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Widespread Inter- and Intra-Domain Horizontal Gene Transfer of D-Amino Acid Metabolism Enzymes in Eukaryotes.
- Published in:
- Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.02001
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- Publication type:
- Article
Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.).
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- BMC Biology, 2020, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12915-020-00881-6
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- Article
Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events.
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- BMC Biology, 2018, v. 16, p. 1, doi. 10.1186/s12915-018-0482-y
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- Article
PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.
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- Nucleic Acids Research, 2014, v. 42, n. D1, p. D897, doi. 10.1093/nar/gkt1177
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- Article
TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees.
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- Nucleic Acids Research, 2011, v. 39, n. 10, p. e66, doi. 10.1093/nar/gkr087
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- Publication type:
- Article
PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions.
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- Nucleic Acids Research, 2011, v. 39, n. suppl_1, p. D556, doi. 10.1093/nar/gkq1109
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- Publication type:
- Article
Chromosome-level assemblies from diverse clades reveal limited structural and gene content variation in the genome of Candida glabrata.
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- BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01412-1
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- Article
Genome sequence of the olive tree, Olea europaea.
- Published in:
- GigaScience, 2016, v. 5, p. 1, doi. 10.1186/s13742-016-0134-5
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- Article
Parental origin of the allotetraploid tobacco Nicotiana benthamiana.
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- Plant Journal, 2020, v. 102, n. 3, p. 541, doi. 10.1111/tpj.14648
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- Article
The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome.
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- PLoS ONE, 2009, v. 4, n. 2, p. 1, doi. 10.1371/journal.pone.0004357
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- Article
Genome sequencing and secondary metabolism of the postharvest pathogen Penicillium griseofulvum.
- Published in:
- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-015-2347-x
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- Publication type:
- Article
A study of the DNA damage checkpoint in Candida albicans: uncoupling of the functions of Rad53 in DNA repair, cell cycle regulation and genotoxic stress-induced polarized growth.
- Published in:
- Molecular Microbiology, 2014, v. 91, n. 3, p. 452, doi. 10.1111/mmi.12471
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- Article
Selection following Gene Duplication Shapes Recent Genome Evolution in the Pea Aphid Acyrthosiphon pisum.
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- Molecular Biology & Evolution, 2020, v. 37, n. 9, p. 2601, doi. 10.1093/molbev/msaa110
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- Article
Phylogenomics Identifies an Ancestral Burst of Gene Duplications Predating the Diversification of Aphidomorpha.
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- Molecular Biology & Evolution, 2020, v. 37, n. 3, p. 730, doi. 10.1093/molbev/msz261
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- Publication type:
- Article
Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication.
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- Molecular Biology & Evolution, 2018, v. 35, n. 7, p. 1712, doi. 10.1093/molbev/msy066
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- Publication type:
- Article
Whole genome analysis of two sympatric human Mansonella: Mansonella perstans and Mansonella sp "DEUX".
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- Frontiers in Cellular & Infection Microbiology, 2023, p. 1, doi. 10.3389/fcimb.2023.1159814
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- Article
Contrasting Genomic Diversity in Two Closely Related Postharvest Pathogens: Penicillium digitatum and Penicillium expansum.
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- Genome Biology & Evolution, 2016, v. 8, n. 1, p. 218, doi. 10.1093/gbe/evv252
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- Article
Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream.
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- Genome Biology & Evolution, 2015, v. 7, n. 7, p. 1988, doi. 10.1093/gbe/evv121
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- Article
Complete DNA Sequence of Kuraishia capsulata Illustrates Novel Genomic Features among Budding Yeasts (Saccharomycotina).
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- Genome Biology & Evolution, 2013, v. 5, n. 12, p. 2524, doi. 10.1093/gbe/evt201
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- Article
Systematic Phenotyping of a Large-Scale <i>Candida glabrata</i> Deletion Collection Reveals Novel Antifungal Tolerance Genes.
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- PLoS Pathogens, 2014, v. 10, n. 6, p. 1, doi. 10.1371/journal.ppat.1004211
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- Article
Regulatory Mechanisms of a Highly Pectinolytic Mutant of Penicillium occitanis and Functional Analysis of a Candidate Gene in the Plant Pathogen Fusarium oxysporum.
- Published in:
- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01627
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- Publication type:
- Article
Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage.
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- PLoS Biology, 2015, v. 13, n. 8, p. 1, doi. 10.1371/journal.pbio.1002220
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- Article
Corrigendum: Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts.
- Published in:
- Scientific Reports, 2015, p. 12596, doi. 10.1038/srep12596
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- Article
Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts.
- Published in:
- Scientific Reports, 2015, p. 11571, doi. 10.1038/srep11571
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- Publication type:
- Article
Quest for Orthologs orthology benchmark service in 2022.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. W1, p. W623, doi. 10.1093/nar/gkac330
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- Publication type:
- Article
PhylomeDB V5: an expanding repository for genome-wide catalogues of annotated gene phylogenies.
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- Nucleic Acids Research, 2022, v. 50, n. D1, p. D1062, doi. 10.1093/nar/gkab966
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- Publication type:
- Article
Human tRNAs with inosine 34 are essential to efficiently translate eukarya-specific low-complexity proteins.
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- Nucleic Acids Research, 2021, v. 49, n. 12, p. 7011, doi. 10.1093/nar/gkab461
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- Article
Gene flow contributes to diversification of the major fungal pathogen Candida albicans.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04787-4
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- Article
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx.
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- Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-1090-1
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- Article
Regulation of Candida glabrata oxidative stress resistance is adapted to host environment
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- FEBS Letters, 2011, v. 585, n. 2, p. 319, doi. 10.1016/j.febslet.2010.12.006
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- Article
Gene Expansion Shapes Genome Architecture in the Human Pathogen <i>Lichtheimia corymbifera</i>: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucoromycotina).
- Published in:
- PLoS Genetics, 2014, v. 10, n. 8, p. 1, doi. 10.1371/journal.pgen.1004496
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- Article
The Genome and Development-Dependent Transcriptomes of <i>Pyronema confluens</i>: A Window into Fungal Evolution.
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- PLoS Genetics, 2013, v. 9, n. 9, p. 1, doi. 10.1371/journal.pgen.1003820
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- Article
Comparative Genomics Used to Predict Virulence Factors and Metabolic Genes among Monilinia Species.
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- Journal of Fungi, 2021, v. 7, n. 6, p. 1, doi. 10.3390/jof7060464
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- Article
Comparative genomics of emerging pathogens in the Candida glabrata clade.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-623
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- Publication type:
- Article
Genome sequence of the necrotrophic fungus Penicillium digitatum, the main postharvest pathogen of citrus.
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- BMC Genomics, 2012, v. 13, n. 1, p. 646, doi. 10.1186/1471-2164-13-646
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- Publication type:
- Article
The Schistosoma mansoni phylome: using evolutionary genomics to gain insight into a parasite's biology.
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- BMC Genomics, 2012, v. 13, n. 1, p. 617, doi. 10.1186/1471-2164-13-617
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- Publication type:
- Article
Chromatin profiling reveals heterogeneity in clinical isolates of the human pathogen Aspergillus fumigatus.
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- PLoS Genetics, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pgen.1010001
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- Article
EvolClust: automated inference of evolutionary conserved gene clusters in eukaryotes.
- Published in:
- Bioinformatics, 2020, v. 36, n. 4, p. 1265, doi. 10.1093/bioinformatics/btz706
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- Article
Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad.
- Published in:
- DNA Research, 2022, v. 29, n. 3, p. 1, doi. 10.1093/dnares/dsac013
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- Article
Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life.
- Published in:
- DNA Research, 2016, v. 23, n. 3, p. 181, doi. 10.1093/dnares/dsw007
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- Publication type:
- Article
Correction: Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucoromycotina).
- Published in:
- 2016
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- Publication type:
- Correction Notice