
Mauri, Giancarlo

Publication type:

Article

Preface.

Published in:

2014

By:

Graudenzi, Alex;
Caravagna, Giulio;
Mauri, Giancarlo

Publication type:

Editorial

<i>m</i>-Asynchronous cellular automata: from fairness to quasi-fairness.

Published in:

Natural Computing, 2013, v. 12, n. 4, p. 561, doi. 10.1007/s11047-013-9386-5

By:

Dennunzio, Alberto;
Formenti, Enrico;
Manzoni, Luca;
Mauri, Giancarlo

Publication type:

Article

A study on learning robustness using asynchronous 1D cellular automata rules.

Published in:

Natural Computing, 2012, v. 11, n. 2, p. 289, doi. 10.1007/s11047-012-9311-3

By:

Vanneschi, Leonardo;
Mauri, Giancarlo

Publication type:

Article

P systems with active membranes: trading time for space.

Published in:

Natural Computing, 2011, v. 10, n. 1, p. 167, doi. 10.1007/s11047-010-9189-x

By:

Porreca, Antonio E.;
Leporati, Alberto;
Mauri, Giancarlo;
Zandron, Claudio

Publication type:

Article

Complexity aspects of polarizationless membrane systems.

Published in:

Natural Computing, 2009, v. 8, n. 4, p. 703, doi. 10.1007/s11047-008-9100-1

By:

Alberto Leporati;
Claudio Ferretti;
Giancarlo Mauri;
Mario Pérez-Jiménez;
Claudio Zandron

Publication type:

Article

Uniform solutions to SAT and Subset Sum by spiking neural P systems.

Published in:

Natural Computing, 2009, v. 8, n. 4, p. 681, doi. 10.1007/s11047-008-9091-y

By:

Alberto Leporati;
Giancarlo Mauri;
Claudio Zandron;
Mario PÃ©rez-JimÃ©nez

Publication type:

Article

GPU-powered model analysis with PySB/cupSODA.

Published in:

Bioinformatics, 2017, v. 33, n. 21, p. 3492, doi. 10.1093/bioinformatics/btx420

By:

Harris, Leonard A.;
Nobile, Marco S.;
Pino, James C.;
Lubbock, Alexander L. R.;
Besozzi, Daniela;
Mauri, Giancarlo;
Cazzaniga, Paolo;
Lopez, Carlos F.

Publication type:

Article

popFBA: tackling intratumour heterogeneity with Flux Balance Analysis.

Published in:

Bioinformatics, 2017, v. 33, n. 14, p. i311, doi. 10.1093/bioinformatics/btx251

By:

Damiani, Chiara;
Di Filippo, Marzia;
Pescini, Dario;
Maspero, Davide;
Colombo, Riccardo;
Mauri, Giancarlo

Publication type:

Article

TRONCO: an R package for the inference of cancer progression models from heterogeneous genomic data.

Published in:

Bioinformatics, 2016, v. 32, n. 12, p. 1911, doi. 10.1093/bioinformatics/btw035

By:

De Sano, Luca;
Caravagna, Giulio;
Ramazzotti, Daniele;
Graudenzi, Alex;
Mauri, Giancarlo;
Mishra, Bud;
Antoniotti, Marco

Publication type:

Article

CAPRI: efficient inference of cancer progression models from cross-sectional data.

Published in:

Bioinformatics, 2015, v. 31, n. 18, p. 3016, doi. 10.1093/bioinformatics/btv296

By:

Ramazzotti, Daniele;
Caravagna, Giulio;
Loohuis, Loes Olde;
Graudenzi, Alex;
Korsunsky, Ilya;
Mauri, Giancarlo;
Antoniotti, Marco;
Mishra, Bud

Publication type:

Article

GeStoDifferent: a Cytoscape plugin for the generation and the identification of gene regulatory networks describing a stochastic cell differentiation process.

Published in:

Bioinformatics, 2013, v. 29, n. 4, p. 513, doi. 10.1093/bioinformatics/bts726

By:

Antoniotti, Marco;
Bader, Gary D.;
Caravagna, Giulio;
Crippa, Silvia;
Graudenzi, Alex;
Mauri, Giancarlo

Publication type:

Article

Elementary Active Membranes Have the Power of Counting.

Published in:

International Journal of Natural Computing Research, 2011, v. 2, n. 3, p. 35, doi. 10.4018/jncr.2011070104

By:

Porreca, Antonio E.;
Leporati, Alberto;
Mauri, Giancarlo;
Zandron, Claudio

Publication type:

Article

Automated Prostate Gland Segmentation Based on an Unsupervised Fuzzy C-Means Clustering Technique Using Multispectral T1w and T2w MR Imaging.

Published in:

Information (2078-2489), 2017, v. 8, n. 2, p. 49, doi. 10.3390/info8020049

By:

Rundo, Leonardo;
Militello, Carmelo;
Russo, Giorgio;
Garufi, Antonio;
Vitabile, Salvatore;
Gilardi, Maria Carla;
Mauri, Giancarlo

Publication type:

Article

A comparison of machine learning techniques for survival prediction in breast cancer.

Published in:

BioData Mining, 2011, v. 4, n. 1, p. 12, doi. 10.1186/1756-0381-4-12

By:

Vanneschi, Leonardo;
Farinaccio, Antonella;
Mauri, Giancarlo;
Antoniotti, Mauro;
Provero, Paolo;
Giacobini, Mario

Publication type:

Article

FiCoS: A fine-grained and coarse-grained GPU-powered deterministic simulator for biochemical networks.

Published in:

PLoS Computational Biology, 2021, v. 17, n. 9, p. 1, doi. 10.1371/journal.pcbi.1009410

By:

Tangherloni, Andrea;
Nobile, Marco S.;
Cazzaniga, Paolo;
Capitoli, Giulia;
Spolaor, Simone;
Rundo, Leonardo;
Mauri, Giancarlo;
Besozzi, Daniela

Publication type:

Article

An algorithm for finding signals of unknown length in DNA sequences.

Published in:

Bioinformatics, 2001, v. 17, p. 207, doi. 10.1093/bioinformatics/17.suppl_1.s207

By:

Pavesi, Giulio;
Mauri, Giancarlo;
Pesole, Graziano

Publication type:

Article

New Technologies for the Management and Rehabilitation of Chronic Diseases and Conditions.

Published in:

BioMed Research International, 2015, v. 2015, p. 1, doi. 10.1155/2015/180436

By:

Castelnuovo, Gianluca;
Mauri, Giancarlo;
Simpson, Susan;
Colantonio, Angela;
Goss, Stephen

Publication type:

Article

Massive Exploration of Perturbed Conditions of the Blood Coagulation Cascade through GPU Parallelization.

Published in:

BioMed Research International, 2014, v. 2014, p. 1, doi. 10.1155/2014/863298

By:

Cazzaniga, Paolo;
Mauri, Giancarlo;
Bellini, Matteo;
Besozzi, Daniela;
Nobile, Marco S.

Publication type:

Article

Recent complexity-theoretic results on P systems with active membranes.

Published in:

Journal of Logic & Computation, 2015, v. 25, n. 4, p. 1047, doi. 10.1093/logcom/exs077

By:

MAURI, GIANCARLO;
LEPORATI, ALBERTO;
PORRECA, ANTONIO E.;
ZANDRON, CLAUDIO

Publication type:

Article

Inferring Tree Causal Models of Cancer Progression with Probability Raising.

Published in:

PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0108358

By:

Loohuis, Loes Olde;
Caravagna, Giulio;
Graudenzi, Alex;
Ramazzotti, Daniele;
Mauri, Giancarlo;
Antoniotti, Marco;
Mishra, Bud

Publication type:

Article

Urinary Signatures of Renal Cell Carcinoma Investigated by Peptidomic Approaches.

Published in:

PLoS ONE, 2014, v. 9, n. 9, p. 1, doi. 10.1371/journal.pone.0106684

By:

Chinello, Clizia;
Cazzaniga, Marta;
De Sio, Gabriele;
Smith, Andrew James;
Gianazza, Erica;
Grasso, Angelica;
Rocco, Francesco;
Signorini, Stefano;
Grasso, Marco;
Bosari, Silvano;
Zoppis, Italo;
Dakna, Mohammed;
van der Burgt, Yuri E. M.;
Mauri, Giancarlo;
Magni, Fulvio

Publication type:

Article

Integration of mRNA Expression Profile, Copy Number Alterations, and microRNA Expression Levels in Breast Cancer to Improve Grade Definition.

Published in:

PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0097681

By:

Cava, Claudia;
Bertoli, Gloria;
Ripamonti, Marilena;
Mauri, Giancarlo;
Zoppis, Italo;
Rosa, Pasquale Anthony Della;
Gilardi, Maria Carla;
Castiglioni, Isabella

Publication type:

Article

cuTauLeaping: A GPU-Powered Tau-Leaping Stochastic Simulator for Massive Parallel Analyses of Biological Systems.

Published in:

PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0091963

By:

Nobile, Marco S.;
Cazzaniga, Paolo;
Besozzi, Daniela;
Pescini, Dario;
Mauri, Giancarlo

Publication type:

Article

The Interplay of Intrinsic and Extrinsic Bounded Noises in Biomolecular Networks.

Published in:

PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0051174

By:

Caravagna, Giulio;
Mauri, Giancarlo;
d'Onofrio, Alberto

Publication type:

Article

Integration of single-cell RNA-seq data into population models to characterize cancer metabolism.

Published in:

PLoS Computational Biology, 2019, v. 15, n. 2, p. 1, doi. 10.1371/journal.pcbi.1006733

By:

Damiani, Chiara;
Maspero, Davide;
Di Filippo, Marzia;
Colombo, Riccardo;
Pescini, Dario;
Graudenzi, Alex;
Westerhoff, Hans Victor;
Alberghina, Lilia;
Vanoni, Marco;
Mauri, Giancarlo

Publication type:

Article

UNCONVENTIONAL COMPUTATION AND NATURAL COMPUTATION 2013.

Published in:

International Journal of Foundations of Computer Science, 2014, v. 25, n. 4, p. 369, doi. 10.1142/S0129054114020018

By:

DENNUNZIO, ALBERTO;
MANZONI, LUCA;
MAURI, GIANCARLO;
PORRECA, ANTONIO E.

Publication type:

Article

P SYSTEMS WITH ACTIVE MEMBRANES WORKING IN POLYNOMIAL SPACE.

Published in:

International Journal of Foundations of Computer Science, 2011, v. 22, n. 1, p. 65, doi. 10.1142/S0129054111007836

By:

PORRECA, ANTONIO E.;
LEPORATI, ALBERTO;
MAURI, GIANCARLO;
ZANDRON, CLAUDIO;
Freund, Rudolf

Publication type:

Article

MODELING DIFFUSION IN A SIGNAL TRANSDUCTION PATHWAY:: THE USE OF VIRTUAL VOLUMES IN P SYSTEMS.

Published in:

International Journal of Foundations of Computer Science, 2011, v. 22, n. 1, p. 89, doi. 10.1142/S012905411100785X

By:

BESOZZI, DANIELA;
CAZZANIGA, PAOLO;
COCOLO, STEFANIA;
MAURI, GIANCARLO;
PESCINI, DARIO;
Pérez-Jiménez, Mario J.

Publication type:

Article

DYNAMICAL PROBABILISTIC P SYSTEMS.

Published in:

International Journal of Foundations of Computer Science, 2006, v. 17, n. 1, p. 183, doi. 10.1142/S0129054106003760

By:

Pescini, Dario;
Besozzi, Daniela;
Mauri, Giancarlo;
Zandron, Claudio

Publication type:

Article

Approximating the Maximum Isomorphic Agreement Subtree is Hard.

Published in:

International Journal of Foundations of Computer Science, 2000, v. 11, n. 4, p. 579, doi. 10.1142/S0129054100000363

By:

Bonizzoni, Paola;
Vedova, Gianluca Della;
Mauri, Giancarlo;
Jiang, Tao

Publication type:

Article

How interacting pathways are regulated by miRNAs in breast cancer subtypes.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 183, doi. 10.1186/s12859-016-1196-1

By:

Cava, Claudia;
Colaprico, Antonio;
Bertoli, Gloria;
Bontempi, Gianluca;
Mauri, Giancarlo;
Castiglioni, Isabella

Publication type:

Article

BITS 2015: the annual meeting of the Italian Society of Bioinformatics.

Published in:

2016

By:

Milanesi, Luciano;
Guffanti, Alessandro;
Mauri, Giancarlo;
Masseroli, Marco

Publication type:

Proceeding

CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-0914-z

By:

Paroni, Andrea;
Graudenzi, Alex;
Caravagna, Giulio;
Damiani, Chiara;
Mauri, Giancarlo;
Antoniotti, Marco

Publication type:

Article

Gene switching rate determines response to extrinsic perturbations in the self-activation transcriptional network motif.

Published in:

Scientific Reports, 2016, p. 26980, doi. 10.1038/srep26980

By:

de Franciscis, Sebastiano;
Caravagna, Giulio;
Mauri, Giancarlo;
d'Onofrio, Alberto

Publication type:

Article

Social media and mobile applications in chronic disease prevention and management.

Published in:

2015

By:

Santoro, Eugenio;
Castelnuovo, Gianluca;
Zoppis, Italo;
Mauri, Giancarlo;
Sicurello, Francesco

Publication type:

Opinion

Managing chronic pathologies with a stepped mHealth-based approach in clinical psychology and medicine.

Published in:

Frontiers in Psychology, 2015, v. 6, p. 1, doi. 10.3389/fpsyg.2015.00407

By:

Castelnuovo, Gianluca;
Zoppis, Italo;
Santoro, Eugenio;
Ceccarini, Martina;
Pietrabissa, Giada;
Manzoni, Gian Mauro;
Corti, Stefania;
Borrello, Maria;
Giusti, Emanuele Maria;
Cattivelli, Roberto;
Melesi, Anna;
Mauri, Giancarlo;
Molinari, Enrico;
Sicurello, Francesco

Publication type:

Article

Introducing a Space Complexity Measure for P Systems.

Published in:

International Journal of Computers, Communications & Control, 2009, v. 4, n. 3, p. 301, doi. 10.15837/ijccc.2009.3.2779

By:

Porreca, Antonio E.;
Leporati, Alberto;
Mauri, Giancarlo;
Zandron, Claudio

Publication type:

Article

Tumor size, stage and grade alterations of urinary peptidome in RCC.

Published in:

2015

By:

Clizia Chinello;
Marta Cazzaniga;
De Sio, Gabriele;
Smith, Andrew James;
Grasso, Angelica;
Rocco, Bernardo;
Signorini, Stefano;
Grasso, Marco;
Bosari, Silvano;
Zoppis, Italo;
Mauri, Giancarlo;
Magni, Fulvio;
Chinello, Clizia;
Cazzaniga, Marta

Publication type:

journal article

A CUDA-powered method for the feature extraction and unsupervised analysis of medical images.

Published in:

Journal of Supercomputing, 2021, v. 77, n. 8, p. 8514, doi. 10.1007/s11227-020-03565-8

By:

Rundo, Leonardo;
Tangherloni, Andrea;
Cazzaniga, Paolo;
Mistri, Matteo;
Galimberti, Simone;
Woitek, Ramona;
Sala, Evis;
Mauri, Giancarlo;
Nobile, Marco S.

Publication type:

Article

ginSODA: massive parallel integration of stiff ODE systems on GPUs.

Published in:

Journal of Supercomputing, 2019, v. 75, n. 12, p. 7844, doi. 10.1007/s11227-018-2549-5

By:

S. Nobile, Marco;
Cazzaniga, Paolo;
Besozzi, Daniela;
Mauri, Giancarlo

Publication type:

Article