Works by Liu, Tie-Yan

Results: 24

An efficient Lorentz equivariant graph neural network for jet tagging.

Published in:

Journal of High Energy Physics, 2022, v. 2022, n. 7, p. 1, doi. 10.1007/JHEP07(2022)030

By:

Gong, Shiqi;
Meng, Qi;
Zhang, Jue;
Qu, Huilin;
Li, Congqiao;
Qian, Sitian;
Du, Weitao;
Ma, Zhi-Ming;
Liu, Tie-Yan

Publication type:

Article

Discovering drug–target interaction knowledge from biomedical literature.

Published in:

Bioinformatics, 2022, v. 38, n. 22, p. 5100, doi. 10.1093/bioinformatics/btac648

By:

Hou, Yutai;
Xia, Yingce;
Wu, Lijun;
Xie, Shufang;
Fan, Yang;
Zhu, Jinhua;
Qin, Tao;
Liu, Tie-Yan

Publication type:

Article

SAMF: a self-adaptive protein modeling framework.

Published in:

Bioinformatics, 2021, v. 37, n. 22, p. 4075, doi. 10.1093/bioinformatics/btab411

By:

Ding, Wenze;
Xu, Qijiang;
Liu, Siyuan;
Wang, Tong;
Shao, Bin;
Gong, Haipeng;
Liu, Tie-Yan

Publication type:

Article

Exploring the Regulatory Function of the N‐terminal Domain of SARS‐CoV‐2 Spike Protein through Molecular Dynamics Simulation (Adv. Theory Simul. 10/2021).

Published in:

Advanced Theory & Simulations, 2021, v. 4, n. 10, p. 1, doi. 10.1002/adts.202170023

By:

Li, Yao;
Wang, Tong;
Zhang, Juanrong;
Shao, Bin;
Gong, Haipeng;
Wang, Yusong;
He, Xinheng;
Liu, Siyuan;
Liu, Tie‐Yan

Publication type:

Article

Exploring the Regulatory Function of the N‐terminal Domain of SARS‐CoV‐2 Spike Protein through Molecular Dynamics Simulation.

Published in:

Advanced Theory & Simulations, 2021, v. 4, n. 10, p. 1, doi. 10.1002/adts.202100152

By:

Li, Yao;
Wang, Tong;
Zhang, Juanrong;
Shao, Bin;
Gong, Haipeng;
Wang, Yusong;
He, Xinheng;
Liu, Siyuan;
Liu, Tie‐Yan

Publication type:

Article

CopulaNet: Learning residue co-evolution directly from multiple sequence alignment for protein structure prediction.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22869-8

By:

Ju, Fusong;
Zhu, Jianwei;
Shao, Bin;
Kong, Lupeng;
Liu, Tie-Yan;
Zheng, Wei-Mou;
Bu, Dongbo

Publication type:

Article

Exploring deep learning for air pollutant emission estimation.

Published in:

Geoscientific Model Development, 2021, v. 14, n. 7, p. 4641, doi. 10.5194/gmd-14-4641-2021

By:

Huang, Lin;
Liu, Song;
Yang, Zeyuan;
Xing, Jia;
Zhang, Jia;
Bian, Jiang;
Li, Siwei;
Sahu, Shovan Kumar;
Wang, Shuxiao;
Liu, Tie-Yan

Publication type:

Article

Breaking the barriers of data scarcity in drug–target affinity prediction.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 6, p. 1, doi. 10.1093/bib/bbad386

By:

Pei, Qizhi;
Wu, Lijun;
Zhu, Jinhua;
Xia, Yingce;
Xie, Shufang;
Qin, Tao;
Liu, Haiguang;
Liu, Tie-Yan;
Yan, Rui

Publication type:

Article

DSN-DDI: an accurate and generalized framework for drug–drug interaction prediction by dual-view representation learning.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac597

By:

Li, Zimeng;
Zhu, Shichao;
Shao, Bin;
Zeng, Xiangxiang;
Wang, Tong;
Liu, Tie-Yan

Publication type:

Article

R<sup>2</sup>-DDI: relation-aware feature refinement for drug–drug interaction prediction.

Published in:

Briefings in Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1093/bib/bbac576

By:

Lin, Jiacheng;
Wu, Lijun;
Zhu, Jinhua;
Liang, Xiaobo;
Xia, Yingce;
Xie, Shufang;
Qin, Tao;
Liu, Tie-Yan

Publication type:

Article

BioGPT: generative pre-trained transformer for biomedical text generation and mining.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 6, p. 1, doi. 10.1093/bib/bbac409

By:

Luo, Renqian;
Sun, Liai;
Xia, Yingce;
Qin, Tao;
Zhang, Sheng;
Poon, Hoifung;
Liu, Tie-Yan

Publication type:

Article

SPRoBERTa: protein embedding learning with local fragment modeling.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 6, p. 1, doi. 10.1093/bib/bbac401

By:

Wu, Lijun;
Yin, Chengcan;
Zhu, Jinhua;
Wu, Zhen;
He, Liang;
Xia, Yingce;
Xie, Shufang;
Qin, Tao;
Liu, Tie-Yan

Publication type:

Article

Improved drug–target interaction prediction with intermolecular graph transformer.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 5, p. 1, doi. 10.1093/bib/bbac162

By:

Liu, Siyuan;
Wang, Yusong;
Deng, Yifan;
He, Liang;
Shao, Bin;
Yin, Jian;
Zheng, Nanning;
Liu, Tie-Yan;
Wang, Tong

Publication type:

Article

Reinforcement learning behaviors in sponsored search.

Published in:

Applied Stochastic Models in Business & Industry, 2016, v. 32, n. 3, p. 358, doi. 10.1002/asmb.2157

By:

Chen, Wei;
Liu, Tie‐Yan;
Yang, Xinxin

Publication type:

Article

Rejoinder to 'Reinforcement learning behaviors in sponsored search'.

Published in:

Applied Stochastic Models in Business & Industry, 2016, v. 32, n. 3, p. 371, doi. 10.1002/asmb.2174

By:

Chen, Wei;
Liu, Tie‐Yan;
Yang, Xinxin

Publication type:

Article

Enhancing geometric representations for molecules with equivariant vector-scalar interactive message passing.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-023-43720-2

By:

Wang, Yusong;
Wang, Tong;
Li, Shaoning;
He, Xinheng;
Li, Mingyu;
Wang, Zun;
Zheng, Nanning;
Shao, Bin;
Liu, Tie-Yan

Publication type:

Article

Page importance computation based on Markov processes.

Published in:

Information Retrieval Journal, 2011, v. 14, n. 5, p. 488, doi. 10.1007/s10791-011-9164-x

By:

Gao, Bin;
Liu, Tie-Yan;
Liu, Yuting;
Wang, Taifeng;
Ma, Zhi-Ming;
Li, Hang

Publication type:

Article

A general approximation framework for direct optimization of information retrieval measures.

Published in:

Information Retrieval Journal, 2010, v. 13, n. 4, p. 375, doi. 10.1007/s10791-009-9124-x

By:

Qin, Tao;
Liu, Tie-Yan;
Li, Hang

Publication type:

Article

LETOR: A benchmark collection for research on learning to rank for information retrieval.

Published in:

Information Retrieval Journal, 2010, v. 13, n. 4, p. 346, doi. 10.1007/s10791-009-9123-y

By:

Qin, Tao;
Liu, Tie-Yan;
Xu, Jun;
Li, Hang

Publication type:

Article

Stabilize deep ResNet with a sharp scaling factor τ.

Published in:

Machine Learning, 2022, v. 111, n. 9, p. 3359, doi. 10.1007/s10994-022-06192-x

By:

Zhang, Huishuai;
Yu, Da;
Yi, Mingyang;
Chen, Wei;
Liu, Tie-Yan

Publication type:

Article

Introduction: special issue of selected papers from ACML 2015.

Published in:

2017

By:

Holmes, Geoffrey;
Liu, Tie-Yan;
Li, Hang;
King, Irwin;
Sugiyama, Masashi;
Zhou, Zhi-Hua

Publication type:

Editorial

Invertible Rescaling Network and Its Extensions.

Published in:

International Journal of Computer Vision, 2023, v. 131, n. 1, p. 134, doi. 10.1007/s11263-022-01688-4

By:

Xiao, Mingqing;
Zheng, Shuxin;
Liu, Chang;
Lin, Zhouchen;
Liu, Tie-Yan

Publication type:

Article

AIMD-Chig: Exploring the conformational space of a 166-atom protein Chignolin with ab initio molecular dynamics.

Published in:

Scientific Data, 2023, v. 10, n. 1, p. 1, doi. 10.1038/s41597-023-02465-9

By:

Wang, Tong;
He, Xinheng;
Li, Mingyu;
Shao, Bin;
Liu, Tie-Yan

Publication type:

Article

Complementing sequence-derived features with structural information extracted from fragment libraries for protein structure prediction.

Published in:

BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04258-6

By:

Liu, Siyuan;
Wang, Tong;
Xu, Qijiang;
Shao, Bin;
Yin, Jian;
Liu, Tie-Yan

Publication type:

Article