Works by Marino, Leonardo

Results: 78

Subclinical Mastitis Related to Streptococcus canis Infection in Dairy Cattle.

Published in:

Veterinary Sciences, 2025, v. 12, n. 3, p. 286, doi. 10.3390/vetsci12030286

By:

Sposato, Alessio;
Del Sambro, Laura;
Castellana, Stefano;
Catalano, Elisabetta;
Galgano, Michela;
Castellana, Antonella;
Caffò, Annamaria;
Manzulli, Viviana;
Caruso, Marta;
Marino, Leonardo;
Milano, Angelica;
Addante, Luciana

Publication type:

Article

Many sequence-specific chromatin modifying protein-binding motifs show strong positional preferences for potential regulatory regions in the Saccharomyces cerevisiae genome.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 6, p. 1772, doi. 10.1093/nar/gkp1195

By:

Hansen, Loren;
Mariño-Ramírez, Leonardo;
Landsman, David

Publication type:

Article

The biological function of some human transcription factor binding motifs varies with position relative to the transcription start site.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 8, p. 2777, doi. 10.1093/nar/gkn137

By:

Tharakaraman, Kannan;
Bodenreider, Olivier;
Landsman, David;
Spouge, John L.;
Mariño-Ramírez, Leonardo

Publication type:

Article

Statistical analysis of over-represented words in human promoter sequences.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 19, p. 5972, doi. 10.1093/nar/gkh938

By:

Mariño-Ramírez, Leonardo;
Spuge, John L.;
Kanga, Gavin C.;
Landsman, David

Publication type:

Article

Statistical analysis of over‐represented words in human promoter sequences.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 3, p. 949

By:

Mariño‐Ramírez, Leonardo;
Spouge, John L.;
Kanga, Gavin C.;
Landsman, David

Publication type:

Article

FLORISTIC SIMILARITY IN A FOREST-SAVANNAH ECOTONE IN WESTERN BAHIA STATE, BRAZIL.

Published in:

Floresta, 2022, v. 52, n. 4, p. 475, doi. 10.5380/rf.v52i4.80286

By:

De Marino Treml, Leonardo;
Cattarin, Anadia;
Marques, Renato;
Galvão, Franklin;
Batista Crivellari, Lucas;
Morais Coutinho, Vinicius

Publication type:

Article

A simple, rapid and novel method based on salting-out assisted liquid-liquid extraction for ochratoxin A determination in beer samples prior to ultra-high-performance liquid chromatography coupled to tandem mass spectrometry.

Published in:

Food Additives & Contaminants. Part A: Chemistry, Analysis, Control, Exposure & Risk Assessment, 2018, v. 35, n. 8, p. 1622, doi. 10.1080/19440049.2018.1486045

By:

Mariño-Repizo, Leonardo;
Goicoechea, Hector;
Raba, Julio;
Cerutti, Soledad

Publication type:

Article

In silico identification and characterization of the ion transport specificity for P-type ATPases in the Mycobacterium tuberculosis complex.

Published in:

BMC Structural Biology, 2012, v. 12, n. 1, p. 1, doi. 10.1186/1472-6807-12-25

By:

Novoa-Aponte, Lorena;
León-Torres, Andrés;
Patiño-Ruiz, Miyer;
Cuesta-Bernal, Jenifer;
Salazar, Luz-Mary;
Landsman, David;
Mariño-Ramírez, Leonardo;
Soto, Carlos-Yesid

Publication type:

Article

Comorbidities and ethnic health disparities in the UK biobank.

Published in:

JAMIA Open, 2022, v. 5, n. 3, p. 1, doi. 10.1093/jamiaopen/ooac057

By:

Teagle, Whitney L.;
Norris, Emily T.;
Rishishwar, Lavanya;
Nagar, Shashwat Deepali;
Jordan, I. King;
Mariño-Ramírez, Leonardo

Publication type:

Article

Mammalian-wide interspersed repeat (MIR)-derived enhancers and the regulation of human gene expression.

Published in:

Mobile DNA, 2014, v. 5, n. 1, p. 1, doi. 10.1186/1759-8753-5-14

By:

Jjingo, Daudi;
Conley, Andrew B.;
Jianrong Wang;
Mariño-Ramírez, Leonardo;
Lunyak, Victoria V.;
Jordan, I. King

Publication type:

Article

Epigenetic histone modifications of human transposable elements: genome defense versus exaptation.

Published in:

Mobile DNA, 2010, v. 1, n. 1, p. 1, doi. 10.1186/1759-8753-1-2

By:

Huda, Ahsan;
Mariño-Ramírez, Leonardo;
Jordan, I. King

Publication type:

Article

Effect of the Transposable Element Environment of Human Genes on Gene Length and Expression.

Published in:

Genome Biology & Evolution, 2011, v. 2011, n. 15, p. 259

By:

Jjingo, Daudi;
Huda, Ahsan;
Gundapuneni, Madhumati;
Mariño-Ramírez, Leonardo;
Jordan, I. King

Publication type:

Article

Histone structure and nucleosome stability.

Published in:

Expert Review of Proteomics, 2005, v. 2, n. 5, p. 719, doi. 10.1586/14789450.2.5.719

By:

Mariño-Ramírez, Leonardo;
Kann, Maricel G.;
Shoemaker, Benjamin A.;
Landsman, David

Publication type:

Article

Multiple Evolutionary Solutions to Core Histone Gene Regulation.

Published in:

FASEB Journal, 2007, v. 21, n. 6, p. A1033, doi. 10.1096/fasebj.21.6.a1033-a

By:

Marino-Ramirez, Leonardo;
Jordan, I. King;
Landsman, David

Publication type:

Article

GENÓMICA EN COLOMBIA: ANCESTRALIDAD Y APLICACIONES EN SALUD PÚBLICA.

Published in:

Duazary. Revista de la Facultad de Ciencias de la Salud, 2019, v. 16, p. 73

By:

Valderrama-Aguirre, Augusto;
Rishishwar, Lavanya;
Chande, Aroon T.;
Conley, Andrew C.;
Norris, Emily T.;
Rowell, Jessica;
Nagar, Shashwat D.;
Gallo, Juan Esteban;
Mariño-Ramírez, Leonardo;
Medina-Rivas, Miguel A.;
Jordan, I. King

Publication type:

Article

CHOCOGEN: ANCESTRÍA GENÉTICA Y SALUD EN EL PACÍFICO COLOMBIANO.

Published in:

Duazary. Revista de la Facultad de Ciencias de la Salud, 2019, v. 16, p. 47

By:

Conley, Andrew C.;
Rishishwar, Lavanya;
Nagar, Shashwat D.;
Norris, Emily T.;
Robledo-Moreno, A. Melissa;
Vélez, Sara;
Montes-Rodriguez, Camila;
Torres, Isaura;
Esteban Gallo, Juan;
Mariño-Ramírez, Leonardo;
Valderrama-Aguirre, Augusto;
Medina-Rivas, Miguel A.;
Jordan, I. King

Publication type:

Article

"Burrata di Andria" PGI Cheese: Physicochemical and Microbiological Features.

Published in:

Foods, 2020, v. 9, n. 11, p. 1694, doi. 10.3390/foods9111694

By:

Di Cerbo, Alessandro;
Miraglia, Dino;
Marino, Leonardo;
Stocchi, Roberta;
Loschi, Anna Rita;
Fisichella, Stefano;
Cammertoni, Natalina;
Menchetti, Laura;
Farneti, Silvana;
Ranucci, David;
Branciari, Raffaella;
Rea, Stefano

Publication type:

Article

Sliding Motility, Biofilm Formation, and Glycopeptidolipid Production in Mycobacterium colombiense Strains.

Published in:

BioMed Research International, 2015, v. 2015, p. 1, doi. 10.1155/2015/419549

By:

Maya-Hoyos, Milena;
Leguizamón, John;
Mariño-Ramírez, Leonardo;
Soto, Carlos Y.

Publication type:

Article

Oxidative Stress Biomarkers in Erythrocytes of Captive Pre-Juvenile Loggerhead Turtles Following Acute Exposure to Methylmercury.

Published in:

Applied Sciences (2076-3417), 2020, v. 10, n. 10, p. 3602, doi. 10.3390/app10103602

By:

Hernández-Fernández, Javier;
López-Barrera, Ellie Anne;
Mariño-Ramírez, Leonardo;
Rodríguez-Becerra, Pilar;
Pinzón-Velasco, Andrés

Publication type:

Article

Ground Anthrax Bacillus Refined Isolation (GABRI) method for analyzing environmental samples with low levels of Bacillus anthracis contamination.

Published in:

BMC Microbiology, 2013, v. 13, n. 1, p. 1, doi. 10.1186/1471-2180-13-167

By:

Fasanella, Antonio;
Taranto, Pietro Di;
Garofolo, Giuliano;
Colao, Valeriana;
Marino, Leonardo;
Buonavoglia, Domenico;
Pedarra, Carmine;
Adone, Rosanna;
Hugh-Jones, Martin

Publication type:

Article

Genetic ancestry, admixture and health determinants in Latin America.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5195-7

By:

Wang, Lu;
Norris, Emily T.;
Rishishwar, Lavanya;
Jordan, I. King;
Mariño-Ramírez, Leonardo;
Valderrama-Aguirre, Augusto;
Conley, Andrew B.

Publication type:

Article

Detection of high heteroplasmy in complete loggerhead and hawksbill sea turtles mitochondrial genomes using RNAseq.

Published in:

Mitochondrial DNA. Part A, 2021, v. 32, n. 3, p. 106, doi. 10.1080/24701394.2021.1885389

By:

Delgado-Cano, David;
Mariño-Ramírez, Leonardo;
Hernández-Fernández, Javier

Publication type:

Article

Complete mitochondrial genome of the nesting Colombian Caribbean Hawksbill Turtle.

Published in:

Mitochondrial DNA: Resources, 2017, v. 2, n. 1, p. 128, doi. 10.1080/23802359.2017.1292477

By:

Hernández-Fernández, Javier;
Beltrán-Torres, Gerson;
Mariño-Ramírez, Leonardo

Publication type:

Article

Origin and Evolution of Human microRNAs From Transposable Elements.

Published in:

Genetics, 2007, v. 176, n. 2, p. 1323, doi. 10.1534/genetics.107.072553

By:

Piriyapongsa, Jittima;
Mariño-Ramírez, Leonardo;
Jordan, I. King

Publication type:

Article

Assessment of ochratoxin A occurrence in Argentine red wines using a novel sensitive quechers-solid phase extraction approach prior to ultra high performance liquid chromatography-tandem mass spectrometry methodology.

Published in:

Journal of the Science of Food & Agriculture, 2017, v. 97, n. 8, p. 2487, doi. 10.1002/jsfa.8065

By:

Mariño‐Repizo, Leonardo;
Gargantini, Raquel;
Manzano, Humberto;
Raba, Julio;
Cerutti, Soledad

Publication type:

Article

CÓDIGO-Colombia: una herramienta para la salud pública de precisión en Colombia.

Published in:

Biomédica: Revista del Instituto Nacional de Salud, 2023, v. 43, p. 147

By:

Valderrama-Aguirre, Augusto;
Esteban Gallo, Juan;
Jordan, King;
Mariño-Ramírez, Leonardo

Publication type:

Article

1A - “One health” una aproximación a los determinantes de la salud desde la transectorialidad.

Published in:

Biomédica: Revista del Instituto Nacional de Salud, 2023, v. 43, p. 147

By:

Valderrama-Aguirre, Augusto;
Esteban Gallo, Juan;
Jordan, King;
Mariño-Ramírez, Leonardo

Publication type:

Article

Genómica y salud pública: riesgo genómico Vs. prevalencia de diabetes en dos poblaciones colombianas de Chocó y Antioquia.

Published in:

Biomédica: Revista del Instituto Nacional de Salud, 2017, v. 37, p. 202

By:

Valderrama-Aguirre, Augusto;
Chande, Aroon;
Rishishwar, Lavanya;
Conley, Andrew;
Norris, Emily;
Marino-Ramirez, Leonardo;
Medina-Rivas, Miguel;
Jordan, Irving King

Publication type:

Article

Control de un ball & beam con Matlab® y Lego® NXT.

Published in:

Visión Electrónica, 2014, v. 8, n. 2, p. 39

By:

Mariño Lizarazo, Daniel Leonardo;
Tumialán Borja, José Antonio

Publication type:

Article

Alignments anchored on genomic landmarks can aid in the identification of regulatory elements.

Published in:

Bioinformatics, 2005, v. 21, p. i440, doi. 10.1093/bioinformatics/bti1028

By:

Tharakaraman, Kannan;
Mariño-Ramírez, Leonardo;
Sheetlin, Sergey;
Landsman, David;
Spouge, John L.

Publication type:

Article

Alignments anchored on genomic landmarks can aid in the identification of regulatory elements.

Published in:

Bioinformatics, 2005, v. 21, n. 1, p. i440, doi. 10.1093/bioinformatics/bti1028

By:

Kannan Tharakaraman;
Leonardo Mariño-Ramírez

Publication type:

Article

Pathogen Prevalence in Cetaceans Stranded along the Italian Coastline between 2015 and 2020.

Published in:

Pathogens, 2024, v. 13, n. 9, p. 762, doi. 10.3390/pathogens13090762

By:

Grattarola, Carla;
Pietroluongo, Guido;
Belluscio, Donatella;
Berio, Enrica;
Canonico, Cristina;
Centelleghe, Cinzia;
Cocumelli, Cristiano;
Crotti, Silvia;
Denurra, Daniele;
Di Donato, Alessandra;
Di Francesco, Gabriella;
Di Guardo, Giovanni;
Di Nocera, Fabio;
Di Renzo, Ludovica;
Gavaudan, Stefano;
Giorda, Federica;
Lucifora, Giuseppe;
Marino, Leonardo;
Marcer, Federica;
Marsili, Letizia

Publication type:

Article

Differences in chemical, physical and microbiological characteristics of Italian burrata cheeses made in artisanal and industrial plants of Apulia Region.

Published in:

Italian Journal of Food Safety, 2016, v. 5, n. 3, p. 146, doi. 10.4081/ijfs.2016.5879

By:

Rea, Stefano;
Marino, Leonardo;
Stocchi, Roberta;
Branciari, Raffaella;
Loschi, Anna Rita;
Miraglia, Dino;
Ranucci, David

Publication type:

Article

A Comparative Analysis of Genetic Ancestry and Admixture in the Colombian Populations of Chocó and Medellín.

Published in:

G3: Genes | Genomes | Genetics, 2017, v. 7, n. 10, p. 3435, doi. 10.1534/g3.117.1118

By:

Conley, Andrew B.;
Rishishwar, Lavanya;
Norris, Emily T.;
Valderrama-Aguirre, Augusto;
Mariño-Ramírez, Leonardo;
Medina-Rivas, Miguel A.;
Jordan, I. King

Publication type:

Article

Isolation and mapping of self-assembling protein domains encoded by the Saccharomyces cerevisiae genome using λ repressor fusions.

Published in:

Yeast, 2002, v. 19, n. 7, p. 641, doi. 10.1002/yea.867

By:

Mariño-Ramírez, Leonardo;
Hu, James C.

Publication type:

Article

Banana (Musa acuminata) transcriptome profiling in response to rhizobacteria: Bacillus amyloliquefaciens Bs006 and Pseudomonas fluorescens Ps006.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-5763-5

By:

Gamez, Rocío M.;
Rodríguez, Fernando;
Vidal, Newton Medeiros;
Ramirez, Sandra;
Vera Alvarez, Roberto;
Landsman, David;
Mariño-Ramírez, Leonardo

Publication type:

Article

Finding sequence motifs with Bayesian models incorporating positional information: an application to transcription factor binding sites.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-262

By:

Nak-Kyeong Kim;
Tharakaraman, Kannan;
Mariño-Ramírez, Leonardo;
Spouge, John L.

Publication type:

Article

Widespread Positive Selection in Synonymous Sites of Mammalian Genes.

Published in:

Molecular Biology & Evolution, 2007, v. 24, n. 8, p. 1821, doi. 10.1093/molbev/msm100

By:

Resch, Alissa M.;
Carmel, Liran;
Marino-Ramirez, Leonardo;
Ogurtsov, Aleksey Y.;
Shabalina, Svetlana A.;
Rogozin, Igor B.;
Koonin, Eugene V.

Publication type:

Article

Conservation and Coevolution in the Scale-Free Human Gene Coexpression Network.

Published in:

Molecular Biology & Evolution, 2004, v. 21, n. 11, p. 2058, doi. 10.1093/molbev/msh222

By:

Jordan, I. King;
Mariño-Ramírez, Leonardo;
Wolf, Yuri I.;
Koonin, Eugene V.

Publication type:

Article

TPMCalculator: one-step software to quantify mRNA abundance of genomic features.

Published in:

Bioinformatics, 2019, v. 35, n. 11, p. 1960, doi. 10.1093/bioinformatics/bty896

By:

Alvarez, Roberto Vera;
Pongor, Lorinc Sandor;
Mariño-Ramírez, Leonardo;
Landsman, David

Publication type:

Article

Human population-specific gene expression and transcriptional network modification with polymorphic transposable elements.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 5, p. 2318, doi. 10.1093/nar/gkw1286

By:

Lu Wang;
Rishishwar, Lavanya;
Mariño-Ramíırez, Leonardo;
Jordan, I. King

Publication type:

Article

Landscape of racial and ethnic health disparities in the All of Us Research Program.

Published in:

Database: The Journal of Biological Databases & Curation, 2024, v. 2024, p. 1, doi. 10.1093/database/baae082

By:

Lam, Vincent;
Sharma, Shivam;
Spouge, John L;
Jordan, I. King;
Mariño-Ramírez, Leonardo

Publication type:

Article

Workflow and web application for annotating NCBI BioProject transcriptome data.

Published in:

Database: The Journal of Biological Databases & Curation, 2017, v. 2017, n. 1, p. 1, doi. 10.1093/database/bax008

By:

Alvarez, Roberto Vera;
Vidal, Newton Medeiros;
Garzón-Martínez, Gina A.;
Barrero, Luz S.;
Landsman, David;
Mariño-Ramírez, Leonardo

Publication type:

Article

HistoneDB 2.0: a histone database with variants-an integrated resource to explore histones and their variants.

Published in:

Database: The Journal of Biological Databases & Curation, 2016, v. 2016, p. 1, doi. 10.1093/database/baw014

By:

Draizen, Eli J.;
Shaytan, Alexey K.;
Mariño-Ramírez, Leonardo;
Talbert, Paul B.;
Landsman, David;
Panchenko, Anna R.

Publication type:

Article

The Histone Database: an integrated resource for histones and histone fold-containing proteins.

Published in:

Database: The Journal of Biological Databases & Curation, 2011, v. 2011, p. 1, doi. 10.1093/database/bar048

By:

Mariño-Ramírez, Leonardo;
Levine, Kevin M.;
Morales, Mario;
Suiyuan Zhang;
Moreland, R. Travis;
Baxevanis, Andreas D.;
Landsman, David

Publication type:

Article

Transcriptome annotation in the cloud: complexity, best practices, and cost.

Published in:

GigaScience, 2021, v. 10, n. 2, p. 1, doi. 10.1093/gigascience/giaa163

By:

Alvarez, Roberto Vera;
Mariño-Ramírez, Leonardo;
Landsman, David

Publication type:

Article

PM4NGS, a project management framework for next-generation sequencing data analysis.

Published in:

GigaScience, 2021, v. 10, n. 1, p. 1, doi. 10.1093/gigascience/giaa141

By:

Vera Alvarez, Roberto;
Pongor, Lorinc;
Mariño-Ramírez, Leonardo;
Landsman, David

Publication type:

Article

Race, Ethnicity, and Pharmacogenomic Variation in the United States and the United Kingdom.

Published in:

Pharmaceutics, 2023, v. 15, n. 7, p. 1923, doi. 10.3390/pharmaceutics15071923

By:

Sharma, Shivam;
Mariño-Ramírez, Leonardo;
Jordan, I. King

Publication type:

Article

Abrupt Increase in Detection of Locally Acquired West-Nile-Virus-Lineage-2-Mediated Neuroinvasive Disease in a Previously Non-Endemic Area of Southern Italy (2023).

Published in:

Viruses (1999-4915), 2024, v. 16, n. 1, p. 53, doi. 10.3390/v16010053

By:

Loconsole, Daniela;
Centrone, Francesca;
Sallustio, Anna;
Casulli, Daniele;
Colella, Vito;
Mongelli, Onofrio;
Venturi, Giulietta;
Bella, Antonino;
Marino, Leonardo;
Martinelli, Domenico;
Chironna, Maria

Publication type:

Article

Microevolution of Anthrax from a Young Ancestor (M.A.Y.A.) Suggests a Soil-Borne Life Cycle of Bacillus anthracis.

Published in:

PLoS ONE, 2015, v. 10, n. 8, p. 1, doi. 10.1371/journal.pone.0135346

By:

Braun, Peter;
Grass, Gregor;
Aceti, Angela;
Serrecchia, Luigina;
Affuso, Alessia;
Marino, Leonardo;
Grimaldi, Stefania;
Pagano, Stefania;
Hanczaruk, Matthias;
Georgi, Enrico;
Northoff, Bernd;
Schöler, Anne;
Schloter, Michael;
Antwerpen, Markus;
Fasanella, Antonio

Publication type:

Article