Works by Makarova, Kira S.
Results: 92
Early vertebrate origin and diversification of small transmembrane regulators of cellular ion transport.
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- Journal of Physiology, 2017, v. 595, n. 14, p. 4611, doi. 10.1113/JP274254
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- Article
Evolution of plant δµ-pyrroline-5-carboxylate reductases from phylogenetic and structural perspectives.
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- Frontiers in Plant Science, 2015, p. 1, doi. 10.3389/fpls.2015.00567
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- Article
A Unique Gene Module in Thermococcales Archaea Centered on a Hypervariable Protein Containing Immunoglobulin Domains.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.721392
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Systematic prediction of functionally linked genes in bacterial and archaeal genomes.
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- Nature Protocols, 2019, v. 14, n. 10, p. 3013, doi. 10.1038/s41596-019-0211-1
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- Article
Inventing the dynamo machine: the evolution of the F-type and V-type ATPases.
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- Nature Reviews Microbiology, 2007, v. 5, n. 11, p. 892, doi. 10.1038/nrmicro1767
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- Article
In vivo genome editing using Staphylococcus aureus Cas9.
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- Nature, 2015, v. 520, n. 7546, p. 186, doi. 10.1038/nature14299
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- Article
Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia".
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- Genes, 2018, v. 9, n. 2, p. 28, doi. 10.3390/genes9020028
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Mobile Genetic Elements and Evolution of CRISPR-Cas Systems: All theWay There and Back.
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- Genome Biology & Evolution, 2017, v. 9, n. 10, p. 2812, doi. 10.1093/gbe/evx192
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Extreme Deviations from Expected Evolutionary Rates in Archaeal Protein Families.
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- Genome Biology & Evolution, 2017, v. 9, n. 10, p. 2791, doi. 10.1093/gbe/evx189
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Recent Mobility of Casposons, Self-Synthesizing Transposons at the Origin of the CRISPR-Cas Immunity.
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- Genome Biology & Evolution, 2016, v. 8, n. 2, p. 375, doi. 10.1093/gbe/evw006
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- Article
Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity.
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- BMC Biology, 2014, v. 12, n. 1, p. 1, doi. 10.1186/1741-7007-12-36
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Evolution of replicative DNA polymerases in archaea and their contributions to the eukaryotic replication machinery.
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- Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00354
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Evolution of replicative DNA polymerases in archaea and their contributions to the eukaryotic replication machinery.
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- Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00354
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- Article
‘ARMAN’ archaea depend on association with euryarchaeal host in culture and in situ.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00104-7
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A primase subunit essential for efficient primer synthesis by an archaeal eukaryotic-type primase.
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- Nature Communications, 2015, v. 6, n. 6, p. 7300, doi. 10.1038/ncomms8300
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Babela massiliensis, a representative of a widespread bacterial phylum with unusual adaptations to parasitism in amoebae.
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- Biology Direct, 2015, v. 10, n. 1, p. 1, doi. 10.1186/s13062-015-0043-z
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Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing.
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- Biology Direct, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1745-6150-8-15
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Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park.
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- Biology Direct, 2013, v. 8, n. 1, p. 1, doi. 10.1186/1745-6150-8-9
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Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer.
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- Biology Direct, 2012, v. 7, n. 1, p. 46, doi. 10.1186/1745-6150-7-46
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Live virus-free or die: coupling of antivirus immunity and programmed suicide or dormancy in prokaryotes.
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- Biology Direct, 2012, v. 7, n. 1, p. 40, doi. 10.1186/1745-6150-7-40
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Two families of the FtsZ-tubulin protein superfamily implicated in membrane remodeling in diverse bacteria and archaea.
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- Biology Direct, 2010, v. 5, p. 33, doi. 10.1186/1745-6150-5-33
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Evolution of DNA polymerases: an inactivated polymerase-exonuclease module in Pol ϵ and a chimeric origin of eukaryotic polymerases from two classes of archaeal ancestors.
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- Biology Direct, 2009, v. 4, p. 1, doi. 10.1186/1745-6150-4-11
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A highly conserved family of inactivated archaeal B family DNA polymerases.
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- Biology Direct, 2008, v. 3, p. 1, doi. 10.1186/1745-6150-3-32
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Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia.
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- Biology Direct, 2008, v. 3, p. 1, doi. 10.1186/1745-6150-3-26
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The prokaryotic V4R domain is the likely ancestor of a key component of the eukaryotic vesicle transport system.
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- Biology Direct, 2008, v. 3, p. 1, doi. 10.1186/1745-6150-3-2
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Evolutionary primacy of sodium bioenergetics.
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- Biology Direct, 2008, v. 3, p. 1, doi. 10.1186/1745-6150-3-13
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Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea.
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- Biology Direct, 2007, v. 2, p. 33, doi. 10.1186/1745-6150-2-33
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Orthologs of the small RPB8 subunit of the eukaryotic RNApolymerases are conserved in hyperthermophilic Crenarchaeotaand "Korarchaeota".
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- Biology Direct, 2007, v. 2, p. 38, doi. 10.1186/1745-6150-2-38
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- Article
Comparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistance.
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- BMC Evolutionary Biology, 2005, v. 5, p. 1, doi. 10.1186/1471-2148-5-57
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Microbial genome analysis: the COG approach.
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- Briefings in Bioinformatics, 2019, p. 1063, doi. 10.1093/bib/bbx117
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Diversity and Evolution of Type IV pili Systems in Archaea.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00667
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Engineering of CRISPR-Cas12b for human genome editing.
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- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08224-4
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Expression, Splicing, and Evolution of the Myosin Gene Family in Plants.
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- Plant Physiology, 2011, v. 155, n. 3, p. 1191, doi. 10.1104/pp.110.170720
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An updated evolutionary classification of CRISPR-Cas systems.
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- Nature Reviews Microbiology, 2015, v. 13, n. 11, p. 722, doi. 10.1038/nrmicro3569
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Evolution and classification of the CRISPR-Cas systems.
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- 2011
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- Opinion
Evolution of diverse cell division and vesicle formation systems in Archaea.
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- Nature Reviews Microbiology, 2010, v. 8, n. 10, p. 731, doi. 10.1038/nrmicro2406
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- Article
Identification of Myosin XI Receptors in Arabidopsis Defines a Distinct Class of Transport Vesicles.
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- Plant Cell, 2013, v. 25, n. 8, p. 3022, doi. 10.1105/tpc.113.113704
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Integrated mobile genetic elements in Thaumarchaeota.
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- Environmental Microbiology, 2019, v. 21, n. 6, p. 2056, doi. 10.1111/1462-2920.14564
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Cellular differentiation into hyphae and spores in halophilic archaea.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37389-w
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- Article
Structure of the IscB–ωRNA ribonucleoprotein complex, the likely ancestor of CRISPR-Cas9.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-34378-3
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Comparative genomics and evolution of trans-activating RNAs in Class 2 CRISPR-Cas systems.
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- RNA Biology, 2019, v. 16, n. 4, p. 435, doi. 10.1080/15476286.2018.1493331
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Evolution of an RNA-based adaptive immunity system in prokaryotes.
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- RNA Biology, 2013, v. 10, n. 5, p. 679, doi. 10.4161/rna.24022
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Phylogenomics of Cas4 family nucleases.
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- BMC Evolutionary Biology, 2017, v. 17, p. 1, doi. 10.1186/s12862-017-1081-1
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Reconstruction of the evolution of microbial defense systems.
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- BMC Evolutionary Biology, 2017, v. 17, p. 1, doi. 10.1186/s12862-017-0942-y
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- Article
GINS, a central nexus in the archaeal DNA replication fork.
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- EMBO Reports, 2006, v. 7, n. 5, p. 539, doi. 10.1038/sj.embor.7400649
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ATGL has a key role in lipid droplet/adiposome degradation in mammalian cells.
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- EMBO Reports, 2006, v. 7, n. 1, p. 106, doi. 10.1038/sj.embor.7400559
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Ancestral paralogs and pseudoparalogs and their role in the emergence of the eukaryotic cell.
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- Nucleic Acids Research, 2005, v. 33, n. 14, p. 4626, doi. 10.1093/nar/gki775
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Comparative genomics of the FtsK–HerA superfamily of pumping ATPases: implications for the origins of chromosome segregation, cell division and viral capsid packaging.
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- Nucleic Acids Research, 2004, v. 32, n. 17, p. 5260, doi. 10.1093/nar/gkh828
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Identification and functional analysis of ‘hypothetical’ genes expressed in Haemophilus influenzae.
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- Nucleic Acids Research, 2004, v. 32, n. 8, p. 2353, doi. 10.1093/nar/gkh555
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Congruent evolution of different classes of non‐coding DNA in prokaryotic genomes.
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- Nucleic Acids Research, 2002, v. 30, n. 19, p. 4264, doi. 10.1093/nar/gkf549
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- Article