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InterPro in 2019: improving coverage, classification and access to protein sequence annotations.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. D1, p. D351, doi. 10.1093/nar/gky1100
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- Article
Database resources of the National Center for Biotechnology Information.
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- Nucleic Acids Research, 2019, v. 47, n. D1, p. D23, doi. 10.1093/nar/gky1069
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- Article
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.
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- Nucleic Acids Research, 2017, v. 45, n. D1, p. D200, doi. 10.1093/nar/gkw1129
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InterPro in 2017--beyond protein family and domain annotations.
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- Nucleic Acids Research, 2017, v. 45, n. D1, p. D190, doi. 10.1093/nar/gkw1107
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- Article
CDD: NCBI's conserved domain database.
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- Nucleic Acids Research, 2015, v. 43, n. D1, p. D222, doi. 10.1093/nar/gku1221
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- Article
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
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- Nucleic Acids Research, 2014, v. 42, n. D1, p. D297, doi. 10.1093/nar/gkt1208
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- Article
CDD: conserved domains and protein three-dimensional structure.
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- Nucleic Acids Research, 2013, v. 41, p. D348, doi. 10.1093/nar/gks1243
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- Article
IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins.
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- Nucleic Acids Research, 2012, p. D834, doi. 10.1093/nar/gkr997
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- Article
MMDB: 3D structures and macromolecular interactions.
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- Nucleic Acids Research, 2012, p. D461, doi. 10.1093/nar/gkr1162
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- Article
CDD: a Conserved Domain Database for the functional annotation of proteins.
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- Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D225, doi. 10.1093/nar/gkq1189
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- Article
AlexSys: a knowledge-based expert system for multiple sequence alignment construction and analysis.
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- Nucleic Acids Research, 2010, v. 38, n. 19, p. 6338, doi. 10.1093/nar/gkq526
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- Article
The NCBI BioSystems database.
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- Nucleic Acids Research, 2010, v. 38, p. D492, doi. 10.1093/nar/gkp858
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- Article
Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites.
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- Nucleic Acids Research, 2010, v. 38, p. D518, doi. 10.1093/nar/gkp842
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- Publication type:
- Article
CDD: specific functional annotation with the Conserved Domain Database.
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- Nucleic Acids Research, 2009, v. 37, n. suppl_1, p. D205, doi. 10.1093/nar/gkn845
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- Article
MMDB: annotating protein sequences with Entrez's 3D-structure database.
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- Nucleic Acids Research, 2007, v. 35, p. d298, doi. 10.1093/nar/gkl952
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- Article
CDD: a conserved domain database for interactive domain family analysis.
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- Nucleic Acids Research, 2007, v. 35, p. d237, doi. 10.1093/nar/gkl951
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- Article
Knowledge-based expert systems and a proof-of-concept case study for multiple sequence alignment construction and analysis.
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- Briefings in Bioinformatics, 2009, v. 10, n. 1, p. 11, doi. 10.1093/bib/bbn045
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- Article
Comparison of sequence and structure alignments for protein domains.
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- Proteins, 2002, v. 48, n. 3, p. 439, doi. 10.1002/prot.10163
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- Article
Threading with explicit models for evolutionary conservation of structure and sequence.
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- Proteins, 1999, v. 37, n. S3, p. 133, doi. 10.1002/(SICI)1097-0134(1999)37:3+<133::AID-PROT18>3.0.CO;2-D
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- Article
A measure of progress in fold recognition?
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- Proteins, 1999, v. 37, n. S3, p. 218, doi. 10.1002/(SICI)1097-0134(1999)37:3+<218::AID-PROT28>3.0.CO;2-X
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- Article
A retrospective analysis of CASP2 threading predictions.
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- Proteins, 1997, v. 29, n. S1, p. 83, doi. 10.1002/(SICI)1097-0134(1997)1+<83::AID-PROT12>3.0.CO;2-N
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- Article
Measures of threading specificity and accuracy.
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- Proteins, 1997, v. 29, n. S1, p. 74, doi. 10.1002/(SICI)1097-0134(1997)1+<74::AID-PROT11>3.0.CO;2-O
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- Publication type:
- Article
Obtaining extremely large and accurate protein multiple sequence alignments from curated hierarchical alignments.
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- Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa042
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- Article
PubMed Text Similarity Model and its application to curation efforts in the Conserved Domain Database.
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- Database: The Journal of Biological Databases & Curation, 2019, v. 2019, p. N.PAG, doi. 10.1093/database/baz064
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- Article
Improving the consistency of domain annotation within the Conserved Domain Database.
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- Database: The Journal of Biological Databases & Curation, 2015, v. 2015, p. 1, doi. 10.1093/database/bav012
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- Article
Annotation of functional sites with the Conserved Domain Database.
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- Database: The Journal of Biological Databases & Curation, 2012, v. 2012, p. 1, doi. 10.1093/database/bar058
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- Publication type:
- Article
Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes.
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- Database: The Journal of Biological Databases & Curation, 2011, v. 2011, n. 19, p. 1
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- Publication type:
- Article
Automated hierarchical classification of protein domain subfamilies based on functionally-divergent residue signatures.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-144
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- Article
CDD: a Conserved Domain Database for protein classification.
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- Nucleic Acids Research, 2005, v. 33, n. suppl 1, p. d192
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- Article
CD-Search: protein domain annotations on the fly.
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- Nucleic Acids Research, 2004, v. 32, n. suppl 2, p. w327, doi. 10.1093/nar/gkh454
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- Article
CDD: a curated Entrez database of conserved domain alignments.
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- Nucleic Acids Research, 2003, v. 31, n. 1, p. 383, doi. 10.1093/nar/gkg087
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- Article
MMDB: Entrez's 3D-structure database.
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- Nucleic Acids Research, 2003, v. 31, n. 1, p. 474, doi. 10.1093/nar/gkg086
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- Publication type:
- Article
CDD: a database of conserved domain alignments with links to domain three-dimensional structure.
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- Nucleic Acids Research, 2002, v. 30, n. 1, p. 281, doi. 10.1093/nar/30.1.281
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- Article
MMDB: Entrez’s 3D-structure database.
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- Nucleic Acids Research, 2002, v. 30, n. 1, p. 249, doi. 10.1093/nar/30.1.249
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- Article
MMDB: 3D structure data in Entrez.
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- Nucleic Acids Research, 2000, v. 28, n. 1, p. 243, doi. 10.1093/nar/28.1.243
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- Article
MMDB: Entrez's 3D structure database.
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- Nucleic Acids Research, 1999, v. 27, n. 1, p. 240
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- Publication type:
- Article
The NIH Comparative Genomics Resource: addressing the promises and challenges of comparative genomics on human health.
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- BMC Genomics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12864-023-09643-4
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- Article
InterPro in 2022.
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- Nucleic Acids Research, 2023, v. 51, n. D1, p. D418, doi. 10.1093/nar/gkac993
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- Article
conserved domain database in 2023.
- Published in:
- Nucleic Acids Research, 2023, v. 51, n. D1, p. D384, doi. 10.1093/nar/gkac1096
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- Publication type:
- Article
Database resources of the national center for biotechnology information.
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- Nucleic Acids Research, 2022, v. 50, n. D1, p. D20, doi. 10.1093/nar/gkab1112
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- Article
The InterPro protein families and domains database: 20 years on.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. D1, p. D344, doi. 10.1093/nar/gkaa977
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- Article
Database resources of the National Center for Biotechnology Information.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. D1, p. D10, doi. 10.1093/nar/gkaa892
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- Publication type:
- Article
CDD/SPARCLE: the conserved domain database in 2020.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. D1, p. D265, doi. 10.1093/nar/gkz991
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- Publication type:
- Article
iCn3D, a web-based 3D viewer for sharing 1D/2D/3D representations of biomolecular structures.
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- Bioinformatics, 2020, v. 36, n. 1, p. 131, doi. 10.1093/bioinformatics/btz502
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- Article
cddApp: a Cytoscape app for accessing the NCBI conserved domain database.
- Published in:
- Bioinformatics, 2015, v. 31, n. 1, p. 134, doi. 10.1093/bioinformatics/btu605
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- Publication type:
- Article
CORAL: aligning conserved core regions across domain families.
- Published in:
- Bioinformatics, 2009, v. 25, n. 15, p. 1862, doi. 10.1093/bioinformatics/btp334
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- Article