Found: 25
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An open protocol for modeling T Cell Clonotype repertoires using TCRβ CDR3 sequences.
- Published in:
- BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09424-z
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- Publication type:
- Article
svpluscnv: analysis and visualization of complex structural variation data.
- Published in:
- Bioinformatics, 2021, v. 37, n. 13, p. 1912, doi. 10.1093/bioinformatics/btaa878
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- Publication type:
- Article
Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection.
- Published in:
- Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1539-5
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- Publication type:
- Article
Valection: design optimization for validation and verification studies.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2391-z
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- Publication type:
- Article
Population-level distribution and putative immunogenicity of cancer neoepitopes.
- Published in:
- 2018
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- Publication type:
- journal article
Germline contamination and leakage in whole genome somatic single nucleotide variant detection.
- Published in:
- BMC Bioinformatics, 2018, v. 19, p. 1, doi. 10.1186/s12859-018-2046-0
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- Publication type:
- Article
Modeling gene-wise dependencies improves the identification of drug response biomarkers in cancer studies.
- Published in:
- Bioinformatics, 2017, v. 33, n. 9, p. 1362, doi. 10.1093/bioinformatics/btw836
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- Publication type:
- Article
The NIH BD2K center for big data in translational genomics.
- Published in:
- 2015
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- Publication type:
- journal article
Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection.
- Published in:
- Nature Methods, 2015, v. 12, n. 7, p. 623, doi. 10.1038/nmeth.3407
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- Publication type:
- Article
Toward better benchmarking: challenge-based methods assessment in cancer genomics.
- Published in:
- Genome Biology, 2014, v. 15, n. 9, p. 462, doi. 10.1186/s13059-014-0462-7
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- Publication type:
- Article
Simulation Studies as Designed Experiments: The Comparison of Penalized Regression Models in the “Large p, Small n” Setting.
- Published in:
- PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0107957
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- Publication type:
- Article
Drug susceptibility prediction against a panel of drugs using kernelized Bayesian multitask learning.
- Published in:
- Bioinformatics, 2014, v. 30, n. 17, p. i556, doi. 10.1093/bioinformatics/btu464
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- Publication type:
- Article
Assessing the clinical utility of cancer genomic and proteomic data across tumor types.
- Published in:
- Nature Biotechnology, 2014, v. 32, n. 7, p. 644, doi. 10.1038/nbt.2940
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- Publication type:
- Article
Global optimization of somatic variant identification in cancer genomes with a global community challenge.
- Published in:
- Nature Genetics, 2014, v. 46, n. 4, p. 318, doi. 10.1038/ng.2932
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- Publication type:
- Article
Enabling transparent and collaborative computational analysis of 12 tumor types within The Cancer Genome Atlas.
- Published in:
- Nature Genetics, 2013, v. 45, n. 10, p. 1121, doi. 10.1038/ng.2761
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- Publication type:
- Article
Systematic Analysis of Challenge-Driven Improvements in Molecular Prognostic Models for Breast Cancer.
- Published in:
- Science Translational Medicine, 2013, v. 5, n. 181, p. 1, doi. 10.1126/scitranslmed.3006112
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- Publication type:
- Article
Addendum: The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
- Published in:
- Nature, 2012, v. 492, n. 7428, p. 290, doi. 10.1038/nature11735
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- Publication type:
- Article
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
- Published in:
- Nature, 2012, v. 483, n. 7391, p. 603, doi. 10.1038/nature11003
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- Publication type:
- Article
Empirical Bayes Analysis of Quantitative Proteomics Experiments.
- Published in:
- PLoS ONE, 2009, v. 4, n. 10, p. 1, doi. 10.1371/journal.pone.0007454
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- Publication type:
- Article
Genome-wide identification of post-translational modulators of transcription factor activity in human B cells.
- Published in:
- Nature Biotechnology, 2009, v. 27, n. 9, p. 829, doi. 10.1038/nbt.1563
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- Publication type:
- Article
Theory and Limitations of Genetic Network Inference from Microarray Data.
- Published in:
- Annals of the New York Academy of Sciences, 2007, v. 1115, p. 51, doi. 10.1196/annals.1407.019
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- Publication type:
- Article
Boolean calculations made easy (for ribozymes).
- Published in:
- Nature Biotechnology, 2005, v. 23, n. 11, p. 1374, doi. 10.1038/nbt1105-1374
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- Publication type:
- Article
CGHAnalyzer: a stand-alone software package for cancer genome analysis using array-based DNA copy number data.
- Published in:
- Bioinformatics, 2005, v. 21, n. 15, p. 3308, doi. 10.1093/bioinformatics/bti500
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- Publication type:
- Article
High-resolution detection and mapping of genomic DNA alterations in neuroblastoma.
- Published in:
- Genes, Chromosomes & Cancer, 2005, v. 43, n. 4, p. 390, doi. 10.1002/gcc.20198
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- Publication type:
- Article
Reverse engineering of regulatory networks in human B cells.
- Published in:
- Nature Genetics, 2005, v. 37, n. 4, p. 382, doi. 10.1038/ng1532
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- Publication type:
- Article