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A metabolic network-based approach for developing feeding strategies for CHO cells to increase monoclonal antibody production.
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- Bioprocess & Biosystems Engineering, 2020, v. 43, n. 8, p. 1381, doi. 10.1007/s00449-020-02332-6
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- Article
Evolution of 'Ligand-Diffusion Chreodes' on Protein-Surface Models: A Genetic-Algorithm Study.
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- Chemistry & Biodiversity, 2007, v. 4, n. 12, p. 2766, doi. 10.1002/cbdv.200790225
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- Article
RT-DOb, a switch gene for the gene pair {Csf1r, Milr1}, can influence the onset of Alzheimer's disease by regulating communication between mast cell and microglia.
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- PLoS ONE, 2023, v. 18, n. 7, p. 1, doi. 10.1371/journal.pone.0288134
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Discovering missing reactions of metabolic networks by using gene co-expression data.
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- Scientific Reports, 2017, p. 41774, doi. 10.1038/srep41774
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- Article
A network biology approach to understanding the importance of chameleon proteins in human physiology and pathology.
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- Amino Acids, 2017, v. 49, n. 2, p. 303, doi. 10.1007/s00726-016-2361-6
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- Article
Rituximab in the Treatment of Epidermolysis Bullosa Acquisita: A Systematic Review.
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- Journal of Clinical & Aesthetic Dermatology, 2024, v. 17, n. 7, p. 24
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- Article
Structural systems pharmacology: A framework for integrating metabolic network and structure-based virtual screening for drug discovery against bacteria.
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- PLoS ONE, 2021, v. 16, n. 12, p. 1, doi. 10.1371/journal.pone.0261267
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FFCA: a feasibility-based method for flux coupling analysis of metabolic networks.
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- BMC Bioinformatics, 2011, v. 12, n. 1, p. 236, doi. 10.1186/1471-2105-12-236
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- Article
Impact of residue accessible surface area on the prediction of protein secondary structures.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-357
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- Article
A tale of two symmetrical tails: Structural and functional characteristics of palindromes in proteins.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-274
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- Article
On the Role of Oxygen and Glucose in Bone Marrow-Derived Mesenchymal Stem Cell Proliferation.
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- Advanced Biomedical Research, 2023, v. 12, n. 5, p. 1, doi. 10.4103/abr.abr_308_22
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- Article
A meta-analysis of gene expression data highlights synaptic dysfunction in the hippocampus of brains with Alzheimer's disease.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-64452-z
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- Article
A reconciliation of genome-scale metabolic network model of Zymomonas mobilis ZM4.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-64721-x
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Impact of hfq and sigE on the tolerance of Zymomonas mobilis ZM4 to furfural and acetic acid stresses.
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- PLoS ONE, 2020, v. 15, n. 10, p. 1, doi. 10.1371/journal.pone.0240330
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- Article
Rps27a might act as a controller of microglia activation in triggering neurodegenerative diseases.
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- PLoS ONE, 2020, v. 15, n. 9, p. 1, doi. 10.1371/journal.pone.0239219
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Engineering a Novel Metabolic Pathway for Improving Cellular Malonyl-CoA Levels in Escherichia coli.
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- Molecular Biotechnology, 2023, v. 65, n. 9, p. 1508, doi. 10.1007/s12033-022-00635-5
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- Article
AmiR-P<sup>3</sup>: An AI-based microRNA prediction pipeline in plants.
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- PLoS ONE, 2024, v. 19, n. 8, p. 1, doi. 10.1371/journal.pone.0308016
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- Article
A kidney-specific genome-scale metabolic network model for analyzing focal segmental glomerulosclerosis.
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- Mammalian Genome, 2016, v. 27, n. 3/4, p. 158, doi. 10.1007/s00335-016-9622-2
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- Article
Using machine learning to study the effect of medication adherence in Opioid Use Disorder.
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- PLoS ONE, 2022, v. 17, n. 12, p. 1, doi. 10.1371/journal.pone.0278988
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- Article
Genome-scale metabolic model-based engineering of Escherichia coli enhances recombinant single-chain antibody fragment production.
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- Biotechnology Letters, 2022, v. 44, n. 10, p. 1231, doi. 10.1007/s10529-022-03301-7
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- Article
Systematically gap-filling the genome-scale metabolic model of CHO cells.
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- Biotechnology Letters, 2021, v. 43, n. 1, p. 73, doi. 10.1007/s10529-020-03021-w
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Finding elementary flux modes in metabolic networks based on flux balance analysis and flux coupling analysis: application to the analysis of Escherichia coli metabolism.
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- Biotechnology Letters, 2013, v. 35, n. 12, p. 2039, doi. 10.1007/s10529-013-1328-x
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Targeting gut-microbiota for gastric cancer treatment: a systematic review.
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- Frontiers in Medicine, 2024, p. 1, doi. 10.3389/fmed.2024.1412709
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- Article
The metabolic network model of primed/naive human embryonic stem cells underlines the importance of oxidation-reduction potential and tryptophan metabolism in primed pluripotency.
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- Cell & Bioscience, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1186/s13578-019-0334-7
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The association between physical activity and hospital payments for acute admissions in the Australian population aged 45 and over.
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- PLoS ONE, 2019, v. 14, n. 6, p. 1, doi. 10.1371/journal.pone.0218394
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A genome-scale metabolic network reconstruction of extremely halophilic bacterium Salinibacter ruber.
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- PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0216336
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- Article
On correlated reaction sets and coupled reaction sets in metabolic networks.
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- Journal of Bioinformatics & Computational Biology, 2015, v. 13, n. 4, p. -1, doi. 10.1142/S0219720015710031
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- Article
FCDECOMP: Decomposition of metabolic networks based on flux coupling relations.
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- Journal of Bioinformatics & Computational Biology, 2014, v. 12, n. 5, p. -1, doi. 10.1142/S0219720014500280
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- Article
SL-scan identifies synthetic lethal interactions in cancer using metabolic networks.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-42992-4
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- Article
Beyond Taxonomic Analysis of Microbiomes: A Functional Approach for Revisiting Microbiome Changes in Colorectal Cancer.
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- Frontiers in Microbiology, 2020, v. 10, p. 1, doi. 10.3389/fmicb.2019.03117
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Three-way interaction model to trace the mechanisms involved in Alzheimer’s disease transgenic mice.
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- PLoS ONE, 2017, v. 12, n. 9, p. 1, doi. 10.1371/journal.pone.0184697
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- Article
Modeling the Differences in Biochemical Capabilities of Pseudomonas Species by Flux Balance Analysis: How Good Are Genome-Scale Metabolic Networks at Predicting the Differences?
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- Scientific World Journal, 2014, p. 1, doi. 10.1155/2014/416289
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- Article
Studying the Relationship between Robustness against Mutations in Metabolic Networks and Lifestyle of Organisms.
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- Scientific World Journal, 2013, p. 1, doi. 10.1155/2013/615697
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- Article