Works by Magis, Andrew T.

Results: 26

Correction to: Small Molecule KRAS Agonist for Mutant KRAS Cancer Therapy.

Published in:

2020

By:

Xu, Ke;
Park, Dongkyoo;
Magis, Andrew T.;
Zhang, Jun;
Zhou, Wei;
Sica, Gabriel L.;
Ramalingam, Suresh S.;
Curran, Walter J.;
Deng, Xingming

Publication type:

Correction Notice

The geometry of clinical labs and wellness states from deeply phenotyped humans.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23849-8

By:

Zimmer, Anat;
Korem, Yael;
Rappaport, Noa;
Wilmanski, Tomasz;
Baloni, Priyanka;
Jade, Kathleen;
Robinson, Max;
Magis, Andrew T.;
Lovejoy, Jennifer;
Gibbons, Sean M.;
Hood, Leroy;
Price, Nathan D.

Publication type:

Article

Characteristics and Factors Associated With Coronavirus Disease 2019 Infection, Hospitalization, and Mortality Across Race and Ethnicity.

Published in:

Clinical Infectious Diseases, 2021, v. 73, n. 12, p. 2193, doi. 10.1093/cid/ciab154

By:

Dai, Chengzhen L;
Kornilov, Sergey A;
Roper, Ryan T;
Cohen-Cline, Hannah;
Jade, Kathleen;
Smith, Brett;
Heath, James R;
Diaz, George;
Goldman, Jason D;
Magis, Andrew T;
Hadlock, Jennifer J

Publication type:

Article

DUOX2 variants associate with preclinical disturbances in microbiota-immune homeostasis and increased inflammatory bowel disease risk.

Published in:

Journal of Clinical Investigation, 2021, v. 131, n. 9, p. 1, doi. 10.1172/jci141676

By:

Grasberger, Helmut;
Magis, Andrew T.;
Sheng, Elisa;
Conomos, Matthew P.;
Min Zhang;
Garzotto, Lea S.;
Guoqing Hou;
Bishu, Shrinivas;
Hiroko Nagao-Kitamoto;
El-Zaatari, Mohamad;
Sho Kitamoto;
Nobuhiko Kamada;
Stidham, Ryan W.;
Yasutada Akiba;
Kaunitz, Jonathan;
Haberman, Yael;
Kugathasan, Subra;
Denson, Lee A.;
Omenn, Gilbert S.;
Kao, John Y.

Publication type:

Article

Targeting Mcl-1 enhances DNA replication stress sensitivity to cancer therapy.

Published in:

2018

By:

Guo Chen;
Magis, Andrew T.;
Ke Xu;
Dongkyoo Park;
Yu, David S.;
Owonikoko, Taofeek K.;
Sica, Gabriel L.;
Satola, Sarah W.;
Ramalingam, Suresh S.;
Curran, Walter J.;
Doetsch, Paul W.;
Xingming Deng;
Chen, Guo;
Xu, Ke;
Park, Dongkyoo;
Deng, Xingming

Publication type:

journal article

Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational speedup.

Published in:

Bioinformatics, 2011, v. 27, n. 6, p. 872, doi. 10.1093/bioinformatics/btr033

By:

Magis, Andrew T.;
Earls, John C.;
Ko, Youn-Hee;
Eddy, James A.;
Price, Nathan D.

Publication type:

Article

Sulfatide Preserves Insulin Crystals Not by Being Integrated in the Lattice but by Stabilizing Their Surface.

Published in:

Journal of Diabetes Research, 2016, p. 1, doi. 10.1155/2016/6179635

By:

Buschard, Karsten;
Bracey, Austin W.;
McElroy, Daniel L.;
Magis, Andrew T.;
Osterbye, Thomas;
Atkinson, Mark A.;
Bailey, Kate M.;
Posgai, Amanda L.;
Ostrov, David A.

Publication type:

Article

Discovery of Small Molecule Bak Activator for Lung Cancer Therapy.

Published in:

Theranostics, 2021, v. 11, n. 17, p. 8500, doi. 10.7150/thno.60349

By:

Dongkyoo Park;
Anisuzzaman, Abu Syed Md;
Magis, Andrew T.;
Guo Chen;
Maohua Xie;
Guojing Zhang;
Behera, Madhusmita;
Sica, Gabriel L.;
Ramalingam, Suresh S.;
Owonikoko, Taofeek K.;
Xingming Deng

Publication type:

Article

Small-molecule Bax agonists for cancer therapy.

Published in:

Nature Communications, 2014, v. 5, n. 9, p. 4935, doi. 10.1038/ncomms5935

By:

Xin, Meiguo;
Li, Rui;
Xie, Maohua;
Park, Dongkyoo;
Owonikoko, Taofeek K.;
Sica, Gabriel L.;
Corsino, Patrick E.;
Zhou, Jia;
Ding, Chunyong;
White, Mark A.;
Magis, Andrew T.;
Ramalingam, Suresh S.;
Curran, Walter J.;
Khuri, Fadlo R.;
Deng, Xingming

Publication type:

Article

AUREA: an open-source software system for accurate and user-friendly identification of relative expression molecular signatures.

Published in:

BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-78

By:

Earls, John C.;
Eddy, James A.;
Funk, Cory C.;
Ko, Younhee;
Magis, Andrew T.;
Price, Nathan D.

Publication type:

Article

The top-scoring 'N' algorithm: a generalized relative expression classification method from small numbers of biomolecules.

Published in:

BMC Bioinformatics, 2012, v. 13, n. 1, p. 227, doi. 10.1186/1471-2105-13-227

By:

Magis, Andrew T.;
Price, Nathan D.

Publication type:

Article

Small Molecule KRAS Agonist for Mutant KRAS Cancer Therapy.

Published in:

Molecular Cancer, 2019, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12943-019-1012-4

By:

Xu, Ke;
Park, Dongkyoo;
Magis, Andrew T.;
Zhang, Jun;
Zhou, Wei;
Sica, Gabriel L.;
Ramalingam, Suresh S.;
Curran, Walter J.;
Deng, Xingming

Publication type:

Article

Multi-study Integration of Brain Cancer Transcriptomes Reveals Organ-Level Molecular Signatures.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 7, p. 1, doi. 10.1371/journal.pcbi.1003148

By:

Sung, Jaeyun;
Kim, Pan-Jun;
Ma, Shuyi;
Funk, Cory C.;
Magis, Andrew T.;
Wang, Yuliang;
Hood, Leroy;
Geman, Donald;
Price, Nathan D.

Publication type:

Article

Plasma levels of soluble ACE2are associated with sex, Metabolic Syndrome, and its biomarkers in a large cohort, pointing to a possible mechanism for increased severity in COVID-19.

Published in:

2020

By:

Kornilov, Sergey A.;
Lucas, Isabelle;
Jade, Kathleen;
Dai, Chengzhen L.;
Lovejoy, Jennifer C.;
Magis, Andrew T.

Publication type:

Letter

Untargeted longitudinal analysis of a wellness cohort identifies markers of metastatic cancer years prior to diagnosis.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-73451-z

By:

Magis, Andrew T.;
Rappaport, Noa;
Conomos, Matthew P.;
Omenn, Gilbert S.;
Lovejoy, Jennifer C.;
Hood, Leroy;
Price, Nathan D.

Publication type:

Article

Health and disease markers correlate with gut microbiome composition across thousands of people.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18871-1

By:

Manor, Ohad;
Dai, Chengzhen L.;
Kornilov, Sergey A.;
Smith, Brett;
Price, Nathan D.;
Lovejoy, Jennifer C.;
Gibbons, Sean M.;
Magis, Andrew T.

Publication type:

Article

Measuring the Effect of Inter-Study Variability on Estimating Prediction Error.

Published in:

PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0110840

By:

Ma, Shuyi;
Sung, Jaeyun;
Magis, Andrew T.;
Wang, Yuliang;
Geman, Donald;
Price, Nathan D.

Publication type:

Article

Manifestations of Alzheimer's disease genetic risk in the blood are evident in a multiomic analysis in healthy adults aged 18 to 90.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-09825-2

By:

Heath, Laura;
Earls, John C.;
Magis, Andrew T.;
Kornilov, Sergey A.;
Lovejoy, Jennifer C.;
Funk, Cory C.;
Rappaport, Noa;
Logsdon, Benjamin A.;
Mangravite, Lara M.;
Kunkle, Brian W.;
Martin, Eden R.;
Naj, Adam C.;
Ertekin-Taner, Nilüfer;
Golde, Todd E.;
Hood, Leroy;
Price, Nathan D.;
Alzheimer's Disease Genetics Consortium;
Abner, Erin;
Adams, Perrie M.;
Albert, Marilyn S.

Publication type:

Article

P2‐141: THE MANIFESTATION OF GENETIC RISK FOR ALZHEIMER'S DISEASE IN BLOOD ACROSS ADULTHOOD: A MULTI‐OMIC PHENOME‐WIDE ASSOCIATION STUDY (PHEWAS) APPROACH.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2019, v. 15, p. P627, doi. 10.1016/j.jalz.2019.06.2548

By:

Heath, Laura M.;
Earls, John C.;
Magis, Andrew T.;
Kornilov, Sergey A.;
Hood, Leroy;
Lovejoy, Jennifer C.;
Price, Nathan D.

Publication type:

Article

P2‐123: A PHENOME‐WIDE ASSOCIATION STUDY (PHEWAS) OF BLOOD‐BASED BIOLOGICAL MARKERS AND APOLIPOPROTEIN E GENOTYPE ACROSS THE ADULT LIFESPAN.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2018, v. 14, p. P716, doi. 10.1016/j.jalz.2018.06.809

By:

Heath, Laura M.;
Earls, John C.;
Magis, Andrew T.;
Conomos, Matthew P.;
Rohwer, Jesse E.;
Hood, Lee;
Lovejoy, Jennifer C.;
Price, Nathan D.

Publication type:

Article

Multi-Omic Biological Age Estimation and Its Correlation With Wellness and Disease Phenotypes: A Longitudinal Study of 3,558 Individuals.

Published in:

2019

By:

Earls, John C;
Rappaport, Noa;
Heath, Laura;
Wilmanski, Tomasz;
Magis, Andrew T;
Schork, Nicholas J;
Omenn, Gilbert S;
Lovejoy, Jennifer;
Hood, Leroy;
Price, Nathan D

Publication type:

journal article

Reply to "Precision medicine in the clouds".

Published in:

2022

By:

Magis, Andrew T;
Earls, John C;
Glusman, Gustavo;
Omenn, Gilbert S;
Lovejoy, Jennifer C;
Price, Nathan D;
Hood, Leroy

Publication type:

Letter

Integrated analysis of plasma and single immune cells uncovers metabolic changes in individuals with COVID-19.

Published in:

Nature Biotechnology, 2022, v. 40, n. 1, p. 110, doi. 10.1038/s41587-021-01020-4

By:

Lee, Jihoon W.;
Su, Yapeng;
Baloni, Priyanka;
Chen, Daniel;
Pavlovitch-Bedzyk, Ana Jimena;
Yuan, Dan;
Duvvuri, Venkata R.;
Ng, Rachel H.;
Choi, Jongchan;
Xie, Jingyi;
Zhang, Rongyu;
Murray, Kim;
Kornilov, Sergey;
Smith, Brett;
Magis, Andrew T.;
Hoon, Dave S. B.;
Hadlock, Jennifer J.;
Goldman, Jason D.;
Price, Nathan D.;
Gottardo, Raphael

Publication type:

Article

Blood metabolome predicts gut microbiome α-diversity in humans.

Published in:

Nature Biotechnology, 2019, v. 37, n. 10, p. 1217, doi. 10.1038/s41587-019-0233-9

By:

Wilmanski, Tomasz;
Rappaport, Noa;
Earls, John C.;
Magis, Andrew T.;
Manor, Ohad;
Lovejoy, Jennifer;
Omenn, Gilbert S.;
Hood, Leroy;
Gibbons, Sean M.;
Price, Nathan D.

Publication type:

Article

Reply to "Precision medicine in the clouds".

Published in:

2018

By:

Magis, Andrew T;
Earls, John C;
Glusman, Gustavo;
Omenn, Gilbert S;
Lovejoy, Jennifer C;
Price, Nathan D;
Hood, Leroy

Publication type:

Letter

A wellness study of 108 individuals using personal, dense, dynamic data clouds.

Published in:

Nature Biotechnology, 2017, v. 35, n. 8, p. 747, doi. 10.1038/nbt.3870

By:

Price, Nathan D;
Magis, Andrew T;
Earls, John C;
Glusman, Gustavo;
Levy, Roie;
Lausted, Christopher;
McDonald, Daniel T;
Kusebauch, Ulrike;
Moss, Christopher L;
Zhou, Yong;
Qin, Shizhen;
Moritz, Robert L;
Brogaard, Kristin;
Omenn, Gilbert S;
Lovejoy, Jennifer C;
Hood, Leroy

Publication type:

Article