Works by Lozupone, Catherine A.

Results: 48
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    Widespread colonization of the lung by Tropheryma whipplei in HIV infection.

    Published in:
    2013
    By:
    • Lozupone, Catherine;
    • Cota-Gomez, Adela;
    • Palmer, Brent E;
    • Linderman, Derek J;
    • Charlson, Emily S;
    • Sodergren, Erica;
    • Mitreva, Makedonka;
    • Abubucker, Sahar;
    • Martin, John;
    • Yao, Guohui;
    • Campbell, Thomas B;
    • Flores, Sonia C;
    • Ackerman, Gail;
    • Stombaugh, Jesse;
    • Ursell, Luke;
    • Beck, James M;
    • Curtis, Jeffrey L;
    • Young, Vincent B;
    • Lynch, Susan V;
    • Huang, Laurence
    Publication type:
    journal article
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    Widespread Colonization of the Lung by Tropheryma whipplei in HIV Infection.

    Published in:
    American Journal of Respiratory & Critical Care Medicine, 2013, v. 187, n. 10, p. 1110, doi. 10.1164/rccm.201211-2145oc
    By:
    • Lozupone, Catherine;
    • Cota-Gomez, Adela;
    • Palmer, Brent E.;
    • Linderman, Derek J.;
    • Charlson, Emily S.;
    • Sodergren, Erica;
    • Mitreva, Makedonka;
    • Abubucker, Sahar;
    • Martin, John;
    • Guohui Yao;
    • Campbell, Thomas B.;
    • Flores, Sonia C.;
    • Ackerman, Gail;
    • Stombaugh, Jesse;
    • Ursell, Luke;
    • Beck, James M.;
    • Curtis, Jeffrey L.;
    • Young, Vincent B.;
    • Lynch, Susan V.;
    • Huang, Laurence
    Publication type:
    Article
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    Human gut microbiome viewed across age and geography.

    Published in:
    Nature, 2012, v. 486, n. 7402, p. 222, doi. 10.1038/nature11053
    By:
    • Yatsunenko, Tanya;
    • Rey, Federico E.;
    • Manary, Mark J.;
    • Trehan, Indi;
    • Dominguez-Bello, Maria Gloria;
    • Contreras, Monica;
    • Magris, Magda;
    • Hidalgo, Glida;
    • Baldassano, Robert N.;
    • Anokhin, Andrey P.;
    • Heath, Andrew C.;
    • Warner, Barbara;
    • Reeder, Jens;
    • Kuczynski, Justin;
    • Caporaso, J. Gregory;
    • Lozupone, Catherine A.;
    • Lauber, Christian;
    • Clemente, Jose Carlos;
    • Knights, Dan;
    • Knight, Rob
    Publication type:
    Article
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    The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins.

    Published in:
    Science Translational Medicine, 2011, v. 3, n. 106, p. 1, doi. 10.1126/scitranslmed.3002701
    By:
    • Yatsunenko, Tanya;
    • Hsiao, Ansel;
    • Faith, Jeremiah J.;
    • Muegge, Brian D.;
    • Goodman, Andrew L.;
    • Henrissat, Bernard;
    • Oozeer, Raish;
    • Cools-Portier, Stéphanie;
    • Gobert, Guillaume;
    • Chervaux, Christian;
    • Knights, Dan;
    • Lozupone, Catherine A.;
    • Knight, Rob;
    • Duncan, Alexis E.;
    • Bain, James R.;
    • Muehlbauer, Michael J.;
    • Newgard, Christopher B.;
    • Heath, Andrew C.;
    • Gordon, Jeffrey I.
    Publication type:
    Article
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    Gut microbiota from high-risk men who have sex with men drive immune activation in gnotobiotic mice and in vitro HIV infection.

    Published in:
    PLoS Pathogens, 2019, v. 15, n. 4, p. 1, doi. 10.1371/journal.ppat.1007611
    By:
    • Li, Sam X.;
    • Sen, Sharon;
    • Schneider, Jennifer M.;
    • Xiong, Ka-Na;
    • Nusbacher, Nichole M.;
    • Moreno-Huizar, Nancy;
    • Shaffer, Michael;
    • Armstrong, Abigail J. S.;
    • Severs, Erin;
    • Kuhn, Kristine;
    • Neff, Charles P.;
    • McCarter, Martin;
    • Campbell, Thomas;
    • Lozupone, Catherine A.;
    • Palmer, Brent E.
    Publication type:
    Article
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    Intestinal microbial communities and Holdemanella isolated from HIV+/− men who have sex with men increase frequencies of lamina propria CCR5<sup>+</sup> CD4<sup>+</sup> T cells.

    Published in:
    Gut Microbes, 2021, v. 13, n. 1, p. 1, doi. 10.1080/19490976.2021.1997292
    By:
    • Yamada, Eiko;
    • Martin, Casey G.;
    • Moreno-Huizar, Nancy;
    • Fouquier, Jennifer;
    • Neff, C. Preston;
    • Coleman, Sara L.;
    • Schneider, Jennifer M.;
    • Huber, Jonathan;
    • Nusbacher, Nichole M.;
    • McCarter, Martin;
    • Campbell, Thomas B.;
    • Lozupone, Catherine A.;
    • Palmer, Brent E.
    Publication type:
    Article
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    HIV-induced alteration in gut microbiota.

    Published in:
    Gut Microbes, 2014, v. 5, n. 4, p. 1, doi. 10.4161/gmic.32132
    By:
    • Lozupone, Catherine A.;
    • Rhodes, Matthew E.;
    • Neff, Charles P.;
    • Fontenot, Andrew P.;
    • Campbell, Thomas B.;
    • Palmer, Brent E.
    Publication type:
    Article
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    Global patterns in the biogeography of bacterial taxa.

    Published in:
    Environmental Microbiology, 2011, v. 13, n. 1, p. 135, doi. 10.1111/j.1462-2920.2010.02315.x
    By:
    • Nemergut, Diana R.;
    • Costello, Elizabeth K.;
    • Hamady, Micah;
    • Lozupone, Catherine;
    • Jiang, Lin;
    • Schmidt, Steven K.;
    • Fierer, Noah;
    • Townsend, Alan R.;
    • Cleveland, Cory C.;
    • Stanish, Lee;
    • Knight, Rob
    Publication type:
    Article
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    Gut microbiota phenotypes of obesity.

    Published in:
    NPJ Biofilms & Microbiomes, 2019, v. 5, n. 1, p. N.PAG, doi. 10.1038/s41522-019-0091-8
    By:
    • Stanislawski, Maggie A.;
    • Dabelea, Dana;
    • Lange, Leslie A.;
    • Wagner, Brandie D.;
    • Lozupone, Catherine A.
    Publication type:
    Article
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    Circulating CD8<sup>+</sup> mucosal‐associated invariant T cells correlate with improved treatment responses and overall survival in anti‐PD‐1‐treated melanoma patients.

    Published in:
    Clinical & Translational Immunology, 2022, v. 11, n. 1, p. 1, doi. 10.1002/cti2.1367
    By:
    • Vorwald, Victoria M;
    • Davis, Dana M;
    • Van Gulick, Robert J;
    • Torphy, Robert J;
    • Borgers, Jessica SW;
    • Klarquist, Jared;
    • Couts, Kasey L;
    • Amato, Carol M;
    • Cogswell, Dasha T;
    • Fujita, Mayumi;
    • Castleman, Moriah J;
    • Davis, Timothy;
    • Lozupone, Catherine;
    • Medina, Theresa M;
    • Robinson, William A;
    • Gapin, Laurent;
    • McCarter, Martin D;
    • Tobin, Richard P
    Publication type:
    Article
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    Microbiome, Metabolism, and Immunoregulation of Asthma: An American Thoracic Society and National Institute of Allergy and Infectious Diseases Workshop Report.

    Published in:
    American Journal of Respiratory Cell & Molecular Biology, 2022, v. 67, n. 2, p. 155, doi. 10.1165/rcmb.2022-0216ST
    By:
    • Kozik, Ariangela J.;
    • Holguin, Fernando;
    • Segal, Leopoldo N.;
    • Chatila, Talal A.;
    • Dixon, Anne E.;
    • Gern, James E.;
    • Lozupone, Catherine;
    • Lukacs, Nicholas;
    • Lumeng, Carey;
    • Molyneaux, Philip L.;
    • Reisdorph, Nichole;
    • Vujkovic-Cvijin, Ivan;
    • Togias, Alkis;
    • Huang, Yvonne J.
    Publication type:
    Article
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    An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men.

    Published in:
    Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0580-7
    By:
    • Armstrong, Abigail J. S.;
    • Shaffer, Michael;
    • Nusbacher, Nichole M.;
    • Griesmer, Christine;
    • Fiorillo, Suzanne;
    • Schneider, Jennifer M.;
    • Preston Neff, C.;
    • Li, Sam X.;
    • Fontenot, Andrew P.;
    • Campbell, Thomas;
    • Palmer, Brent E.;
    • Lozupone, Catherine A.
    Publication type:
    Article
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    Correlation detection strategies in microbial data sets vary widely in sensitivity and precision.

    Published in:
    ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 7, p. 1669, doi. 10.1038/ismej.2015.235
    By:
    • Weiss, Sophie;
    • Van Treuren, Will;
    • Lozupone, Catherine;
    • Faust, Karoline;
    • Friedman, Jonathan;
    • Deng, Ye;
    • Xia, Li Charlie;
    • Xu, Zhenjiang Zech;
    • Ursell, Luke;
    • Alm, Eric J;
    • Birmingham, Amanda;
    • Cram, Jacob A;
    • Fuhrman, Jed A;
    • Raes, Jeroen;
    • Sun, Fengzhu;
    • Zhou, Jizhong;
    • Knight, Rob
    Publication type:
    Article
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    QIIME allows analysis of high-throughput community sequencing data.

    Published in:
    2010
    By:
    • Caporaso, J. Gregory;
    • Kuczynski, Justin;
    • Stombaugh, Jesse;
    • Bittinger, Kyle;
    • Bushman, Frederic D.;
    • Costello, Elizabeth K.;
    • Fierer, Noah;
    • Peña, Antonio Gonzalez;
    • Goodrich, Julia K.;
    • Gordon, Jeffrey I.;
    • Huttley, Gavin A.;
    • Kelley, Scott T.;
    • Knights, Dan;
    • Koenig, Jeremy E.;
    • Ley, Ruth E.;
    • Lozupone, Catherine A.;
    • McDonald, Daniel;
    • Muegge, Brian D.;
    • Pirrung, Meg;
    • Reeder, Jens
    Publication type:
    Letter