Works by Mahardja, Brian

Results: 30

Striped bass (Morone saxatilis) migration timing driven by estuary outflow and sea surface temperature in the San Francisco Bay-Delta, California.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-020-80517-5

By:

Goertler, Pascale;
Mahardja, Brian;
Sommer, Ted

Publication type:

Article

Evidence of a Shift in the Littoral Fish Community of the Sacramento-San Joaquin Delta.

Published in:

PLoS ONE, 2017, v. 12, n. 1, p. 1, doi. 10.1371/journal.pone.0170683

By:

Mahardja, Brian;
Farruggia, Mary Jade;
Schreier, Brian;
Sommer, Ted

Publication type:

Article

Role of freshwater floodplain-tidal slough complex in the persistence of the endangered delta smelt.

Published in:

PLoS ONE, 2019, v. 14, n. 01, p. 1, doi. 10.1371/journal.pone.0208084

By:

Mahardja, Brian;
Hobbs, James A.;
Ikemiyagi, Naoaki;
Benjamin, Alyssa;
Finger, Amanda J.

Publication type:

Article

Warming in the upper San Francisco Estuary: Patterns of water temperature change from five decades of data.

Published in:

Limnology & Oceanography, 2022, v. 67, n. 5, p. 1065, doi. 10.1002/lno.12057

By:

Bashevkin, Samuel M.;
Mahardja, Brian;
Brown, Larry R.

Publication type:

Article

Seasonally variable relationships between surface water temperature and inflow in the upper San Francisco Estuary.

Published in:

Limnology & Oceanography, 2022, v. 67, n. 3, p. 684, doi. 10.1002/lno.12027

By:

Bashevkin, Samuel M.;
Mahardja, Brian

Publication type:

Article

Impacts of water hyacinth treatment on water quality in a tidal estuarine environment.

Published in:

Biological Invasions, 2019, v. 21, n. 12, p. 3479, doi. 10.1007/s10530-019-02061-2

By:

Tobias, Vanessa D.;
Conrad, J. Louise;
Mahardja, Brian;
Khanna, Shruti

Publication type:

Article

Recruitment dynamics of non-native largemouth bass within the Sacramento–San Joaquin Delta.

Published in:

Canadian Journal of Fisheries & Aquatic Sciences, 2021, v. 78, n. 5, p. 505, doi. 10.1139/cjfas-2020-0241

By:

Huntsman, Brock M.;
Feyrer, Frederick;
Young, Matthew J.;
Hobbs, James A.;
Acuña, Shawn;
Kirsch, Joseph E.;
Mahardja, Brian;
Teh, Swee

Publication type:

Article

Metapopulation structure of a semi-anadromous fish in a dynamic environment.

Published in:

Canadian Journal of Fisheries & Aquatic Sciences, 2015, v. 72, n. 5, p. 709, doi. 10.1139/cjfas-2014-0433

By:

Feyrer, Frederick;
Hobbs, James;
Acuna, Shawn;
Mahardja, Brian;
Grimaldo, Lenny;
Baerwald, Melinda;
Johnson, Rachel C.;
Teh, Swee;
Fisk, Aaron

Publication type:

Article

Hierarchical patterns of population structure in the endangered Fraser River white sturgeon ( Acipenser transmontanus) and implications for conservation.

Published in:

Canadian Journal of Fisheries & Aquatic Sciences, 2012, v. 69, n. 12, p. 1968, doi. 10.1139/f2012-120

By:

Schreier, Andrea Drauch;
Mahardja, Brian;
May, Bernie;
Moran, Paloma

Publication type:

Article

Use of single nucleotide polymorphisms identifies backcrossing and species misidentifications among three San Francisco estuary osmerids.

Published in:

Conservation Genetics, 2018, v. 19, n. 3, p. 701, doi. 10.1007/s10592-018-1048-9

By:

Benjamin, Alyssa;
Sağlam, İsmail K.;
Mahardja, Brian;
Hobbs, James;
Hung, Tien-Chieh;
Finger, Amanda J.

Publication type:

Article

Interannual variation in connectivity and comparison of effective population size between two splittail ( Pogonichthys macrolepidotus) populations in the San Francisco Estuary.

Published in:

Conservation Genetics, 2015, v. 16, n. 2, p. 385, doi. 10.1007/s10592-014-0665-1

By:

Mahardja, Brian;
May, Bernie;
Feyrer, Frederick;
Coalter, Robert;
Fangue, Nann;
Foin, Ted;
Baerwald, Melinda

Publication type:

Article

Hybridization between delta smelt and two other species within the family Osmeridae in the San Francisco Bay-Delta.

Published in:

Conservation Genetics, 2014, v. 15, n. 2, p. 489, doi. 10.1007/s10592-013-0555-y

By:

Fisch, Kathleen;
Mahardja, Brian;
Burton, Ronald;
May, Bernie

Publication type:

Article

Escape from the heat: thermal stratification in a well-mixed estuary and implications for fish species facing a changing climate.

Published in:

Hydrobiologia, 2022, v. 849, n. 13, p. 2895, doi. 10.1007/s10750-022-04886-w

By:

Mahardja, Brian;
Bashevkin, Samuel M.;
Pien, Catarina;
Nelson, Michelle;
Davis, Brittany E.;
Hartman, Rosemary

Publication type:

Article

A Conservation Hatchery Population of Delta Smelt Shows Evidence of Genetic Adaptation to Captivity After 9 Generations.

Published in:

Journal of Heredity, 2018, v. 109, n. 6, p. 689, doi. 10.1093/jhered/esy035

By:

Finger, Amanda J;
Mahardja, Brian;
Fisch, Kathleen M;
Benjamin, Alyssa;
Lindberg, Joan;
Ellison, Luke;
Ghebremariam, Tewdros;
Hung, Tien-Chieh;
May, Bernie

Publication type:

Article

Regional Diversity Trends of Nearshore Fish Assemblages of the Upper San Francisco Estuary.

Published in:

San Francisco Estuary & Watershed Science, 2024, v. 22, n. 2, p. 1, doi. 10.15447/sfews.2024v22iss2art4

By:

McKenzie, Ryan;
Gredzens, Christian;
Mahardja, Brian

Publication type:

Article

Wakasagi in the San Francisco Bay Delta Watershed: Comparative Trends in Distribution and Life-History Traits with Native Delta Smelt.

Published in:

San Francisco Estuary & Watershed Science, 2022, v. 20, n. 3, p. 1, doi. 10.15447/sfews.2022v20iss3art2

By:

Davis, Brittany E.;
Adams, Jesse B.;
Lewis, Levi S.;
Hobbs, James A.;
Ikemiyagi, Naoaki;
Johnston, Catherine;
Mitchell, Lara;
Shakya, Anjali;
Schreier, Brian M.;
Mahardja, Brian

Publication type:

Article

Climate Change Effects on San Francisco Estuary Aquatic Ecosystems: A Review.

Published in:

San Francisco Estuary & Watershed Science, 2022, v. 20, n. 2, p. 1, doi. 10.15447/sfews.2022v20iss2art1

By:

Herbold, Bruce;
Bush, Eva;
Castillo, Gonzalo;
Colombano, Denise;
Hartman, Rosemary;
Lehman, Peggy;
Mahardja, Brian;
Sommer, Ted

Publication type:

Article

Relative Bias in Catch Among Long-Term Fish Monitoring Surveys Within the San Francisco Estuary.

Published in:

San Francisco Estuary & Watershed Science, 2022, v. 20, n. 1, p. 1, doi. 10.15447/sfews.2022v20iss1art3

By:

Huntsman, Brock M.;
Mahardja, Brian;
Bashevkin, Samuel M.

Publication type:

Article

Leveraging Delta Smelt Monitoring for Detecting Juvenile Chinook Salmon in the San Francisco Estuary.

Published in:

San Francisco Estuary & Watershed Science, 2021, v. 19, n. 1, p. 1, doi. 10.15447//sfews.2020v19iss1art2

By:

Mahardja, Brian;
Mitchell, Lara;
Beakes, Michael;
Johnston, Catherine;
Graham, Cory;
Goertler, Pascale;
Barnard, Denise;
Castillo, Gonzalo;
Matthias, Bryan

Publication type:

Article

Evaluating the Role of Boat Electrofishing in Fish Monitoring of the Sacramento-San Joaquin Delta.

Published in:

San Francisco Estuary & Watershed Science, 2021, v. 19, n. 1, p. 1, doi. 10.15447/sfews.2021v19iss1art4

By:

McKenzie, Ryan;
Mahardja, Brian

Publication type:

Article

Introduction of Bluefin Killifish Lucania goodei into the Sacramento-San Joaquin Delta.

Published in:

San Francisco Estuary & Watershed Science, 2020, v. 18, n. 2, p. 1, doi. 10.15447/sfews.2020v18iss2art3

By:

Mahardja, Brian;
Goodman, Andrew;
Goodbla, Alisha;
Schreier, Andrea D.;
Johnston, Catherine;
Fuller, Rebecca C.;
Contreras, Dave;
McMartin, Louanne

Publication type:

Article

An Open Data Framework for the San Francisco Estuary.

Published in:

San Francisco Estuary & Watershed Science, 2020, v. 18, n. 2, p. 1, doi. 10.15447/sfews.2020v18iss2art1

By:

Baerwald, Melinda R.;
Davis, Brittany E.;
Lesmeister, Sarah;
Mahardja, Brian;
Pisor, Rachel;
Rinde, Jenna;
Schreier, Brian;
Tobias, Vanessa

Publication type:

Article

Abundance Trends, Distribution, and Habitat Associations of the Invasive Mississippi Silverside (Menidia audens) in the Sacramento-San Joaquin Delta, California, USA.

Published in:

San Francisco Estuary & Watershed Science, 2016, v. 14, n. 1, p. 1, doi. 10.15447/sfews.2016v14iss1art2

By:

Mahardja, Brian;
Conrad, J. Louise;
Lusher, Lester;
Schreier, Brian M.

Publication type:

Article

Resistance and resilience of pelagic and littoral fishes to drought in the San Francisco Estuary.

Published in:

Ecological Applications, 2021, v. 31, n. 2, p. 1, doi. 10.1002/eap.2243

By:

Mahardja, Brian;
Tobias, Vanessa;
Khanna, Shruti;
Mitchell, Lara;
Lehman, Peggy;
Sommer, Ted;
Brown, Larry;
Culberson, Steve;
Conrad, J. Louise

Publication type:

Article

Evaluating top‐down, bottom‐up, and environmental drivers of pelagic food web dynamics along an estuarine gradient.

Published in:

Ecology, 2024, v. 105, n. 4, p. 1, doi. 10.1002/ecy.4274

By:

Rogers, Tanya L.;
Bashevkin, Samuel M.;
Burdi, Christina E.;
Colombano, Denise D.;
Dudley, Peter N.;
Mahardja, Brian;
Mitchell, Lara;
Perry, Sarah;
Saffarinia, Parsa

Publication type:

Article

CRISPR‐based environmental DNA detection for a rare endangered estuarine species.

Published in:

Environmental DNA, 2024, v. 6, n. 1, p. 1, doi. 10.1002/edn3.506

By:

Nagarajan, Raman P.;
Sanders, Leigh;
Kolm, Natalie;
Perez, Alejandro;
Senegal, Taylor;
Mahardja, Brian;
Baerwald, Melinda R.;
Schreier, Andrea D.

Publication type:

Article

Inter-population differences in salinity tolerance of adult wild Sacramento splittail: osmoregulatory and metabolic responses to salinity.

Published in:

Conservation Physiology, 2020, v. 8, n. 1, p. 1, doi. 10.1093/conphys/coaa098

By:

Verhille, Christine E;
Dabruzzi, Theresa F;
Cocherell, Dennis E;
Mahardja, Brian;
Feyrer, Fred;
Foin, Theodore C;
Baerwald, Melinda R;
Fangue, Nann A

Publication type:

Article

Inter-population differences in salinity tolerance and osmoregulation of juvenile wild and hatchery-born Sacramento splittail.

Published in:

Conservation Physiology, 2016, v. 4, p. 1, doi. 10.1093/conphys/cov063

By:

Verhille, Christine E.;
Dabruzzi, Theresa F.;
Cocherell, Dennis E.;
Mahardja, Brian;
Feyrer, Frederick;
Foin, Theodore C.;
Baerwald, Melinda R.;
Fangue, Nann A.

Publication type:

Article

Inter-population differences in salinity tolerance and osmoregulation of juvenile wild and hatchery-born Sacramento splittail.

Published in:

Conservation Physiology, 2016, v. 4, n. 1, p. 1, doi. 10.1093/conphys/cov063

By:

Verhille, Christine E.;
Dabruzzi, Theresa F.;
Cocherell, Dennis E.;
Mahardja, Brian;
Feyrer, Frederick;
Foin, Theodore C.;
Baerwald, Melinda R.;
Fangue, Nann A.

Publication type:

Article

Community Patterns and Environmental Associations for the Early Life Stages of Fishes in a Highly Transformed Estuary.

Published in:

Estuaries & Coasts, 2023, v. 46, n. 2, p. 562, doi. 10.1007/s12237-022-01139-w

By:

Castillo, Gonzalo C.;
Tempel, Trishelle;
Slater, Steven B.;
Mahardja, Brian;
Gilbert, Morgan D.

Publication type:

Article