Works matching AU Mardis, Elaine R


Results: 139
    1

    Frontiers in cancer immunotherapy—a symposium report.

    Published in:
    Annals of the New York Academy of Sciences, 2021, v. 1489, n. 1, p. 30, doi. 10.1111/nyas.14526
    By:
    • Cable, Jennifer;
    • Greenbaum, Benjamin;
    • Pe'er, Dana;
    • Bollard, Catherine M.;
    • Bruni, Sofia;
    • Griffin, Matthew E.;
    • Allison, James P.;
    • Wu, Catherine J.;
    • Subudhi, Sumit K.;
    • Mardis, Elaine R.;
    • Brentjens, Renier;
    • Sosman, Jeffry A.;
    • Cemerski, Saso;
    • Zavitsanou, Anastasia‐Maria;
    • Proia, Theresa;
    • Egeblad, Mikala;
    • Nolan, Garry;
    • Goswami, Sangeeta;
    • Spranger, Stefani;
    • Mackall, Crystal L.
    Publication type:
    Article
    2

    Where Next for Genetics and Genomics?

    Published in:
    PLoS Biology, 2015, v. 13, n. 7, p. 1, doi. 10.1371/journal.pbio.1002216
    By:
    • Tyler-Smith, Chris;
    • Yang, Huanming;
    • Landweber, Laura F.;
    • Dunham, Ian;
    • Knoppers, Bartha M.;
    • Donnelly, Peter;
    • Mardis, Elaine R.;
    • Snyder, Michael;
    • McVean, Gil
    Publication type:
    Article
    3

    Viral Discovery and Sequence Recovery Using DNA Microarrays.

    Published in:
    PLoS Biology, 2003, v. 1, n. 11, p. 1, doi. 10.1371/journal.pbio.0000002
    By:
    • Wang, David;
    • Urisman, Anatoly;
    • Liu, Yu-Tsueng;
    • Springer, Michael;
    • Ksiazek, Thomas G;
    • Erdman, Dean D;
    • Mardis, Elaine R;
    • Hickenbotham, Matthew;
    • Magrini, Vincent;
    • Eldred, James;
    • Latreille, J. Phillipe;
    • Wilson, Richard K;
    • Ganem, Don;
    • DeRisi, Joseph L
    Publication type:
    Article
    4

    Viral Discovery and Sequence Recovery Using DNA Microarrays.

    Published in:
    PLoS Biology, 2003, v. 1, n. 2, p. 257, doi. 10.1371/journal.pbio.0000002
    By:
    • Wang, David;
    • Urisman, Anatoly;
    • Yu-Tsueng Liu, Anatoly;
    • Springer, Michael;
    • Ksiazek, Thomas G.;
    • Erdman, Dean D.;
    • Mardis, Elaine R.;
    • Hickenbotham, Matthew;
    • Magrini, Vincent;
    • Eldred, James;
    • Latreille, J. Phillipe;
    • Wilson, Richard K.;
    • Ganem, Don;
    • DeRisi, Joseph L.
    Publication type:
    Article
    5

    Optical Genome Mapping (OGM) Identifies Multiple Structural Variants in a Case With Atypical Phelan‐McDermid Syndrome.

    Published in:
    American Journal of Medical Genetics. Part A, 2025, v. 197, n. 3, p. 1, doi. 10.1002/ajmg.a.63929
    By:
    • Macke, Erica L.;
    • Miller, Anthony R.;
    • Colwell, Caitlyn M.;
    • Gonzalez, Maria Hernandez;
    • Hunter, Jesse;
    • Venkata, Lakshmi Prakruthi Rao;
    • Walker, Lauren;
    • Wheeler, Gregory;
    • Wilson, Richard K.;
    • Mardis, Elaine R.;
    • Miller, Katherine E.;
    • Mathew, Mariam T.;
    • Chaudhari, Bimal P.;
    • Akkari, Yassmine
    Publication type:
    Article
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    Full-length isoform concatenation sequencing to resolve cancer transcriptome complexity.

    Published in:
    BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10021-x
    By:
    • Wijeratne, Saranga;
    • Gonzalez, Maria E. Hernandez;
    • Roach, Kelli;
    • Miller, Katherine E.;
    • Schieffer, Kathleen M.;
    • Fitch, James R.;
    • Leonard, Jeffrey;
    • White, Peter;
    • Kelly, Benjamin J.;
    • Cottrell, Catherine E.;
    • Mardis, Elaine R.;
    • Wilson, Richard K.;
    • Miller, Anthony R.
    Publication type:
    Article
    8

    A burst of segmental duplications in the genome of the African great ape ancestor.

    Published in:
    Nature, 2009, v. 457, n. 7231, p. 877, doi. 10.1038/nature07744
    By:
    • Marques-Bonet, Tomas;
    • Kidd, Jeffrey M.;
    • Ventura, Mario;
    • Graves, Tina A.;
    • Cheng, Ze;
    • Hillier, LaDeana W.;
    • Jiang, Zhaoshi;
    • Baker, Carl;
    • Malfavon-Borja, Ray;
    • Fulton, Lucinda A.;
    • Alkan, Can;
    • Aksay, Gozde;
    • Girirajan, Santhosh;
    • Siswara, Priscillia;
    • Chen, Lin;
    • Cardone, Maria Francesca;
    • Navarro, Arcadi;
    • Mardis, Elaine R.;
    • Wilson, Richard K.;
    • Eichler, Evan E.
    Publication type:
    Article
    9

    DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome.

    Published in:
    Nature, 2008, v. 456, n. 7218, p. 66, doi. 10.1038/nature07485
    By:
    • Ley, Timothy J.;
    • Mardis, Elaine R.;
    • Ding, Li;
    • Fulton, Bob;
    • McLellan, Michael D.;
    • Chen, Ken;
    • Dooling, David;
    • Dunford-Shore, Brian H.;
    • McGrath, Sean;
    • Hickenbotham, Matthew;
    • Cook, Lisa;
    • Abbott, Rachel;
    • Larson, David E.;
    • Koboldt, Dan C.;
    • Pohl, Craig;
    • Smith, Scott;
    • Hawkins, Amy;
    • Abbott, Scott;
    • Locke, Devin;
    • Hillier, LaDeana W.
    Publication type:
    Article
    10

    Somatic mutations affect key pathways in lung adenocarcinoma.

    Published in:
    Nature, 2008, v. 455, n. 7216, p. 1069, doi. 10.1038/nature07423
    By:
    • Li Ding;
    • Getz, Gad;
    • Wheeler, David A.;
    • Mardis, Elaine R.;
    • McLellan, Michael D.;
    • Cibulskis, Kristian;
    • Sougnez, Carrie;
    • Greulich, Heidi;
    • Muzny, Donna M.;
    • Morgan, Margaret B.;
    • Fulton, Lucinda;
    • Fulton, Robert S.;
    • Qunyuan Zhang;
    • Wendl, Michael C.;
    • Lawrence, Michael S.;
    • Larson, David E.;
    • Chen, Ken;
    • Dooling, David J.;
    • Sabo, Aniko;
    • Hawes, Alicia C.
    Publication type:
    Article
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    Application of a superword array in genome assembly.

    Published in:
    Nucleic Acids Research, 2006, v. 34, n. 1, p. 201, doi. 10.1093/nar/gkj419
    By:
    • Huang, Xiaoqiu;
    • Yang, Shiaw-Pyng;
    • Chinwalla, Asif T.;
    • Hillier, LaDeana W.;
    • Minx, Patrick;
    • Mardis, Elaine R.;
    • Wilson, Richard K.
    Publication type:
    Article
    16

    Correspondence comprehensive characterization of a brainstem aggregoma (light and heavy chain deposition disease).

    Published in:
    Brain Pathology, 2023, v. 33, n. 5, p. 1, doi. 10.1111/bpa.13154
    By:
    • Becker, Aline P.;
    • Osorio, Diana S.;
    • Bell, Erica H.;
    • Giglio, Pierre;
    • Fleming, Jessica L.;
    • Cottrell, Catherine E.;
    • Mardis, Elaine R.;
    • Miller, Katherine E.;
    • Schieffer, Kathleen M.;
    • Kelly, Benjamin J.;
    • Makary, Mina S.;
    • Slone, Wayne;
    • Benson, Don;
    • Leonard, Jeffrey;
    • Kahwash, Samir B.;
    • Boué, Daniel R.;
    • Chakravarti, Arnab
    Publication type:
    Article
    17

    Childhood cancer data initiative: Status report.

    Published in:
    Pediatric Blood & Cancer, 2024, v. 71, n. 2, p. 1, doi. 10.1002/pbc.30745
    By:
    • Jagu, Subhashini;
    • Mardis, Elaine R.;
    • Wedekind, Mary F.;
    • Widemann, Brigitte C.;
    • Kingery, Rena K.;
    • Gonzalez, Samantha L.;
    • Shern, Jack F.;
    • Reaman, Gregory H.
    Publication type:
    Article
    18
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    No evidence that G6PD deficiency affects the efficacy or safety of daunorubicin in acute lymphoblastic leukemia induction therapy.

    Published in:
    2019
    By:
    • Robinson, Katherine M.;
    • Yang, Wenjian;
    • Karol, Seth E.;
    • Kornegay, Nancy;
    • Jay, Dennis;
    • Cheng, Cheng;
    • Choi, John K.;
    • Campana, Dario;
    • Pui, Ching‐Hon;
    • Wood, Brent;
    • Borowitz, Michael J.;
    • Gastier‐Foster, Julie;
    • Larsen, Eric C.;
    • Winick, Naomi;
    • Carroll, William L.;
    • Loh, Mignon L.;
    • Raetz, Elizabeth A.;
    • Hunger, Stephen P.;
    • Devidas, Meenakshi;
    • Mardis, Elaine R.
    Publication type:
    journal article
    20
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    The Pediatric Cancer Genome Project.

    Published in:
    Nature Genetics, 2012, v. 44, n. 6, p. 619, doi. 10.1038/ng.2287
    By:
    • Downing, James R;
    • Wilson, Richard K;
    • Zhang, Jinghui;
    • Mardis, Elaine R;
    • Pui, Ching-Hon;
    • Ding, Li;
    • Ley, Timothy J;
    • Evans, William E
    Publication type:
    Article
    22

    Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas.

    Published in:
    Nature Genetics, 2012, v. 44, n. 3, p. 251, doi. 10.1038/ng.1102
    By:
    • Wu, Gang;
    • Broniscer, Alberto;
    • McEachron, Troy A;
    • Lu, Charles;
    • Paugh, Barbara S;
    • Becksfort, Jared;
    • Qu, Chunxu;
    • Ding, Li;
    • Huether, Robert;
    • Parker, Matthew;
    • Zhang, Junyuan;
    • Gajjar, Amar;
    • Dyer, Michael A;
    • Mullighan, Charles G;
    • Gilbertson, Richard J;
    • Mardis, Elaine R;
    • Wilson, Richard K;
    • Downing, James R;
    • Ellison, David W;
    • Zhang, Jinghui
    Publication type:
    Article
    23

    The draft genome of the parasitic nematode Trichinella spiralis.

    Published in:
    Nature Genetics, 2011, v. 43, n. 3, p. 228, doi. 10.1038/ng.769
    By:
    • Mitreva, Makedonka;
    • Jasmer, Douglas P.;
    • Zarlenga, Dante S.;
    • Zhengyuan Wang;
    • Abubucker, Sahar;
    • Martin, John;
    • Taylor, Christina M.;
    • Yong Yin;
    • Fulton, Lucinda;
    • Minx, Pat;
    • Shiaw-Pyng Yang;
    • Warren, Wesley C.;
    • Fulton, Robert S.;
    • Bhonagiri, Veena;
    • Xu Zhang;
    • Hallsworth-Pepin, Kym;
    • Clifton, Sandra W.;
    • McCarter, James P.;
    • Appleton, Judith;
    • Mardis, Elaine R.
    Publication type:
    Article
    24

    Clonal Architecture of Secondary Acute Myeloid Leukemia Defined by Single-Cell Sequencing.

    Published in:
    PLoS Genetics, 2014, v. 10, n. 7, p. 1, doi. 10.1371/journal.pgen.1004462
    By:
    • Hughes, Andrew E. O.;
    • Magrini, Vincent;
    • Demeter, Ryan;
    • Miller, Christopher A.;
    • Fulton, Robert;
    • Fulton, Lucinda L.;
    • Eades, William C.;
    • Elliott, Kevin;
    • Heath, Sharon;
    • Westervelt, Peter;
    • Ding, Li;
    • Conrad, Donald F.;
    • White, Brian S.;
    • Shao, Jin;
    • Link, Daniel C.;
    • DiPersio, John F.;
    • Mardis, Elaine R.;
    • Wilson, Richard K.;
    • Ley, Timothy J.;
    • Walter, Matthew J.
    Publication type:
    Article
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    Integrated RNA and DNA sequencing reveals early drivers of metastatic breast cancer.

    Published in:
    2018
    By:
    • Siegel, Marni B.;
    • Xiaping He;
    • Hoadley, Katherine A.;
    • Hoyle, Alan;
    • Pearce, Julia B.;
    • Garrett, Amy L.;
    • Kumar, Sunil;
    • Moylan, Vincent J.;
    • Brady, Claudia M.;
    • Van Swearingen, Amanda E. D.;
    • Marron, David;
    • Gupta, Gaorav P.;
    • Thorne, Leigh B.;
    • Kieran, Niamh;
    • Livasy, Chad;
    • Mardis, Elaine R.;
    • Parker, Joel S.;
    • Mengjie Chen;
    • Anders, Carey K.;
    • Carey, Lisa A.
    Publication type:
    journal article
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    Contribution of systemic and somatic factors to clinical response and resistance to PD-L1 blockade in urothelial cancer: An exploratory multi-omic analysis.

    Published in:
    2017
    By:
    • Snyder, Alexandra;
    • Nathanson, Tavi;
    • Funt, Samuel A.;
    • Ahuja, Arun;
    • Buros Novik, Jacqueline;
    • Hellmann, Matthew D.;
    • Chang, Eliza;
    • Aksoy, Bulent Arman;
    • Al-Ahmadie, Hikmat;
    • Yusko, Erik;
    • Vignali, Marissa;
    • Benzeno, Sharon;
    • Boyd, Mariel;
    • Moran, Meredith;
    • Iyer, Gopa;
    • Robins, Harlan S.;
    • Mardis, Elaine R.;
    • Merghoub, Taha;
    • Hammerbacher, Jeff;
    • Rosenberg, Jonathan E.
    Publication type:
    journal article
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    Extending assembly of short DNA sequences to handle error.

    Published in:
    Bioinformatics, 2007, v. 23, n. 21, p. 2942, doi. 10.1093/bioinformatics/btm451
    By:
    • William R. Jeck;
    • Josephine A. Reinhardt;
    • David A. Baltrus;
    • Matthew T. Hickenbotham;
    • Vincent Magrini;
    • Elaine R. Mardis;
    • Jeffery L. Dangl;
    • Corbin D. Jones
    Publication type:
    Article
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    The Oxytricha trifallax Mitochondrial Genome.

    Published in:
    Genome Biology & Evolution, 2012, v. 4, n. 9, p. 136, doi. 10.1093/gbe/evr136
    By:
    • Swart, Estienne C.;
    • Nowacki, Mariusz;
    • Shum, Justine;
    • Stiles, Heather;
    • Higgins, Brian P.;
    • Doak, Thomas G.;
    • Schotanus, Klaas;
    • Magrini, Vincent J.;
    • Minx, Patrick;
    • Mardis, Elaine R.;
    • Landweber, Laura F.
    Publication type:
    Article
    37

    The landscape of somatic mutations in infant MLL-rearranged acute lymphoblastic leukemias.

    Published in:
    Nature Genetics, 2015, v. 47, n. 4, p. 330, doi. 10.1038/ng.3230
    By:
    • Andersson, Anna K;
    • Fioretos, Thoas;
    • Lu, Charles;
    • Ding, Li;
    • Mardis, Elaine R;
    • Wilson, Richard K;
    • Pui, Ching-Hon;
    • Gruber, Tanja A;
    • Ma, Jing;
    • Gedman, Amanda Larson;
    • Dang, Jinjun;
    • Nakitandwe, Joy;
    • Holmfeldt, Linda;
    • Raimondi, Susana;
    • Payne-Turner, Debbie;
    • Song, Guangchun;
    • Shurtleff, Sheila;
    • Mullighan, Charles G;
    • Downing, James R;
    • Wang, Jianmin
    Publication type:
    Article
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    Expanding the clinical phenotype of FGFR1 internal tandem duplication.

    Published in:
    Cold Spring Harbor Molecular Case Studies, 2022, v. 8, n. 2, p. 1, doi. 10.1101/mcs.a006174
    By:
    • Kautto, Esko A.;
    • Schieffer, Kathleen M.;
    • McGrath, Sean;
    • Miller, Anthony R.;
    • Hernandez-Gonzalez, Maria Elena;
    • Choi, Samantha;
    • Conces, Miriam R.;
    • Fernandez-Faith, Esteban;
    • Mai-Lan Ho;
    • Lee, Kristy;
    • Lillis, Anna P.;
    • Pearson, Gregory D.;
    • Kaler, Stephen G.;
    • Wilson, Richard K.;
    • Mardis, Elaine R.;
    • Magrini, Vincent;
    • Leonard, Jeffrey;
    • Cottrell, Catherine E.
    Publication type:
    Article
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    Disease-associated mosaic variation in clinical exome sequencing: a two-year pediatric tertiary care experience.

    Published in:
    Cold Spring Harbor Molecular Case Studies, 2020, v. 6, n. 3, p. 1, doi. 10.1101/mcs.a005231
    By:
    • Miller, Cecelia R.;
    • Lee, Kristy;
    • Pfau, Ruthann B.;
    • Reshmi, Shalini C.;
    • Corsmeier, Donald J.;
    • Sayaka Hashimoto;
    • Dave-Wala, Ashita;
    • Jayaraman, Vijayakumar;
    • Koboldt, Daniel;
    • Matthews, Theodora;
    • Mouhlas, Danielle;
    • Stein, Maggie;
    • McKinney, Aimee;
    • Grossman, Tom;
    • Kelly, Benjamin J.;
    • White, Peter;
    • Magrini, Vincent;
    • Wilson, Richard K.;
    • Mardis, Elaine R.;
    • Cottrell, Catherine E.
    Publication type:
    Article
    46

    LINC00355 regulates p27<sup>KIP</sup> expression by binding to MENIN to induce proliferation in late-stage relapse breast cancer.

    Published in:
    NPJ Breast Cancer, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41523-022-00412-2
    By:
    • Eteleeb, Abdallah M.;
    • Thunuguntla, Prasanth K.;
    • Gelev, Kyla Z.;
    • Tang, Cynthia Y.;
    • Rozycki, Emily B.;
    • Miller, Alexander;
    • Lei, Jonathan T.;
    • Jayasinghe, Reyka G.;
    • Dang, Ha X.;
    • White, Nicole M.;
    • Reis-Filho, Jorge S.;
    • Mardis, Elaine R.;
    • Ellis, Matthew J.;
    • Li Ding;
    • Silva-Fisher, Jessica M.;
    • Maher, Christopher A.
    Publication type:
    Article
    47

    Brief Report: The Role of Rare Protein-Coding Variants in Anti-Tumor Necrosis Factor Treatment Response in Rheumatoid Arthritis.

    Published in:
    Arthritis & Rheumatology, 2017, v. 69, n. 4, p. 735, doi. 10.1002/art.39966
    By:
    • Cui, Jing;
    • Diogo, Dorothee;
    • Stahl, Eli A.;
    • Canhao, Helena;
    • Mariette, Xavier;
    • Greenberg, Jeffrey D.;
    • Okada, Yukinori;
    • Pappas, Dimitrios A.;
    • Fulton, Robert S.;
    • Tak, Paul P.;
    • Nurmohamed, Michael T.;
    • Lee, Annette;
    • Larson, David E.;
    • Kurreeman, Fina;
    • Deluca, Tracie L.;
    • O'Laughlin, Michelle;
    • Fronick, Catrina C.;
    • Fulton, Lucinda L.;
    • Mardis, Elaine R.;
    • van der Horst‐Bruinsma, Irene E.
    Publication type:
    Article
    48

    Challenges of sequencing human genomes.

    Published in:
    Briefings in Bioinformatics, 2010, v. 11, n. 5, p. 484, doi. 10.1093/bib/bbq016
    By:
    • Koboldt, Daniel C.;
    • Ding, Li;
    • Mardis, Elaine R.;
    • Wilson, Richard K.
    Publication type:
    Article
    49

    Detection of neoantigen-specific T cells following a personalized vaccine in a patient with glioblastoma.

    Published in:
    OncoImmunology, 2019, v. 8, n. 4, p. 1, doi. 10.1080/2162402X.2018.1561106
    By:
    • Johanns, Tanner M.;
    • Miller, Christopher A.;
    • Liu, Connor J.;
    • Perrin, Richard J.;
    • Bender, Diane;
    • Kobayashi, Dale K.;
    • Campian, Jian L.;
    • Chicoine, Michael R.;
    • Dacey, Ralph G.;
    • Huang, Jiayi;
    • Fritsch, Edward F.;
    • Gillanders, William E.;
    • Artyomov, Maxim N.;
    • Mardis, Elaine R.;
    • Schreiber, Robert D.;
    • Dunn, Gavin P.
    Publication type:
    Article
    50