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HAM-ART: An optimised culture-free Hi-C metagenomics pipeline for tracking antimicrobial resistance genes in complex microbial communities.
- Published in:
- PLoS Genetics, 2022, v. 18, n. 3, p. 1, doi. 10.1371/journal.pgen.1009776
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- Article
Large-scale genomic analysis of antimicrobial resistance in the zoonotic pathogen Streptococcus suis.
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- BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-021-01094-1
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- Article
Evaluation of the recombinant proteins RlpB and VacJ as a vaccine for protection against Glaesserella parasuis in pigs.
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- BMC Veterinary Research, 2020, v. 16, n. 1, p. 1, doi. 10.1186/s12917-020-02377-5
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- Article
Streptococcus suis contains multiple phase-variable methyltransferases that show a discrete lineage distribution.
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- Nucleic Acids Research, 2018, v. 46, n. 21, p. 11466, doi. 10.1093/nar/gky913
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- Article
Phylogenetic analyses and antimicrobial resistance profiles of Campylobacter spp. from diarrhoeal patients and chickens in Botswana.
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- PLoS ONE, 2018, v. 13, n. 3, p. 1, doi. 10.1371/journal.pone.0194481
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- Article
Transcriptome and proteome analysis of Salmonella enterica serovar Typhimurium systemic infection of wild type and immune-deficient mice.
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- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0181365
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- Article
Overexpression of antibiotic resistance genes in hospital effluents over time.
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- 2017
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- journal article
Defining the ABC of gene essentiality in streptococci.
- Published in:
- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3794-3
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- Article
Analysis of Campylobacter jejuni infection in the gnotobiotic piglet and genome-wide identification of bacterial factors required for infection.
- Published in:
- Scientific Reports, 2017, p. 44283, doi. 10.1038/srep44283
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- Article
Whole Genome Sequencing for Surveillance of Antimicrobial Resistance in Actinobacillus pleuropneumoniae.
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- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00311
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- Article
Genomic variations leading to alterations in cell morphology of Campylobacter spp.
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- Scientific Reports, 2016, p. 38303, doi. 10.1038/srep38303
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- Publication type:
- Article
ICEApl1, an Integrative Conjugative Element Related to ICEHin1056, Identified in the Pig Pathogen Actinobacillus pleuropneumoniae.
- Published in:
- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00810
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- Publication type:
- Article
The essential genome of Streptococcus agalactiae.
- Published in:
- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2741-z
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- Publication type:
- Article
Phylogenomic exploration of the relationships between strains of Mycobacterium avium subspecies paratuberculosis.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-015-2234-5
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- Publication type:
- Article
Whole genome investigation of a divergent clade of the pathogen Streptococcus suis.
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- Frontiers in Microbiology, 2015, v. 6, p. 1, doi. 10.3389/fmicb.2015.01191
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- Publication type:
- Article
Metatranscriptomics reveals metabolic adaptation and induction of virulence factors by Haemophilus parasuis during lung infection.
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- Veterinary Research, 2015, v. 46, n. 1, p. 1, doi. 10.1186/s13567-015-0225-9
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- Publication type:
- Article
Identification of dfrA14 in two distinct plasmids conferring trimethoprim resistance in Actinobacillus pleuropneumoniae.
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- Journal of Antimicrobial Chemotherapy (JAC), 2015, v. 70, n. 8, p. 2217, doi. 10.1093/jac/dkv121
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- Article
Capturing the cloud of diversity reveals complexity and heterogeneity of MRSA carriage, infection and transmission.
- Published in:
- Nature Communications, 2015, v. 6, n. 3, p. 6560, doi. 10.1038/ncomms7560
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- Article
The use of genome wide association methods to investigate pathogenicity, population structure and serovar in Haemophilus parasuis.
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- BMC Genomics, 2014, v. 15, n. 1, p. 3567, doi. 10.1186/1471-2164-15-1179
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- Article
The Generation of Successive Unmarked Mutations and Chromosomal Insertion of Heterologous Genes in Actinobacillus pleuropneumoniae Using Natural Transformation.
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- PLoS ONE, 2014, v. 9, n. 11, p. 1, doi. 10.1371/journal.pone.0111252
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- Publication type:
- Article
The Effects of Vaccination and Immunity on Bacterial Infection Dynamics In Vivo.
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- PLoS Pathogens, 2014, v. 10, n. 9, p. 1, doi. 10.1371/journal.ppat.1004359
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- Article
Comprehensive Assignment of Roles for Salmonella Typhimurium Genes in Intestinal Colonization of Food-Producing Animals.
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- PLoS Genetics, 2013, v. 9, n. 4, p. 1, doi. 10.1371/journal.pgen.1003456
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- Publication type:
- Article
Attenuated Salmonella Typhimurium Lacking the Pathogenicity Island-2 Type 3 Secretion System Grow to High Bacterial Numbers inside Phagocytes in Mice.
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- PLoS Pathogens, 2012, v. 8, n. 12, p. 1, doi. 10.1371/journal.ppat.1003070
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- Publication type:
- Article
Attenuated Salmonella Typhimurium Lacking the Pathogenicity Island-2 Type 3 Secretion System Grow to High Bacterial Numbers inside Phagocytes in Mice.
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- PLoS Pathogens, 2012, v. 8, n. 1, p. 1, doi. 10.1371/journal.ppat.1003070
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- Publication type:
- Article
Evidence for a lineage of virulent bacteriophages that target Campylobacter.
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- BMC Genomics, 2010, v. 11, p. 214, doi. 10.1186/1471-2164-11-214
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- Publication type:
- Article
An ex vivo swine tracheal organ culture for the study of influenza infection.
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- Influenza & Other Respiratory Viruses, 2010, v. 4, n. 1, p. 7, doi. 10.1111/j.1750-2659.2009.00119.x
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- Publication type:
- Article
Toll-like receptor 4 signalling through MyD88 is essential to control Salmonella enterica serovar Typhimurium infection, but not for the initiation of bacterial clearance.
- Published in:
- Immunology, 2009, v. 128, n. 4, p. 472, doi. 10.1111/j.1365-2567.2009.03146.x
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- Publication type:
- Article
A Strand-Specific RNA-Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi.
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- PLoS Genetics, 2009, v. 5, n. 7, p. 1, doi. 10.1371/journal.pgen.1000569
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- Publication type:
- Article
Comprehensive Identification of Salmonella enterica Serovar Typhimurium Genes Required for Infection of BALB/c Mice.
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- PLoS Pathogens, 2009, v. 5, n. 7, p. 1, doi. 10.1371/journal.ppat.1000529
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- Publication type:
- Article
Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation.
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- BMC Genomics, 2009, v. 10, p. 291, doi. 10.1186/1471-2164-10-291
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- Publication type:
- Article
Caspase-3-dependent phagocyte death during systemic Salmonella enterica serovar Typhimurium infection of mice.
- Published in:
- Immunology, 2008, v. 125, n. 1, p. 28, doi. 10.1111/j.1365-2567.2008.02814.x
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- Publication type:
- Article
Virulent Salmonella enterica infections can be exacerbated by concomitant infection of the host with a live attenuated S. enterica vaccine via Toll-like receptor 4-dependent interleukin-10 production with the involvement of both TRIF and MyD88.
- Published in:
- Immunology, 2008, v. 124, n. 4, p. 469, doi. 10.1111/j.1365-2567.2007.02798.x
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- Publication type:
- Article
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi.
- Published in:
- Nature Genetics, 2008, v. 40, n. 8, p. 987, doi. 10.1038/ng.195
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- Publication type:
- Article
Modelling within-Host Spatiotemporal Dynamics of Invasive Bacterial Disease.
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- PLoS Biology, 2008, v. 6, n. 4, p. e74, doi. 10.1371/journal.pbio.0060074
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- Publication type:
- Article
Salmonella-induced SipB-independent cell death requires Toll-like receptor-4 signalling via the adapter proteins Tram and Trif.
- Published in:
- Immunology, 2007, v. 122, n. 2, p. 222, doi. 10.1111/j.1365-2567.2007.02631.x
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- Publication type:
- Article
Intracellular Demography and the Dynamics of Salmonella enterica Infections.
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- PLoS Biology, 2006, v. 4, n. 11, p. 2091, doi. 10.1371/journal.pbio.0040349
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- Publication type:
- Article
Differential modulatory effects of Annexin 1 on nitric oxide synthase induction by lipopolysaccharide in macrophages.
- Published in:
- Immunology, 2006, v. 117, n. 3, p. 340, doi. 10.1111/j.1365-2567.2005.02307.x
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- Publication type:
- Article
Identification of host-specific colonization factors ofSalmonella entericaserovar Typhimurium.
- Published in:
- Molecular Microbiology, 2004, v. 54, n. 4, p. 994, doi. 10.1111/j.1365-2958.2004.04323.x
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- Publication type:
- Article
The Bordetellae: lessons from genomics.
- Published in:
- Nature Reviews Microbiology, 2004, v. 2, n. 5, p. 379, doi. 10.1038/nrmicro886
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- Publication type:
- Article
Bordetella bronchiseptica PagP is a Bvg-regulated lipid A palmitoyl transferase that is required for persistent colonization of the mouse respiratory tract.
- Published in:
- Molecular Microbiology, 2003, v. 48, n. 3, p. 725, doi. 10.1046/j.1365-2958.2003.03484.x
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- Publication type:
- Article
DNA Analysis of Pneumocystis Infecting a Cavalier King Charles Spaniel.
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- Journal of Eukaryotic Microbiology, 2001, v. 48, p. 106s, doi. 10.1111/j.1550-7408.2001.tb00471.x
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- Publication type:
- Article
A lethal role for lipid A in Salmonella infections.
- Published in:
- Molecular Microbiology, 1998, v. 29, n. 2, p. 571, doi. 10.1046/j.1365-2958.1998.00952.x
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- Publication type:
- Article
Molecular and functional analysis of the lipopolysaccharide biosynthesis locus wlb from...
- Published in:
- Molecular Microbiology, 1998, v. 29, n. 1, p. 27, doi. 10.1046/j.1365-2958.1998.00878.x
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- Publication type:
- Article
Cloning and Molecular Analysis of the galE Gene of Neisseria meningitidis and Its Role in Lipopolysaccharide Biosynthesis.
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- Annals of the New York Academy of Sciences, 1994, v. 730, n. 1, p. 252, doi. 10.1111/j.1749-6632.1994.tb44256.x
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- Publication type:
- Article
Analysis of the I69 Mutation of Haemophilus influenzae.
- Published in:
- Annals of the New York Academy of Sciences, 1994, v. 730, n. 1, p. 255, doi. 10.1111/j.1749-6632.1994.tb44257.x
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- Publication type:
- Article
Cloning and molecular analysis of the gaIE gene of Neisseria meningitidis and its role in lipopolysaccharide biosynthesis.
- Published in:
- Molecular Microbiology, 1993, v. 10, n. 2, p. 361, doi. 10.1111/j.1365-2958.1993.tb01962.x
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- Publication type:
- Article