Works by Luo, Guan-Zheng

Results: 25

Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-60447-4

By:

Xie, Ying-Yuan;
Zhong, Zhen-Dong;
Chen, Hong-Xuan;
Ren, Ze-Hui;
Qiu, Yuan-Tao;
Lan, Ye-Lin;
Wu, Fu;
Kong, Jin-Wen;
Luo, Ru-Jia;
Zhang, Delong;
Liu, Biao-Di;
Shu, Yang;
Yin, Feng;
Wu, Jian;
Li, Zigang;
Zhang, Zhang;
Luo, Guan-Zheng

Publication type:

Article

ISRNA: an integrative online toolkit for short reads from high-throughput sequencing data.

Published in:

Bioinformatics, 2014, v. 30, n. 3, p. 434, doi. 10.1093/bioinformatics/btt678

By:

Luo, Guan-Zheng;
Yang, Wei;
Ma, Ying-Ke;
Wang, Xiu-Jie

Publication type:

Article

Antibiotic‐Induced Gut Microbiota Dysbiosis Modulates Host Transcriptome and m6A Epitranscriptome via Bile Acid Metabolism.

Published in:

Advanced Science, 2024, v. 11, n. 28, p. 1, doi. 10.1002/advs.202307981

By:

Yang, Meng;
Zheng, Xiaoqi;
Fan, Jiajun;
Cheng, Wei;
Yan, Tong‐Meng;
Lai, Yushan;
Zhang, Nianping;
Lu, Yi;
Qi, Jiali;
Huo, Zhengyi;
Xu, Zihe;
Huang, Jia;
Jiao, Yuting;
Liu, Biaodi;
Pang, Rui;
Zhong, Xiang;
Huang, Shi;
Luo, Guan‐Zheng;
Lee, Gina;
Jobin, Christian

Publication type:

Article

Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-727

By:

Luo, Guan-Zheng;
Hafner, Markus;
Zhimin Shi;
Brown, Miguel;
Feng, Gui-Hai;
Tuschl, Thomas;
Wang, Xiu-Jie;
XiaoChing LI

Publication type:

Article

High-precision mapping reveals rare N6-deoxyadenosine methylation in the mammalian genome.

Published in:

Cell Discovery, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41421-022-00484-1

By:

Chen, Li-Qian;
Zhang, Zhang;
Chen, Hong-Xuan;
Xi, Jian-Fei;
Liu, Xue-Hong;
Ma, Dong-Zhao;
Zhong, Yu-Hao;
Ng, Wen Hui;
Chen, Tao;
Mak, Daniel W.;
Chen, Qi;
Chen, Yao-Qing;
Luo, Guan-Zheng

Publication type:

Article

Systematic comparison of tools used for m6A mapping from nanopore direct RNA sequencing.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-37596-5

By:

Zhong, Zhen-Dong;
Xie, Ying-Yuan;
Chen, Hong-Xuan;
Lan, Ye-Lin;
Liu, Xue-Hong;
Ji, Jing-Yun;
Wu, Fu;
Jin, Lingmei;
Chen, Jiekai;
Mak, Daniel W.;
Zhang, Zhang;
Luo, Guan-Zheng

Publication type:

Article

Co-effects of m6A and chromatin accessibility dynamics in the regulation of cardiomyocyte differentiation.

Published in:

Epigenetics & Chromatin, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13072-023-00506-6

By:

Liu, Xue-Hong;
Liu, Zhun;
Ren, Ze-Hui;
Chen, Hong-Xuan;
Zhang, Ying;
Zhang, Zhang;
Cao, Nan;
Luo, Guan-Zheng

Publication type:

Article

Systematic identification of CRISPR off-target effects by CROss-seq.

Published in:

Protein & Cell, 2023, v. 14, n. 4, p. 299, doi. 10.1093/procel/pwac018

By:

Li, Yan;
Zhi, Shengyao;
Wu, Tong;
Chen, Hong-Xuan;
Kang, Rui;
Ma, Dong-Zhao;
Songyang, Zhou;
He, Chuan;
Liang, Puping;
Luo, Guan-Zheng

Publication type:

Article

Ubiquitously expressed genes participate in cell-specific functions via alternative promoter usage.

Published in:

EMBO Reports, 2016, v. 17, n. 9, p. 1304, doi. 10.15252/embr.201541476

By:

Feng, Guihai;
Tong, Man;
Xia, Baolong;
Luo, Guan‐Zheng;
Wang, Meng;
Xie, Dongfang;
Wan, Haifeng;
Zhang, Ying;
Zhou, Qi;
Wang, Xiu‐Jie

Publication type:

Article

Discovery and Accurate Detection of Rare Nucleic Acid Modifications.

Published in:

Israel Journal of Chemistry, 2024, v. 64, n. 5, p. 1, doi. 10.1002/ijch.202400024

By:

Luo, Ru‐Jia;
Chen, Hong‐Xuan;
Kong, Jin‐Wen;
Zhang, Zhang;
Ayoub, Nabieh;
Luo, Guan‐Zheng

Publication type:

Article

Crystal structure of the yeast heterodimeric ADAT2/3 deaminase.

Published in:

BMC Biology, 2020, v. 18, n. 1, p. N.PAG, doi. 10.1186/s12915-020-00920-2

By:

Liu, Xiwen;
Chen, Ruoyu;
Sun, Yujie;
Chen, Ran;
Zhou, Jie;
Tian, Qingnan;
Tao, Xuan;
Zhang, Zhang;
Luo, Guan-zheng;
Xie, Wei

Publication type:

Article

Targeted RNA N6‐Methyladenosine Demethylation Controls Cell Fate Transition in Human Pluripotent Stem Cells.

Published in:

Advanced Science, 2021, v. 8, n. 11, p. 1, doi. 10.1002/advs.202003902

By:

Chen, Xuena;
Zhao, Qingquan;
Zhao, Yu‐Li;
Chai, Guo‐Shi;
Cheng, Weisheng;
Zhao, Zhiju;
Wang, Jia;
Luo, Guan‐Zheng;
Cao, Nan

Publication type:

Article

N 6-methyladenosine modifications stabilize phosphate starvation response–related mRNAs in plant adaptation to nutrient-deficient stress.

Published in:

Nature Communications, 2025, v. 15, n. 1, p. 1, doi. 10.1038/s41467-025-59331-y

By:

Liu, Kai;
Wang, Xiaojia;
Wang, Jingyi;
Wang, Shuman;
Bai, Haiyan;
Dong, Weiguo;
Qiao, Lulu;
Jin, Qiongli;
Zhang, Zhonghui;
Luo, Guan-Zheng;
Wang, Zhiye

Publication type:

Article

N6-methyldeoxyadenosine directs nucleosome positioning in Tetrahymena DNA.

Published in:

Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1573-3

By:

Luo, Guan-Zheng;
Hao, Ziyang;
Luo, Liangzhi;
Shen, Mingren;
Sparvoli, Daniela;
Zheng, Yuqing;
Zhang, Zijie;
Weng, Xiaocheng;
Chen, Kai;
Cui, Qiang;
Turkewitz, Aaron P.;
He, Chuan

Publication type:

Article

Identification of a small molecule 1,4-bis-[4-(3-phenoxy-propoxy)-but-2-ynyl]-piperazine as a novel inhibitor of the transcription factor p53.

Published in:

Acta Pharmacologica Sinica, 2013, v. 34, n. 6, p. 805, doi. 10.1038/aps.2013.61

By:

Liu, Xin;
Zhang, Ying;
Tong, Man;
Liu, Xiu-ying;
Luo, Guan-zheng;
Xie, Dong-fang;
Ren, Shao-fang;
Bai, Dong-hui;
Wang, Liu;
Zhou, Qi;
Wang, Xiu-jie

Publication type:

Article

A KDPG sensor RccR governs Pseudomonas aeruginosa carbon metabolism and aminoglycoside antibiotic tolerance.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 2, p. 967, doi. 10.1093/nar/gkad1201

By:

Wang, Yujue;
Wang, Zhipeng;
Chen, Weizhong;
Ren, Ze-Hui;
Gao, Hui;
Dai, Jiani;
Luo, Guan-Zheng;
Wu, Zhaowei;
Ji, Quanjiang

Publication type:

Article

Retraction: Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.

Published in:

Nature Communications, 2017, v. 8, n. 2, p. 14331, doi. 10.1038/ncomms14331

By:

Ji, Quanjiang;
Chen, Peter J.;
Qin, Guangrong;
Deng, Xin;
Hao, Ziyang;
Wawrzak, Zdzislaw;
Yeo, Won-sik;
Quang, Jenny Winjing;
Cho, Hoonsik;
Luo, Guan-Zheng;
Weng, Xiaocheng;
You, Qiancheng;
Luan, Chi-Hao;
Yang, Xiaojing;
Bae, Taeok;
Yu, Kunqian;
Jiang, Hualiang;
He, Chuan

Publication type:

Article

Abundant DNA 6mA methylation during early embryogenesis of zebrafish and pig.

Published in:

Nature Communications, 2016, v. 7, n. 10, p. 13052, doi. 10.1038/ncomms13052

By:

Liu, Jianzhao;
Zhu, Yuanxiang;
Luo, Guan-Zheng;
Wang, Xinxia;
Yue, Yanan;
Wang, Xiaona;
Zong, Xin;
Chen, Kai;
Yin, Hang;
Fu, Ye;
Han, Dali;
Wang, Yizhen;
Chen, Dahua;
He, Chuan

Publication type:

Article

Characterization of eukaryotic DNA N6-methyladenine by a highly sensitive restriction enzyme-assisted sequencing.

Published in:

Nature Communications, 2016, v. 7, n. 4, p. 11301, doi. 10.1038/ncomms11301

By:

Luo, Guan-Zheng;
Wang, Fang;
Weng, Xiaocheng;
Chen, Kai;
Hao, Ziyang;
Yu, Miao;
Deng, Xin;
Liu, Jianzhao;
He, Chuan

Publication type:

Article

Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.

Published in:

Nature Communications, 2016, v. 7, n. 3, p. 11000, doi. 10.1038/ncomms11000

By:

Ji, Quanjiang;
Chen, Peter J.;
Qin, Guangrong;
Deng, Xin;
Hao, Ziyang;
Wawrzak, Zdzislaw;
Yeo, Won-Sik;
Quang, Jenny Winjing;
Cho, Hoonsik;
Luo, Guan-Zheng;
Weng, Xiaocheng;
You, Qiancheng;
Luan, Chi-Hao;
Yang, Xiaojing;
Bae, Taeok;
Yu, Kunqian;
Jiang, Hualiang;
He, Chuan

Publication type:

Article

Unique features of the m6A methylome in Arabidopsis thaliana.

Published in:

Nature Communications, 2014, v. 5, n. 11, p. 5630, doi. 10.1038/ncomms6630

By:

Luo, Guan-Zheng;
MacQueen, Alice;
Zheng, Guanqun;
Duan, Hongchao;
Dore, Louis C.;
Lu, Zhike;
Liu, Jun;
Chen, Kai;
Jia, Guifang;
Bergelson, Joy;
He, Chuan

Publication type:

Article

Parthenogenetic haploid embryonic stem cells produce fertile mice.

Published in:

Cell Research, 2013, v. 23, n. 11, p. 1330, doi. 10.1038/cr.2013.126

By:

Wan, Haifeng;
He, Zhengquan;
Dong, Mingzhu;
Gu, Tiantian;
Luo, Guan-Zheng;
Teng, Fei;
Xia, Baolong;
Li, Wei;
Feng, Chunjing;
Li, Xin;
Li, Tianda;
Shuai, Ling;
Fu, Rui;
Wang, Liu;
Wang, Xiu-Jie;
Zhao, Xiao-Yang;
Zhou, Qi

Publication type:

Article

Androgenetic haploid embryonic stem cells produce live transgenic mice.

Published in:

Nature, 2012, v. 490, n. 7420, p. 407, doi. 10.1038/nature11435

By:

Li, Wei;
Shuai, Ling;
Wan, Haifeng;
Dong, Mingzhu;
Wang, Meng;
Sang, Lisi;
Feng, Chunjing;
Luo, Guan-Zheng;
Li, Tianda;
Li, Xin;
Wang, Libin;
Zheng, Qin-Yuan;
Sheng, Chao;
Wu, Hua-Jun;
Liu, Zhonghua;
Liu, Lei;
Wang, Liu;
Wang, Xiu-Jie;
Zhao, Xiao-Yang;
Zhou, Qi

Publication type:

Article

DNA N6-methyladenine: a new epigenetic mark in eukaryotes?

Published in:

Nature Reviews Molecular Cell Biology, 2015, v. 16, n. 12, p. 705, doi. 10.1038/nrm4076

By:

Luo, Guan-Zheng;
Blanco, Mario Andres;
Greer, Eric Lieberman;
He, Chuan;
Shi, Yang

Publication type:

Article

High-Resolution N6-Methyladenosine (m6A) Map Using Photo-Crosslinking-Assisted m6A Sequencing.

Published in:

Angewandte Chemie International Edition, 2015, v. 54, n. 5, p. 1587, doi. 10.1002/anie.201410647

By:

Chen, Kai;
Lu, Zhike;
Wang, Xiao;
Fu, Ye;
Luo, Guan-Zheng;
Han, Dali;
Dominissini, Dan;
Dai, Qing;
He, Chuan;
Liu, Nian;
Pan, Tao

Publication type:

Article

Works by Luo, Guan-Zheng

Single-molecule direct RNA sequencing reveals the shaping of epitranscriptome across multiple species.

ISRNA: an integrative online toolkit for short reads from high-throughput sequencing data.

Antibiotic‐Induced Gut Microbiota Dysbiosis Modulates Host Transcriptome and m<sup>6</sup>A Epitranscriptome via Bile Acid Metabolism.

Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression.

High-precision mapping reveals rare N<sup>6</sup>-deoxyadenosine methylation in the mammalian genome.

Systematic comparison of tools used for m<sup>6</sup>A mapping from nanopore direct RNA sequencing.

Co-effects of m6A and chromatin accessibility dynamics in the regulation of cardiomyocyte differentiation.

Systematic identification of CRISPR off-target effects by CROss-seq.

Ubiquitously expressed genes participate in cell-specific functions via alternative promoter usage.

Discovery and Accurate Detection of Rare Nucleic Acid Modifications.

Crystal structure of the yeast heterodimeric ADAT2/3 deaminase.

Targeted RNA N<sup>6</sup>‐Methyladenosine Demethylation Controls Cell Fate Transition in Human Pluripotent Stem Cells.

N <sup>6</sup>-methyladenosine modifications stabilize phosphate starvation response–related mRNAs in plant adaptation to nutrient-deficient stress.

N<sup>6</sup>-methyldeoxyadenosine directs nucleosome positioning in Tetrahymena DNA.

Identification of a small molecule 1,4-bis-[4-(3-phenoxy-propoxy)-but-2-ynyl]-piperazine as a novel inhibitor of the transcription factor p53.

A KDPG sensor RccR governs Pseudomonas aeruginosa carbon metabolism and aminoglycoside antibiotic tolerance.

Retraction: Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.

Abundant DNA 6mA methylation during early embryogenesis of zebrafish and pig.

Characterization of eukaryotic DNA N<sup>6</sup>-methyladenine by a highly sensitive restriction enzyme-assisted sequencing.

Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus.

Unique features of the m<sup>6</sup>A methylome in Arabidopsis thaliana.

Parthenogenetic haploid embryonic stem cells produce fertile mice.

Androgenetic haploid embryonic stem cells produce live transgenic mice.

DNA N<sup>6</sup>-methyladenine: a new epigenetic mark in eukaryotes?

High-Resolution N<sup>6</sup>-Methyladenosine (m<sup>6</sup>A) Map Using Photo-Crosslinking-Assisted m<sup>6</sup>A Sequencing.