Works by Luisi, Ben F.

Results: 48

Hfq and its constellation of RNA.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 8, p. 578, doi. 10.1038/nrmicro2615

By:

Vogel, Jörg;
Luisi, Ben F.

Publication type:

Article

Structural basis for human mitochondrial tRNA maturation.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49132-0

By:

Meynier, Vincent;
Hardwick, Steven W.;
Catala, Marjorie;
Roske, Johann J.;
Oerum, Stephanie;
Chirgadze, Dimitri Y.;
Barraud, Pierre;
Yue, Wyatt W.;
Luisi, Ben F.;
Tisné, Carine

Publication type:

Article

Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.

Published in:

Nature, 2005, v. 437, n. 7062, p. 1187, doi. 10.1038/nature04084

By:

Callaghan, Anastasia J.;
Marcaida, Maria Jose;
Stead, Jonathan A.;
McDowall, Kenneth J.;
Scott, William G.;
Luisi, Ben F.

Publication type:

Article

Recognition of the 70S ribosome and polysome by the RNA degradosome in Escherichia coli.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 20, p. 10417, doi. 10.1093/nar/gks739

By:

Tsai, Yi-Chun;
Du, Dijun;
Domínguez-Malfavón, Lilianha;
Dimastrogiovanni, Daniela;
Cross, Jonathan;
Callaghan, Anastasia J.;
García-Mena, Jaime;
Luisi, Ben F.

Publication type:

Article

Identification and classification of bacterial Type III toxin–antitoxin systems encoded in chromosomal and plasmid genomes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 13, p. 6158, doi. 10.1093/nar/gks231

By:

Blower, Tim R.;
Short, Francesca L.;
Rao, Feng;
Mizuguchi, Kenji;
Pei, Xue Y.;
Fineran, Peter C.;
Luisi, Ben F.;
Salmond, George P. C.

Publication type:

Article

An RNA degradosome assembly in Caulobacter crescentus.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 4, p. 1449, doi. 10.1093/nar/gkq928

By:

Hardwick, Steven W.;
Chan, Vivian S. Y.;
Broadhurst, R. William;
Luisi, Ben F.

Publication type:

Article

Structure and efflux mechanism of the yeast pleiotropic drug resistance transporter Pdr5.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25574-8

By:

Harris, Andrzej;
Wagner, Manuel;
Du, Dijun;
Raschka, Stefanie;
Nentwig, Lea-Marie;
Gohlke, Holger;
Smits, Sander H. J.;
Luisi, Ben F.;
Schmitt, Lutz

Publication type:

Article

Flipping and other astonishing transporter dance moves in fungal drug resistance.

Published in:

BioEssays, 2022, v. 44, n. 7, p. 1, doi. 10.1002/bies.202200035

By:

Raschka, Stefanie L.;
Harris, Andrzej;
Luisi, Ben F.;
Schmitt, Lutz

Publication type:

Article

Identity Determinants of the Translocation Signal for a Type 1 Secretion System.

Published in:

Frontiers in Physiology, 2022, v. 13, p. 1, doi. 10.3389/fphys.2021.804646

By:

Spitz, Olivia;
Erenburg, Isabelle N.;
Kanonenberg, Kerstin;
Peherstorfer, Sandra;
Lenders, Michael H. H.;
Reiners, Jens;
Ma, Miao;
Luisi, Ben F.;
Smits, Sander H. J.;
Schmitt, Lutz

Publication type:

Article

Viral interference of the bacterial RNA metabolism machinery.

Published in:

RNA Biology, 2017, v. 14, n. 1, p. 6, doi. 10.1080/15476286.2016.1251003

By:

Dendooven, Tom;
Van den Bossche, An;
Hendrix, Hanne;
Ceyssens, Pieter-Jan;
Voet, Marleen;
Bandyra, K. J.;
De Maeyer, Marc;
Aertsen, Abram;
Noben, Jean-Paul;
Hardwick, Steven W.;
Luisi, Ben F.;
Lavigne, Rob

Publication type:

Article

Unconventional interactions between water and heterocyclic nitrogens in protein structures.

Published in:

Proteins, 2004, v. 57, n. 1, p. 1, doi. 10.1002/prot.20216

By:

Stollar, Elliott J.;
Gelpí, Jose Luis;
Velankar, Sameer;
Golovin, Adel;
Orozco, Modesto;
Luisi, Ben F.

Publication type:

Article

Membrane Recognition and Dynamics of the RNA Degradosome.

Published in:

PLoS Genetics, 2015, v. 11, n. 2, p. 1, doi. 10.1371/journal.pgen.1004961

By:

Strahl, Henrik;
Turlan, Catherine;
Khalid, Syma;
Bond, Peter J.;
Kebalo, Jean-Marie;
Peyron, Pascale;
Poljak, Leonora;
Bouvier, Marie;
Hamoen, Leendert;
Luisi, Ben F.;
Carpousis, Agamemnon J.

Publication type:

Article

The pseudo-atomic structure of an RND-type tripartite multidrug efflux pump.

Published in:

Biological Chemistry, 2015, v. 396, n. 9/10, p. 1073, doi. 10.1515/hsz-2015-0118

By:

Dijun Du;
Voss, Jarrod;
Zhao Wang;
Wah Chiu;
Luisi, Ben F.

Publication type:

Article

A Model for Allosteric Communication in Drug Transport by the AcrAB-TolC Tripartite Efflux Pump.

Published in:

Antibiotics (2079-6382), 2022, v. 11, n. 1, p. 52, doi. 10.3390/antibiotics11010052

By:

Webber, Anya;
Ratnaweera, Malitha;
Harris, Andrzej;
Luisi, Ben F.;
Ntsogo Enguéné, Véronique Yvette

Publication type:

Article

The function and structure of the metal coordination sites within the glucocorticoid receptor DNA binding domain.

Published in:

Nature, 1988, v. 334, n. 6182, p. 543, doi. 10.1038/334543a0

By:

Freedman, Leonard P.;
Luisi, Ben F.;
Korszun, Z. Richard;
Basavappa, Ravi;
Sigler, Paul B.;
Yamamoto, Keith R.

Publication type:

Article

The decrotonylase FoSir5 facilitates mitochondrial metabolic state switching in conidial germination of Fusarium oxysporum.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.75583

By:

Ning Zhang;
Limin Song;
Yang Xu;
Xueyuan Pei;
Luisi, Ben F.;
Wenxing Liang

Publication type:

Article

Catabolite repression control protein antagonist, a novel player in Pseudomonas aeruginosa carbon catabolite repression control.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1195558

By:

Sonnleitner, Elisabeth;
Bassani, Flavia;
Sesso, Anastasia Cianciulli;
Brear, Paul;
Lilic, Branislav;
Davidovski, Lovro;
Resch, Armin;
Luisi, Ben F.;
Moll, Isabella;
Bläsi, Udo

Publication type:

Article

Translational regulation by Hfq–Crc assemblies emerges from polymorphic ribonucleoprotein folding.

Published in:

EMBO Journal, 2023, v. 42, n. 3, p. 1, doi. 10.15252/embj.2022111129

By:

Dendooven, Tom;
Sonnleitner, Elisabeth;
Bläsi, Udo;
Luisi, Ben F

Publication type:

Article

Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.

Published in:

EMBO Journal, 2023, v. 42, n. 2, p. 1, doi. 10.15252/embj.2022112574

By:

Islam, Md Saiful;
Hardwick, Steven W;
Quell, Laura;
Durica‐Mitic, Svetlana;
Chirgadze, Dimitri Y;
Görke, Boris;
Luisi, Ben F

Publication type:

Article

On the mechanism of DNA binding by nuclear hormone receptors: A structural and functional perspective.

Published in:

Journal of Cellular Biochemistry, 1993, v. 51, n. 2, p. 140, doi. 10.1002/jcb.240510205

By:

Freedman, Leonard P.;
Luisi, Ben F.

Publication type:

Article

An ancient anion-binding structural module in RNA and DNA helicases.

Published in:

Proteins, 2010, v. 78, n. 8, p. 1900, doi. 10.1002/prot.22704

By:

Milner-White, E. James;
Pietras, Zbigniew;
Luisi, Ben F.

Publication type:

Article

A potential molecular switch in an α-helical coiled coil.

Published in:

Proteins, 2009, v. 75, n. 1, p. 272, doi. 10.1002/prot.22351

By:

Laughton, Charles A.;
Luisi, Ben F.;
Pratap, J. Venkatesh;
Calladine, Chris R.

Publication type:

Article

A potential molecular switch in an α-helical coiled coil.

Published in:

Proteins, 2008, v. 70, n. 1, p. 25, doi. 10.1002/prot.21596

By:

Laughton, Charles A.;
Luisi, Ben F.;
Pratap, J. Venkatesh;
Calladine, Chris R.

Publication type:

Article

Molecular biology for green recovery—A call for action.

Published in:

PLoS Biology, 2022, v. 20, n. 4, p. 1, doi. 10.1371/journal.pbio.3001623

By:

Rodríguez-Martínez, Marta;
Nielsen, Jens;
Dupont, Sam;
Vamathevan, Jessica;
Glover, Beverley J.;
Crosswell, Lindsey C.;
Rouse, Brendan;
Luisi, Ben F.;
Bowler, Chris;
Gasser, Susan M.;
Arendt, Detlev;
Erb, Tobias J.;
de Lorenzo, Victor;
Heard, Edith;
Patil, Kiran Raosaheb

Publication type:

Article

Allosteric mutants show that PrfA activation is dispensable for vacuole escape but required for efficient spread and Listeria survival in vivo.

Published in:

Molecular Microbiology, 2012, v. 85, n. 3, p. 461, doi. 10.1111/j.1365-2958.2012.08121.x

By:

Deshayes, Caroline;
Bielecka, Magdalena K.;
Cain, Robert J.;
Scortti, Mariela;
de las Heras, Aitor;
Pietras, Zbigniew;
Luisi, Ben F.;
Núñez Miguel, Ricardo;
Vázquez-Boland, José A.

Publication type:

Article

The RNase E of Escherichia coli is a membrane-binding protein.

Published in:

Molecular Microbiology, 2008, v. 70, n. 4, p. 799, doi. 10.1111/j.1365-2958.2008.06454.x

By:

Khemici, Vanessa;
Poljak, Leonora;
Luisi, Ben F.;
Carpousis, Agamemnon J.

Publication type:

Article

The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization.

Published in:

Nature Communications, 2017, v. 8, n. 7, p. 16018, doi. 10.1038/ncomms16018

By:

Alam, Mohammad Tauqeer;
Olin-Sandoval, Viridiana;
Stincone, Anna;
Keller, Markus A.;
Zelezniak, Aleksej;
Luisi, Ben F.;
Ralser, Markus

Publication type:

Article

Transcriptome-scale analysis uncovers conserved residues in the hydrophobic core of the bacterial RNA chaperone Hfq required for small regulatory RNA stability.

Published in:

Nucleic Acids Research, 2025, v. 53, n. 3, p. 1, doi. 10.1093/nar/gkaf019

By:

McQuail, Josh;
Krepl, Miroslav;
Katsuya-Gaviria, Kai;
Tabib-Salazar, Aline;
Burchell, Lynn;
Bischler, Thorsten;
Gräfenhan, Tom;
Brear, Paul;
Šponer, Jiří;
Luisi, Ben F;
Wigneshweraraj, Sivaramesh

Publication type:

Article

Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 15, p. 9161, doi. 10.1093/nar/gkae455

By:

Bandyra, Katarzyna J;
Fröhlich, Kathrin S;
Vogel, Jörg;
Rodnina, Marina;
Goyal, Akanksha;
Luisi, Ben F

Publication type:

Article

Analysis of the natively unstructured RNA/protein-recognition core in the Escherichia coli RNA degradosome and its interactions with regulatory RNA/Hfq complexes.

Published in:

Nucleic Acids Research, 2018, v. 46, n. 1, p. 387, doi. 10.1093/nar/gkx1083

By:

Bruce, Heather A;
Du, Dijun;
Matak-Vinkovic, Dijana;
Bandyra, Katarzyna J;
Broadhurst, R William;
Martin, Esther;
Sobott, Frank;
Shkumatov, Alexander V;
Luisi, Ben F

Publication type:

Article

Structural insights into RapZ-mediated regulation of bacterial amino-sugar metabolism.

Published in:

Nucleic Acids Research, 2017, v. 45, n. 18, p. 10845, doi. 10.1093/nar/gkx732

By:

Gonzalez, Grecia M.;
Durica-Mitic, Svetlana;
Hardwick, Steven W.;
Moncrieffe, Martin C.;
Resch, Marcus;
Neumann, Piotr;
Ficner, Ralf;
Görke, Boris;
Luisi, Ben F.

Publication type:

Article

Co-evolution of quaternary organization and novel RNA tertiary interactions revealed in the crystal structure of a bacterial protein-RNA toxin-antitoxin system.

Published in:

Nucleic Acids Research, 2015, v. 43, n. 19, p. 9529, doi. 10.1093/nar/gkv868

By:

Feng Rao;
Short, Francesca L.;
Voss, Jarrod E.;
Blower, Tim R.;
Orme, Anastasia L.;
Whittaker, Tom E.;
Luisi, Ben F.;
Salmond, George P. C.

Publication type:

Article

Linkage of catalysis and 5′ end recognition in ribonuclease RNase J.

Published in:

Nucleic Acids Research, 2015, v. 43, n. 16, p. 8066, doi. 10.1093/nar/gkv732

By:

Xue-Yuan Pei;
Bralley, Patricia;
Jones, George H.;
Luisi, Ben F.

Publication type:

Article

Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 21, p. 13294, doi. 10.1093/nar/gku1134

By:

Voss, Jarrod E.;
Luisi, Ben F.;
Hardwick, Steven W.

Publication type:

Article

From conformational chaos to robust regulation: the structure and function of the multi-enzyme RNA degradosome.

Published in:

Quarterly Reviews of Biophysics, 2012, v. 45, n. 2, p. 105, doi. 10.1017/S003358351100014X

By:

Górna, Maria W.;
Carpousis, Agamemnon J.;
Luisi, Ben F.

Publication type:

Article

A processed noncoding RNA regulates an altruistic bacterial antiviral system.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 2, p. 185, doi. 10.1038/nsmb.1981

By:

Blower, Tim R.;
Pei, Xue Y.;
Short, Francesca L.;
Fineran, Peter C.;
Humphreys, David P.;
Luisi, Ben F.;
Salmond, George P. C.

Publication type:

Article

1.8 Å resolution crystal structure of the carbapenem intrinsic resistance protein CarF.

Published in:

Acta Crystallographica: Section D, Structural Biology, 2017, v. 73, n. 7, p. 549, doi. 10.1107/S2059798317002236

By:

Tichy, Evelyn M.;
Hardwick, Steven W.;
Luisi, Ben F.;
Salmond, George P. C.

Publication type:

Article

Acetylation of a fungal effector that translocates host PR1 facilitates virulence.

Published in:

eLife, 2022, p. 1, doi. 10.7554/eLife.82628

By:

Jingtao Li;
Xiaoying Ma;
Chenyang Wang;
Sihui Liu;
Gang Yu;
Mingming Gao;
Hengwei Qian;
Mengjie Liu;
Luisi, Ben F.;
Gabriel, Dean W.;
Wenxing Liang

Publication type:

Article

Licensing and due process in the turnover of bacterial RNA.

Published in:

RNA Biology, 2013, v. 10, n. 4, p. 627, doi. 10.4161/rna.24393

By:

Bandyra, Katarzyna J.;
Luisi, Ben F.

Publication type:

Article

Rarely at rest.

Published in:

RNA Biology, 2013, v. 10, n. 1, p. 1

By:

Hardwick, Steven W.;
Luisi, Ben F.

Publication type:

Article

5-Formylcytosine alters the structure of the DNA double helix.

Published in:

Nature Structural & Molecular Biology, 2015, v. 22, n. 1, p. 44, doi. 10.1038/nsmb.2936

By:

Raiber, Eun-Ang;
Murat, Pierre;
Chirgadze, Dimitri Y;
Beraldi, Dario;
Luisi, Ben F;
Balasubramanian, Shankar

Publication type:

Article

Structure of the AcrAB-TolC multidrug efflux pump.

Published in:

Nature, 2014, v. 509, n. 7501, p. 512, doi. 10.1038/nature13205

By:

Du, Dijun;
Wang, Zhao;
James, Nathan R.;
Voss, Jarrod E.;
Klimont, Ewa;
Ohene-Agyei, Thelma;
Venter, Henrietta;
Chiu, Wah;
Luisi, Ben F.

Publication type:

Article

An allosteric transport mechanism for the AcrAB-TolC multidrug efflux pump.

Published in:

eLife, 2017, p. 1, doi. 10.7554/eLife.24905

By:

Zhao Wang;
Guizhen Fan;
Hryc, Corey F.;
Blaza, James N.;
Serysheva, Irina I.;
Schmid, Michael F.;
Wah Chiu;
Luisi, Ben F.;
Dijun Du

Publication type:

Article

Structural elucidation of a novel mechanism for the bacteriophage-based inhibition of the RNA degradosome.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.16413

By:

Van den Bossche, An;
Hardwick, Steven W.;
Ceyssens, Pieter-Jan;
Hendrix, Hanne;
Voet, Marleen;
Dendooven, Tom;
Bandyra, Katarzyna J.;
De Maeyer, Marc;
Aertsen, Abram;
Noben, Jean-Paul;
Luisi, Ben F.;
Lavigne, Rob

Publication type:

Article

Multi‐scale ensemble properties of the Escherichia coli RNA degradosome.

Published in:

Molecular Microbiology, 2022, v. 117, n. 1, p. 102, doi. 10.1111/mmi.14800

By:

Dendooven, Tom;
Paris, Giulia;
Shkumatov, Alexander V.;
Islam, Md. Saiful;
Burt, Alister;
Kubańska, Marta A.;
Yang, Tai Yuchen;
Hardwick, Steven W.;
Luisi, Ben F.

Publication type:

Article

In situ structure and assembly of the multidrug efflux pump AcrAB-TolC.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-10512-6

By:

Shi, Xiaodong;
Chen, Muyuan;
Yu, Zhili;
Bell, James M.;
Wang, Hans;
Forrester, Isaac;
Villarreal, Heather;
Jakana, Joanita;
Du, Dijun;
Luisi, Ben F.;
Ludtke, Steven J.;
Wang, Zhao

Publication type:

Article

RNA search engines empower the bacterial intranet.

Published in:

Biochemical Society Transactions, 2017, v. 45, n. 4, p. 987, doi. 10.1042/BST20160373

By:

Dendooven, Tom;
Luisi, Ben F.

Publication type:

Article

Maturation of 6S regulatory RNA to a highly elongated structure.

Published in:

FEBS Journal, 2015, v. 282, n. 23, p. 4548, doi. 10.1111/febs.13516

By:

Fadouloglou, Vasiliki E.;
Lin, Hong‐Tin V.;
Tria, Giancarlo;
Hernández, Helena;
Robinson, Carol V.;
Svergun, Dmitri I.;
Luisi, Ben F.

Publication type:

Article