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High Carriage Rates of Multidrug-Resistant Gram-Negative Bacteria in Neonatal Intensive Care Units From Ghana.
Published in:
Open Forum Infectious Diseases, 2020, v. 7, n. 4, p. N.PAG, doi. 10.1093/ofid/ofaa109
By:
- Labi, Appiah-Korang;
- Bjerrum, Stephanie;
- Enweronu-Laryea, Christabel C;
- Ayibor, Prosper K;
- Nielsen, Karen L;
- Marvig, Rasmus L;
- Newman, Mercy J;
- Andersen, Leif P;
- Kurtzhals, Jorgen A L
Publication type:
Article
Oxacillinase-181 Carbapenemase-Producing Klebsiella pneumoniae in Neonatal Intensive Care Unit, Ghana, 2017-2019.
Published in:
2020
By:
- Labi, Appiah-Korang;
- Nielsen, Karen L.;
- Marvig, Rasmus L.;
- Bjerrum, Stephanie;
- Enweronu-Laryea, Christabel;
- Bennedbæk, Marc;
- Newman, Mercy J.;
- Ayibor, Prosper K.;
- Andersen, Leif P.;
- Kurtzhals, Jørgen A. L.
Publication type:
journal article
Genome-wide-analyses of Listeria monocytogenes from food-processing plants reveal clonal diversity and date the emergence of persisting sequence types.
Published in:
Environmental Microbiology Reports, 2017, v. 9, n. 4, p. 428, doi. 10.1111/1758-2229.12552
By:
- Knudsen, Gitte M.;
- Nielsen, Jesper Boye;
- Marvig, Rasmus L.;
- Ng, Yin;
- Worning, Peder;
- Westh, Henrik;
- Gram, Lone
Publication type:
Article
Diversity of small RNAs expressed in P seudomonas species.
Published in:
Environmental Microbiology Reports, 2015, v. 7, n. 2, p. 227, doi. 10.1111/1758-2229.12233
By:
- Gómez-Lozano, María;
- Marvig, Rasmus L.;
- Molina-Santiago, Carlos;
- Tribelli, Paula M.;
- Ramos, Juan-Luis;
- Molin, Søren
Publication type:
Article
Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions.
Published in:
Virus Evolution, 2021, v. 7, n. 2, p. 1, doi. 10.1093/ve/veab055
By:
- Bennedbæk, Marc;
- Zhukova, Anna;
- Tang, Man-Hung Eric;
- Bennet, Jaclyn;
- Munderi, Paula;
- Ruxrungtham, Kiat;
- Gisslen, Magnus;
- Worobey, Michael;
- Lundgren, Jens D;
- Marvig, Rasmus L
Publication type:
Article
Added Value of Reanalysis of Whole Exome- and Whole Genome Sequencing Data From Patients Suspected of Primary Immune Deficiency Using an Extended Gene Panel and Structural Variation Calling.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.906328
By:
- Mørup, Sara Bohnstedt;
- Nazaryan-Petersen, Lusine;
- Gabrielaite, Migle;
- Reekie, Joanne;
- Marquart, Hanne V.;
- Hartling, Hans Jakob;
- Marvig, Rasmus L.;
- Katzenstein, Terese L.;
- Masmas, Tania N.;
- Lundgren, Jens;
- Murray, Daniel D.;
- Helleberg, Marie;
- Borgwardt, Line
Publication type:
Article
Added Value of Reanalysis of Whole Exome- and Whole Genome Sequencing Data From Patients Suspected of Primary Immune Deficiency Using an Extended Gene Panel and Structural Variation Calling.
Published in:
Frontiers in Immunology, 2022, v. 13, p. 1, doi. 10.3389/fimmu.2022.906328
By:
- Mørup, Sara Bohnstedt;
- Nazaryan-Petersen, Lusine;
- Gabrielaite, Migle;
- Reekie, Joanne;
- Marquart, Hanne V.;
- Hartling, Hans Jakob;
- Marvig, Rasmus L.;
- Katzenstein, Terese L.;
- Masmas, Tania N.;
- Lundgren, Jens;
- Murray, Daniel D.;
- Helleberg, Marie;
- Borgwardt, Line
Publication type:
Article
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark.
Published in:
Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-022-01045-7
By:
- Michaelsen, Thomas Y.;
- Bennedbæk, Marc;
- Christiansen, Lasse E.;
- Jørgensen, Mia S. F.;
- Møller, Camilla H.;
- Sørensen, Emil A.;
- Knutsson, Simon;
- Brandt, Jakob;
- Jensen, Thomas B. N.;
- Chiche-Lapierre, Clarisse;
- Collados, Emilio F.;
- Sørensen, Trine;
- Petersen, Celine;
- Le-Quy, Vang;
- Sereika, Mantas;
- Hansen, Frederik T.;
- Rasmussen, Morten;
- Fonager, Jannik;
- Karst, Søren M.;
- Marvig, Rasmus L.
Publication type:
Article
Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark.
Published in:
Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-022-01045-7
By:
- Michaelsen, Thomas Y.;
- Bennedbæk, Marc;
- Christiansen, Lasse E.;
- Jørgensen, Mia S. F.;
- Møller, Camilla H.;
- Sørensen, Emil A.;
- Knutsson, Simon;
- Brandt, Jakob;
- Jensen, Thomas B. N.;
- Chiche-Lapierre, Clarisse;
- Collados, Emilio F.;
- Sørensen, Trine;
- Petersen, Celine;
- Le-Quy, Vang;
- Sereika, Mantas;
- Hansen, Frederik T.;
- Rasmussen, Morten;
- Fonager, Jannik;
- Karst, Søren M.;
- Marvig, Rasmus L.
Publication type:
Article
Bacterial evolution in PCD and CF patients follows the same mutational steps.
Published in:
Scientific Reports, 2016, p. 28732, doi. 10.1038/srep28732
By:
- Sommer, Lea M.;
- Alanin, Mikkel Christian;
- Marvig, Rasmus L.;
- Nielsen, Kim Gjerum;
- Høiby, Niels;
- von Buchwald, Christian;
- Molin, Søren;
- Johansen, Helle Krogh
Publication type:
Article
In vitro Relative Fitness, in vivo Intestinal Colonization and Genomic Differences of Escherichia coli of ST131 Carrying bla <sub>CTX–M–15</sub>.
Published in:
Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2021.798473
By:
- Hertz, Frederik Boëtius;
- Marvig, Rasmus L.;
- Frimodt-Møller, Niels;
- Nielsen, Karen Leth
Publication type:
Article
Is genotyping of single isolates sufficient for population structure analysis of Pseudomonas aeruginosa in cystic fibrosis airways?
Published in:
BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2873-1
By:
- Sommer, Lea M.;
- Marvig, Rasmus L.;
- Luján, Adela;
- Koza, Anna;
- Pressler, Tacjana;
- Molin, Søren;
- Johansen, Helle K.
Publication type:
Article
Nationwide germline whole genome sequencing of 198 consecutive pediatric cancer patients reveals a high frequency of cancer prone syndromes.
Published in:
PLoS Genetics, 2020, v. 16, n. 12, p. 1, doi. 10.1371/journal.pgen.1009231
By:
- Byrjalsen, Anna;
- Hansen, Thomas V. O.;
- Stoltze, Ulrik K.;
- Mehrjouy, Mana M.;
- Barnkob, Nanna Moeller;
- Hjalgrim, Lisa L.;
- Mathiasen, René;
- Lautrup, Charlotte K.;
- Gregersen, Pernille A.;
- Hasle, Henrik;
- Wehner, Peder S.;
- Tuckuviene, Ruta;
- Sackett, Peter Wad;
- Laspiur, Adrian O.;
- Rossing, Maria;
- Marvig, Rasmus L.;
- Tommerup, Niels;
- Olsen, Tina Elisabeth;
- Scheie, David;
- Gupta, Ramneek
Publication type:
Article
A Comparison of Tools for Copy-Number Variation Detection in Germline Whole Exome and Whole Genome Sequencing Data.
Published in:
Cancers, 2021, v. 13, n. 24, p. 6283, doi. 10.3390/cancers13246283
By:
- Gabrielaite, Migle;
- Torp, Mathias Husted;
- Rasmussen, Malthe Sebro;
- Andreu-Sánchez, Sergio;
- Vieira, Filipe Garrett;
- Pedersen, Christina Bligaard;
- Kinalis, Savvas;
- Madsen, Majbritt Busk;
- Kodama, Miyako;
- Demircan, Gül Sude;
- Simonyan, Arman;
- Yde, Christina Westmose;
- Olsen, Lars Rønn;
- Marvig, Rasmus L.;
- Østrup, Olga;
- Rossing, Maria;
- Nielsen, Finn Cilius;
- Winther, Ole;
- Bagger, Frederik Otzen
Publication type:
Article
Long-term evolution of antibiotic tolerance in Pseudomonas aeruginosa lung infections.
Published in:
Evolution Letters, 2023, v. 7, n. 6, p. 389, doi. 10.1093/evlett/qrad034
By:
- Ghoul, Melanie;
- Andersen, Sandra B;
- Marvig, Rasmus L;
- Johansen, Helle K;
- Jelsbak, Lars;
- Molin, Søren;
- Perron, Gabriel;
- Griffin, Ashleigh S
Publication type:
Article
Microbiome Compositions and Resistome Levels after Antibiotic Treatment of Critically Ill Patients: An Observational Cohort Study.
Published in:
Microorganisms, 2021, v. 9, n. 12, p. 2542, doi. 10.3390/microorganisms9122542
By:
- Nielsen, Karen Leth;
- Olsen, Markus Harboe;
- Pallejá, Albert;
- Ebdrup, Søren Røddik;
- Sørensen, Nikolaj;
- Lukjancenko, Oksana;
- Marvig, Rasmus L.;
- Møller, Kirsten;
- Frimodt-Møller, Niels;
- Hertz, Frederik Boëtius
Publication type:
Article
Impact of specific high‐risk human papillomavirus genotypes on survival in oropharyngeal cancer.
Published in:
International Journal of Cancer, 2022, v. 150, n. 7, p. 1174, doi. 10.1002/ijc.33893
By:
- Garset‐Zamani, Martin;
- Carlander, Amanda F.;
- Jakobsen, Kathrine K.;
- Friborg, Jeppe;
- Kiss, Katalin;
- Marvig, Rasmus L.;
- Olsen, Caroline;
- Nielsen, Finn C.;
- Andersen, Elo;
- Grønhøj, Christian;
- von Buchwald, Christian
Publication type:
Article
GenAPI: a tool for gene absence-presence identification in fragmented bacterial genome sequences.
Published in:
BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-03657-5
By:
- Gabrielaite, Migle;
- Marvig, Rasmus L.
Publication type:
Article
Case Report: Hyper IgM Syndrome Identified by Whole Genome Sequencing in a Young Syrian Man Presenting With Atypical, Severe and Recurrent Mucosal Leishmaniasis.
Published in:
Frontiers in Immunology, 2020, v. 11, p. N.PAG, doi. 10.3389/fimmu.2020.567856
By:
- Drabe, Camilla Heldbjerg;
- Marvig, Rasmus L.;
- Borgwardt, Line;
- Lundgren, Jens D.;
- Maquart, Hanne Vibeke Hansen;
- Katzenstein, Terese Lea;
- Helleberg, Marie
Publication type:
Article
The evolution of antimicrobial peptide resistance in Pseudomonas aeruginosa is shaped by strong epistatic interactions.
Published in:
Nature Communications, 2016, v. 7, n. 10, p. 13002, doi. 10.1038/ncomms13002
By:
- Jochumsen, Nicholas;
- Marvig, Rasmus L.;
- Damkiær, Søren;
- Jensen, Rune Lyngklip;
- Paulander, Wilhelm;
- Molin, Søren;
- Jelsbak, Lars;
- Folkesson, Anders
Publication type:
Article
Filamentous bacteriophages are associated with chronic Pseudomonas lung infections and antibiotic resistance in cystic fibrosis.
Published in:
Science Translational Medicine, 2019, v. 11, n. 488, p. N.PAG, doi. 10.1126/scitranslmed.aau9748
By:
- Burgener, Elizabeth B.;
- Sweere, Johanna M.;
- Bach, Michelle S.;
- Secor, Patrick R.;
- Haddock, Naomi;
- Jennings, Laura K.;
- Marvig, Rasmus L.;
- Johansen, Helle Krogh;
- Rossi, Elio;
- Cao, Xiou;
- Tian, Lu;
- Nedelec, Laurence;
- Molin, Søren;
- Bollyky, Paul L.;
- Milla, Carlos E.
Publication type:
Article
The Incidence, Survival, and HPV Impact of Second Primary Cancer following Primary Oropharyngeal Squamous Cell Carcinoma: A 20-Year Retrospective and Population-Based Study.
Published in:
Viruses (1999-4915), 2023, v. 15, n. 1, p. 34, doi. 10.3390/v15010034
By:
- Andersen, Lasse;
- Jakobsen, Kathrine Kronberg;
- Carlander, Amanda-Louise Fenger;
- Garset-Zamani, Martin;
- Friborg, Jeppe;
- Kiss, Katalin;
- Marvig, Rasmus L.;
- Olsen, Caroline;
- Nielsen, Finn Cilius;
- Andersen, Elo;
- Grønhøj, Christian;
- Buchwald, Christian von
Publication type:
Article
Fatal JC-virus Granular Cerebellar Neuronopathy in a Patient Diagnosed with ALPS and Hypogammaglobulinemia.
Published in:
2022
By:
- Helweg-Larsen, Jannik;
- Rasmussen, Morten;
- Marquart, Hanne Vibeke;
- Kondziella, Daniel;
- Marvig, Rasmus L.;
- Rosenstierne, Maiken Worsøe;
- Bay, Jakob Thaning;
- Ryder, Lars Peter;
- Gjerdrum, Lise Mette Rahbek;
- Bangsgaard, Regitze;
- Gideon, Peter;
- Sellebjerg, Finn Thorup;
- Fomsgaard, Anders
Publication type:
Letter
Rate of response to initial antiretroviral therapy according to level of pre‐existing HIV‐1 drug resistance detected by next‐generation sequencing in the strategic timing of antiretroviral treatment (START) study.
Published in:
HIV Medicine, 2024, v. 25, n. 2, p. 212, doi. 10.1111/hiv.13556
By:
- Cozzi‐Lepri, Alessandro;
- Dunn, David;
- Tostevin, Anna;
- Marvig, Rasmus L.;
- Bennedbæk, Marc;
- Sharma, Shweta;
- Kozal, Michael J.;
- Gompels, Mark;
- Pinto, Angie N.;
- Lundgren, Jens;
- Baxter, John D.
Publication type:
Article
Deep-sequencing of viral genomes from a large and diverse cohort of treatment-naive HIV-infected persons shows associations between intrahost genetic diversity and viral load.
Published in:
PLoS Computational Biology, 2023, v. 19, n. 1, p. 1, doi. 10.1371/journal.pcbi.1010756
By:
- Gabrielaite, Migle;
- Bennedbæk, Marc;
- Rasmussen, Malthe Sebro;
- Kan, Virginia;
- Furrer, Hansjakob;
- Flisiak, Robert;
- Losso, Marcelo;
- Lundgren, Jens D.;
- Marvig, Rasmus L.
Publication type:
Article
Combining epigenetic therapy with venetoclax overcomes alemtuzumab resistance in T-cell prolymphocytic leukemia. A case report of a 26-year-old man with a prior history of T-cell acute lymphoblastic leukemia and GI-T lymphoma.
Published in:
2020
By:
- Andersen, Michael Asger;
- Valentin, Rebecca;
- Dissing Sjö, Lene;
- Borgwardt, Line;
- Schmiegelow, Kjeld;
- Andersen, Mette Klarskov;
- Marvig, Rasmus L.;
- Yde, Christina Westmose;
- Niemann, Carsten Utoft
Publication type:
Case Study
Adrenal suppression in patients with chronic obstructive pulmonary disease treated with glucocorticoids: Role of specific glucocorticoid receptor polymorphisms.
Published in:
PLoS ONE, 2022, v. 17, n. 2, p. 1, doi. 10.1371/journal.pone.0262898
By:
- Sivapalan, Pradeesh;
- Borresen, Stina Willemoes;
- Eklöf, Josefin;
- Klose, Marianne;
- Holm, Freja S.;
- Feldt-Rasmussen, Ulla;
- Rossing, Maria;
- Jørgensen, Niklas R.;
- Marvig, Rasmus L.;
- Saeed, Mohamad Isam;
- Wilcke, Torgny;
- Seersholm, Niels;
- Mathioudakis, Alexander G.;
- Vestbo, Jørgen;
- Jensen, Jens-Ulrik Stæhr
Publication type:
Article
Coexistence and Within-Host Evolution of Diversified Lineages of Hypermutable Pseudomonas aeruginosa in Long-term Cystic Fibrosis Infections.
Published in:
PLoS Genetics, 2014, v. 10, n. 10, p. 1, doi. 10.1371/journal.pgen.1004651
By:
- Feliziani, Sofía;
- Marvig, Rasmus L.;
- Luján, Adela M.;
- Moyano, Alejandro J.;
- Di Rienzo, Julio A.;
- Krogh Johansen, Helle;
- Molin, Søren;
- Smania, Andrea M.
Publication type:
Article
Human Immunotypes Impose Selection on Viral Genotypes Through Viral Epitope Specificity.
Published in:
2021
By:
- Gabrielaite, Migle;
- Bennedbæk, Marc;
- Zucco, Adrian G;
- Ekenberg, Christina;
- Murray, Daniel D;
- Kan, Virginia L;
- Touloumi, Giota;
- Vandekerckhove, Linos;
- Turner, Dan;
- Neaton, James;
- Lane, H Clifford;
- Safo, Sandra;
- Arenas-Pinto, Alejandro;
- Polizzotto, Mark N;
- Günthard, Huldrych F;
- Lundgren, Jens D;
- Marvig, Rasmus L
Publication type:
journal article
Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa.
Published in:
BMC Genomics, 2014, v. 15, n. 1, p. 783, doi. 10.1186/1471-2164-15-783
By:
- Gómez-Lozano, María;
- Marvig, Rasmus L.;
- Tulstrup, Monica V. L.;
- Molin, Søren
Publication type:
Article
Natural transformation of Vibrio cholerae as a tool - Optimizing the procedure.
Published in:
BMC Microbiology, 2010, v. 10, p. 155, doi. 10.1186/1471-2180-10-155
By:
- Marvig, Rasmus L.;
- Blokesch, Melanie
Publication type:
Article

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