Works by Lombardot, Thierry

Results: 14

Megx.net—database resources for marine ecological genomics.

Published in:

Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d390, doi. 10.1093/nar/gkj070

By:

Lombardot, Thierry;
Kottmann, Renzo;
Pfeffer, Hauke;
Richter, Michael;
Teeling, Hanno;
Quast, Christian;
Glöckner, Frank Oliver

Publication type:

Article

Archaea-Like Genes for C<sub>1</sub>-Transfer EnzymesinPlanctomycetes: Phylogenetic Implications of Their Unexpected Presence in This Phylum.

Published in:

Journal of Molecular Evolution, 2004, v. 59, n. 5, p. 571, doi. 10.1007/s00239-004-2643-6

By:

Bauer, Margarete;
Lombardot, Thierry;
Teeling, Hanno;
Ward, Naomi L.;
Amann, Rudolf I.;
Gl&oumlckner, Frank O.

Publication type:

Article

Genome and proteome characterization of the psychrophilic Flavobacterium bacteriophage 11b.

Published in:

Extremophiles, 2007, v. 11, n. 1, p. 95, doi. 10.1007/s00792-006-0014-5

By:

Borriss, Michael;
Lombardot, Thierry;
Glöckner, Frank Oliver;
Becher, Dörte;
Albrecht, Dirk;
Schweder, Thomas

Publication type:

Article

Whole genome analysis of the marine Bacteroidetes‘ Gramella forsetii’ reveals adaptations to degradation of polymeric organic matter.

Published in:

Environmental Microbiology, 2006, v. 8, n. 12, p. 2201, doi. 10.1111/j.1462-2920.2006.01152.x

By:

Bauer, Margarete;
Kube, Michael;
Teeling, Hanno;
Richter, Michael;
Lombardot, Thierry;
Allers, Elke;
Würdemann, Chris A.;
Quast, Christian;
Kuhl, Heiner;
Knaust, Florian;
Woebken, Dagmar;
Bischof, Kerstin;
Mussmann, Marc;
Choudhuri, Jomuna V.;
Meyer, Folker;
Reinhardt, Richard;
Amann, Rudolf I.;
Glöckner, Frank Oliver

Publication type:

Article

Insights into the genomes of archaea mediating the anaerobic oxidation of methane.

Published in:

Environmental Microbiology, 2005, v. 7, n. 12, p. 1937, doi. 10.1111/j.1462-2920.2005.00844.x

By:

Meyerdierks, Anke;
Kube, Michael;
Lombardot, Thierry;
Knittel, Katrin;
Bauer, Margarete;
Glöckner, Frank Oliver;
Reinhardt, Richard;
Amann, Rudolf

Publication type:

Article

JCoast -- A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes.

Published in:

2008

By:

Richter, Michael;
Lombardot, Thierry;
Kostadinov, Ivaylo;
Kottmann, Renzo;
Duhaime, Melissa Beth;
Peplies, Jörg;
Glöckner, Frank Oliver

Publication type:

Product Review

Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1<sup>T</sup>.

Published in:

Proteomics, 2008, v. 8, n. 8, p. 1608, doi. 10.1002/pmic.200701017

By:

Hieu, Cao Xuan;
Voigt, Birgit;
Albrecht, Dirk;
Becher, Dörte;
Lombardot, Thierry;
Glöckner, Frank Oliver;
Amann, Rudolf;
Hecker, Michael;
Schweder, Thomas

Publication type:

Article

Towards the proteome of the marine bacterium Rhodopirellula baltica: Mapping the soluble proteins.

Published in:

Proteomics, 2005, v. 5, n. 14, p. 3654, doi. 10.1002/pmic.200401201

By:

Dörte Gade;
Dorothea Theiss;
Daniela Lange;
Ekaterina Mirgorodskaya;
Thierry Lombardot;
Frank Oliver Glöckner;
Michael Kube;
Richard Reinhardt;
Rudolf Amann;
Hans Lehrach;
Ralf Rabus;
Johan Gobom

Publication type:

Article

Enzyme annotation in UniProtKB using Rhea.

Published in:

Bioinformatics, 2020, v. 36, n. 6, p. 1896, doi. 10.1093/bioinformatics/btz817

By:

Morgat, Anne;
Lombardot, Thierry;
Coudert, Elisabeth;
Axelsen, Kristian;
Neto, Teresa Batista;
Gehant, Sebastien;
Bansal, Parit;
Bolleman, Jerven;
Gasteiger, Elisabeth;
Castro, Edouard de;
Baratin, Delphine;
Pozzato, Monica;
Xenarios, Ioannis;
Poux, Sylvain;
Redaschi, Nicole;
Bridge, Alan;
Consortium, The UniProt

Publication type:

Article

Diverse Taxonomies for Diverse Chemistries: Enhanced Representation of Natural Product Metabolism in UniProtKB.

Published in:

Metabolites (2218-1989), 2021, v. 11, n. 1, p. 48, doi. 10.3390/metabo11010048

By:

Feuermann, Marc;
Boutet, Emmanuel;
Morgat, Anne;
Axelsen, Kristian B.;
Bansal, Parit;
Bolleman, Jerven;
de Castro, Edouard;
Coudert, Elisabeth;
Gasteiger, Elisabeth;
Géhant, Sébastien;
Lieberherr, Damien;
Lombardot, Thierry;
Neto, Teresa B.;
Pedruzzi, Ivo;
Poux, Sylvain;
Pozzato, Monica;
Redaschi, Nicole;
Bridge, Alan

Publication type:

Article

Updates in Rhea: SPARQLing biochemical reaction data.

Published in:

Nucleic Acids Research, 2019, v. 47, n. D1, p. D596, doi. 10.1093/nar/gky876

By:

Lombardot, Thierry;
Morgat, Anne;
Axelsen, Kristian B;
Aimo, Lucila;
Hyka-Nouspikel, Nevila;
Niknejad, Anne;
Ignatchenko, Alex;
Xenarios, Ioannis;
Coudert, Elisabeth;
Redaschi, Nicole;
Bridge, Alan

Publication type:

Article

Updates in Rhea -- an expert curated resource of biochemical reactions.

Published in:

Nucleic Acids Research, 2017, v. 45, n. D1, p. D415, doi. 10.1093/nar/gkw990

By:

Morgat, Anne;
Lombardot, Thierry;
Axelsen, Kristian B.;
Aimo, Lucila;
Niknejad, Anne;
Hyka-Nouspikel, Nevila;
Coudert, Elisabeth;
Pozzato, Monica;
Pagni, Marco;
Moretti, Sébastien;
Rosanoff, Steven;
Onwubiko, Joseph;
Bougueleret, Lydie;
Xenarios, Ioannis;
Redaschi, Nicole;
Bridge, Alan

Publication type:

Article

Updates in Rhea—a manually curated resource of biochemical reactions.

Published in:

Nucleic Acids Research, 2015, v. 43, n. D1, p. D459, doi. 10.1093/nar/gku961

By:

Morgat, Anne;
Axelsen, Kristian B.;
Lombardot, Thierry;
Alcántara, Rafael;
Aimo, Lucila;
Zerara, Mohamed;
Niknejad, Anne;
Belda, Eugeni;
Hyka-Nouspikel, Nevila;
Coudert, Elisabeth;
Redaschi, Nicole;
Bougueleret, Lydie;
Steinbeck, Christoph;
Xenarios, Ioannis;
Bridge, Alan

Publication type:

Article

TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.

Published in:

BMC Bioinformatics, 2004, v. 5, p. 163, doi. 10.1186/1471-2105-5-163

By:

Teeling, Hanno;
Waldmann, Jost;
Lombardot, Thierry;
Bauer, Margarete;
Glöckner, Frank Oliver

Publication type:

Article