Works by Llamas, Bastien
Results: 46
Filtering out the noise: metagenomic classifiers optimize ancient DNA mapping.
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- Briefings in Bioinformatics, 2025, v. 26, n. 1, p. 1, doi. 10.1093/bib/bbae646
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- Article
DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification.
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- Investigative Genetics, 2013, v. 4, n. 1, p. 2, doi. 10.1186/2041-2223-4-26
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- Article
Correction: Low-cost cross-taxon enrichment of mitochondrial DNA using in-house synthesised RNA probes.
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- 2019
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- Correction Notice
Low-cost cross-taxon enrichment of mitochondrial DNA using in-house synthesised RNA probes.
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- PLoS ONE, 2019, v. 14, n. 2, p. 1, doi. 10.1371/journal.pone.0209499
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- Article
Binding affinities of 438 HLA proteins to complete proteomes of seven pandemic viruses and distributions of strongest and weakest HLA peptide binders in populations worldwide.
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- HLA: Immune Response Genetics, 2020, v. 96, n. 3, p. 277, doi. 10.1111/tan.13956
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- Article
Massive migration from the steppe was a source for Indo-European languages in Europe.
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- Nature, 2015, v. 522, n. 7555, p. 207, doi. 10.1038/nature14317
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- Article
Genozip: a universal extensible genomic data compressor.
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- Bioinformatics, 2021, v. 37, n. 16, p. 2225, doi. 10.1093/bioinformatics/btab102
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- Article
genozip: a fast and efficient compression tool for VCF files.
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- Bioinformatics, 2020, v. 36, n. 13, p. 4091, doi. 10.1093/bioinformatics/btaa290
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- Article
From the field to the laboratory: Controlling DNA contamination in human ancient DNA research in the high-throughput sequencing era.
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- Science & Technology of Archaeological Research, 2017, v. 3, n. 1, p. 1, doi. 10.1080/20548923.2016.1258824
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- Article
Exploring the Potential of Genome-Wide Hybridization Capture Enrichment for Forensic DNA Profiling of Degraded Bones.
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- Genes, 2025, v. 16, n. 1, p. 23, doi. 10.3390/genes16010023
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- Article
Human Genetic Research in Wallacea and Sahul: Recent Findings and Future Prospects.
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- Genes, 2022, v. 13, n. 12, p. 2373, doi. 10.3390/genes13122373
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- Article
Mitogenomes Reveal Two Major Influxes of Papuan Ancestry across Wallacea Following the Last Glacial Maximum and Austronesian Contact.
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- Genes, 2021, v. 12, n. 7, p. 965, doi. 10.3390/genes12070965
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- Article
A Multidisciplinary Review of the Inka Imperial Resettlement Policy and Implications for Future Investigations.
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- Genes, 2021, v. 12, n. 2, p. 215, doi. 10.3390/genes12020215
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- Article
Ancient DNA Studies in Pre-Columbian Mesoamerica.
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- Genes, 2020, v. 11, n. 11, p. 1346, doi. 10.3390/genes11111346
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- Article
Shrouded in history: Unveiling the ways of life of an early Muslim population in Santarém, Portugal (8<sup>th</sup>– 10<sup>th</sup> century AD).
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- PLoS ONE, 2024, v. 19, n. 3, p. 1, doi. 10.1371/journal.pone.0299958
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- Article
Individuals with Inflammatory Bowel Disease Have an Altered Gut Microbiome Composition of Fungi and Protozoa.
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- Microorganisms, 2022, v. 10, n. 10, p. 1910, doi. 10.3390/microorganisms10101910
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- Article
Early cave art and ancient DNA record the origin of European bison.
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- Nature Communications, 2016, v. 7, n. 10, p. 13158, doi. 10.1038/ncomms13158
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- Article
Iron Age and Anglo-Saxon genomes from East England reveal British migration history.
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- Nature Communications, 2016, v. 7, n. 1, p. 10408, doi. 10.1038/ncomms10408
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- Article
Ancient DNA from an extinct Mediterranean micromammal—Hypnomys morpheus (Rodentia: Gliridae)—Provides insight into the biogeographic history of insular dormice.
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- Journal of Zoological Systematics & Evolutionary Research, 2020, v. 58, n. 1, p. 427, doi. 10.1111/jzs.12343
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- Article
Ancient DNA Analysis Suggests Negligible Impact of the Wari Empire Expansion in Peru’s Central Coast during the Middle Horizon.
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- PLoS ONE, 2016, v. 11, n. 6, p. 1, doi. 10.1371/journal.pone.0155508
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- Article
A Re-Appraisal of the Early Andean Human Remains from Lauricocha in Peru.
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- PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0127141
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- Article
Systematic benchmark of ancient DNA read mapping.
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- Briefings in Bioinformatics, 2021, v. 22, n. 5, p. 1, doi. 10.1093/bib/bbab076
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- Article
Pleistocene Chinese cave hyenas and the recent Eurasian history of the spotted hyena, Crocuta crocuta.
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- Molecular Ecology, 2014, v. 23, n. 3, p. 522, doi. 10.1111/mec.12576
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- Article
Chromosome Y variants from different inbred mouse strains are linked to differences in the morphologic and molecular responses of cardiac cells to postpubertal testosterone.
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- BMC Genomics, 2009, v. 10, p. 1, doi. 10.1186/1471-2164-10-150
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- Article
Environmental conditions associated with initial northern expansion of anatomically modern humans.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48762-8
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- Article
Cases of trisomy 21 and trisomy 18 among historic and prehistoric individuals discovered from ancient DNA.
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- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-45438-1
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- Article
More than dirt: Sedimentary ancient DNA and Indigenous Australia.
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- Molecular Ecology Resources, 2025, v. 25, n. 2, p. 1, doi. 10.1111/1755-0998.13835
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- Article
Allelic bias when performing in‐solution enrichment of ancient human DNA.
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- Molecular Ecology Resources, 2023, v. 23, n. 8, p. 1823, doi. 10.1111/1755-0998.13869
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- Article
Experimental conditions improving in-solution target enrichment for ancient DNA.
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- Molecular Ecology Resources, 2017, v. 17, n. 3, p. 508, doi. 10.1111/1755-0998.12595
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- Article
Ancient DNA Reconstructs the Genetic Legacies of Precontact Puerto Rico Communities.
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- Molecular Biology & Evolution, 2020, v. 37, n. 3, p. 611, doi. 10.1093/molbev/msz267
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- Article
More Arrows in the Ancient DNA Quiver: Use of Paleoepigenomes and Paleomicrobiomes to Investigate Animal Adaptation to Environment.
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- Molecular Biology & Evolution, 2020, v. 37, n. 2, p. 307, doi. 10.1093/molbev/msz231
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- Article
Late Pleistocene Australian Marsupial DNA Clarifies the Affinities of Extinct Megafaunal Kangaroos and Wallabies.
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- Molecular Biology & Evolution, 2015, v. 32, n. 3, p. 574, doi. 10.1093/molbev/msu338
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- Article
Molecular Phylogeny, Biogeography, and Habitat Preference Evolution of Marsupials.
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- Molecular Biology & Evolution, 2014, v. 31, n. 9, p. 2322, doi. 10.1093/molbev/msu176
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- Article
The immunogenetic impact of European colonization in the Americas.
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- Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.918227
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- Article
Ancient DNA of northern China Hystricidae sub-fossils reveals the evolutionary history of old world porcupines in the Late Pleistocene.
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- BMC Evolutionary Biology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12862-020-01656-x
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- Article
Distinct QTLs are linked to cardiac left ventricular mass in a sex-specific manner in a normotensive inbred rat intercross.
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- Mammalian Genome, 2005, v. 16, n. 9, p. 700, doi. 10.1007/s00335-005-0041-z
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- Article
QTL mapping for traits associated with stress neuroendocrine reactivity in rats.
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- Mammalian Genome, 2005, v. 16, n. 7, p. 505, doi. 10.1007/s00335-005-0022-2
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- Article
An extinct nestorid parrot ( Aves, Psittaciformes, Nestoridae) from the Chatham Islands, New Zealand.
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- Zoological Journal of the Linnean Society, 2014, v. 172, n. 1, p. 185, doi. 10.1111/zoj.12164
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- Article
Additional evaluations show that specific BWA‐aln settings still outperform BWA‐mem for ancient DNA data alignment.
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- Ecology & Evolution (20457758), 2021, v. 11, n. 24, p. 18743, doi. 10.1002/ece3.8297
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- Article
Spatiotemporal landscape genetics: Investigating ecology and evolution through space and time.
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- Molecular Ecology, 2020, v. 29, n. 2, p. 218, doi. 10.1111/mec.15315
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- Article
Stochastic models support rapid peopling of Late Pleistocene Sahul.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-21551-3
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- Article
AmericaPlex26: A SNaPshot Multiplex System for Genotyping the Main Human Mitochondrial Founder Lineages of the Americas.
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- PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0093292
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- Article
Mitochondrial Genome Sequencing in Mesolithic North East Europe Unearths a New Sub-Clade within the Broadly Distributed Human Haplogroup C1.
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- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0087612
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- Article
High-Resolution Analysis of Cytosine Methylation in Ancient DNA.
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- PLoS ONE, 2012, v. 7, n. 1, p. 1, doi. 10.1371/journal.pone.0030226
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- Article
Ethnic and Mouse Strain Differences in Central Corneal Thickness and Association with Pigmentation Phenotype.
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- PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0022103
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- Article
EL ADN ANTIGUO Y LA HISTORIA DEL POBLAMIENTO TEMPRANO DEL OESTE DE SUDAMÉRICA: LO QUE HEMOS APRENDIDO Y HACIA DÓNDE VAMOS.
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- Boletín de Arqueología PUCP, 2011, n. 15, p. 17, doi. 10.18800/boletindearqueologiapucp.201101.002
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- Article