Works by Liu, Shanlin

Results: 72
    1
    2

    SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.

    Published in:
    Bioinformatics, 2014, v. 30, n. 12, p. 1660, doi. 10.1093/bioinformatics/btu077
    By:
    • Xie, Yinlong;
    • Wu, Gengxiong;
    • Tang, Jingbo;
    • Luo, Ruibang;
    • Patterson, Jordan;
    • Liu, Shanlin;
    • Huang, Weihua;
    • He, Guangzhu;
    • Gu, Shengchang;
    • Li, Shengkang;
    • Zhou, Xin;
    • Lam, Tak-Wah;
    • Li, Yingrui;
    • Xu, Xun;
    • Wong, Gane Ka-Shu;
    • Wang, Jun
    Publication type:
    Article
    3
    4

    Persistent Gene Flow Suggests an Absence of Reproductive Isolation in an African Antelope Speciation Model.

    Published in:
    Systematic Biology, 2024, v. 73, n. 6, p. 979, doi. 10.1093/sysbio/syae037
    By:
    • Wang, Xi;
    • Pedersen, Casper-Emil Tingskov;
    • Athanasiadis, Georgios;
    • Garcia-Erill, Genís;
    • Hanghøj, Kristian;
    • Bertola, Laura D;
    • Rasmussen, Malthe Sebro;
    • Schubert, Mikkel;
    • Liu, Xiaodong;
    • Li, Zilong;
    • Lin, Long;
    • Balboa, Renzo F;
    • Jørsboe, Emil;
    • Nursyifa, Casia;
    • Liu, Shanlin;
    • Muwanika, Vincent;
    • Masembe, Charles;
    • Chen, Lei;
    • Wang, Wen;
    • Moltke, Ida
    Publication type:
    Article
    5
    6
    7
    8
    9
    10

    Efficient COI barcoding using high throughput single-end 400 bp sequencing.

    Published in:
    BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-07255-w
    By:
    • Yang, Chentao;
    • Zheng, Yuxuan;
    • Tan, Shangjin;
    • Meng, Guanliang;
    • Rao, Wei;
    • Yang, Caiqing;
    • Bourne, David G.;
    • O'Brien, Paul A.;
    • Xu, Junqiang;
    • Liao, Sha;
    • Chen, Ao;
    • Chen, Xiaowei;
    • Jia, Xinrui;
    • Zhang, Ai-bing;
    • Liu, Shanlin
    Publication type:
    Article
    11

    An integrative phylogenomic approach to elucidate the evolutionary history and divergence times of Neuropterida (Insecta: Holometabola).

    Published in:
    BMC Evolutionary Biology, 2020, v. 20, n. 1, p. 1, doi. 10.1186/s12862-020-01631-6
    By:
    • Vasilikopoulos, Alexandros;
    • Misof, Bernhard;
    • Meusemann, Karen;
    • Lieberz, Doria;
    • Flouri, Tomáš;
    • Beutel, Rolf G.;
    • Niehuis, Oliver;
    • Wappler, Torsten;
    • Rust, Jes;
    • Peters, Ralph S.;
    • Donath, Alexander;
    • Podsiadlowski, Lars;
    • Mayer, Christoph;
    • Bartel, Daniela;
    • Böhm, Alexander;
    • Liu, Shanlin;
    • Kapli, Paschalia;
    • Greve, Carola;
    • Jepson, James E.;
    • Liu, Xingyue
    Publication type:
    Article
    12

    Re-assessing the diversity of negative strand RNA viruses in insects.

    Published in:
    PLoS Pathogens, 2019, v. 15, n. 12, p. 1, doi. 10.1371/journal.ppat.1008224
    By:
    • Käfer, Simon;
    • Paraskevopoulou, Sofia;
    • Zirkel, Florian;
    • Wieseke, Nicolas;
    • Donath, Alexander;
    • Petersen, Malte;
    • Jones, Terry C.;
    • Liu, Shanlin;
    • Zhou, Xin;
    • Middendorf, Martin;
    • Junglen, Sandra;
    • Misof, Bernhard;
    • Drosten, Christian
    Publication type:
    Article
    13
    14
    15
    16
    17
    18

    Genomic insights into the conservation status of the world's last remaining Sumatran rhinoceros populations.

    Published in:
    Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22386-8
    By:
    • von Seth, Johanna;
    • Dussex, Nicolas;
    • Díez-del-Molino, David;
    • van der Valk, Tom;
    • Kutschera, Verena E.;
    • Kierczak, Marcin;
    • Steiner, Cynthia C.;
    • Liu, Shanlin;
    • Gilbert, M. Thomas P.;
    • Sinding, Mikkel-Holger S.;
    • Prost, Stefan;
    • Guschanski, Katerina;
    • Nathan, Senthilvel K. S. S.;
    • Brace, Selina;
    • Chan, Yvonne L.;
    • Wheat, Christopher W.;
    • Skoglund, Pontus;
    • Ryder, Oliver A.;
    • Goossens, Benoit;
    • Götherström, Anders
    Publication type:
    Article
    19
    20
    21
    22
    23

    Beyond Drosophila: resolving the rapid radiation of schizophoran flies with phylotranscriptomics.

    Published in:
    BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-020-00944-8
    By:
    • Bayless, Keith M.;
    • Trautwein, Michelle D.;
    • Meusemann, Karen;
    • Shin, Seunggwan;
    • Petersen, Malte;
    • Donath, Alexander;
    • Podsiadlowski, Lars;
    • Mayer, Christoph;
    • Niehuis, Oliver;
    • Peters, Ralph S.;
    • Meier, Rudolf;
    • Kutty, Sujatha Narayanan;
    • Liu, Shanlin;
    • Zhou, Xin;
    • Misof, Bernhard;
    • Yeates, David K.;
    • Wiegmann, Brian M.
    Publication type:
    Article
    24

    Genomic architecture of endogenous ichnoviruses reveals distinct evolutionary pathways leading to virus domestication in parasitic wasps.

    Published in:
    BMC Biology, 2020, v. 18, n. 1, p. 1, doi. 10.1186/s12915-020-00822-3
    By:
    • Legeai, Fabrice;
    • Santos, Bernardo F.;
    • Robin, Stéphanie;
    • Bretaudeau, Anthony;
    • Dikow, Rebecca B.;
    • Lemaitre, Claire;
    • Jouan, Véronique;
    • Ravallec, Marc;
    • Drezen, Jean-Michel;
    • Tagu, Denis;
    • Baudat, Frédéric;
    • Gyapay, Gabor;
    • Zhou, Xin;
    • Liu, Shanlin;
    • Webb, Bruce A.;
    • Brady, Seán G.;
    • Volkoff, Anne-Nathalie
    Publication type:
    Article
    25
    26
    27
    28

    High-throughput monitoring of wild bee diversity and abundance via mitogenomics.

    Published in:
    Methods in Ecology & Evolution, 2015, v. 6, n. 9, p. 1034, doi. 10.1111/2041-210X.12416
    By:
    • Tang, Min;
    • Hardman, Chloe J.;
    • Ji, Yinqiu;
    • Meng, Guanliang;
    • Liu, Shanlin;
    • Tan, Meihua;
    • Yang, Shenzhou;
    • Moss, Ellen D.;
    • Wang, Jiaxin;
    • Yang, Chenxue;
    • Bruce, Catharine;
    • Nevard, Tim;
    • Potts, Simon G.;
    • Zhou, Xin;
    • Yu, Douglas W.;
    • Gilbert, M.
    Publication type:
    Article
    29
    30
    31
    32
    33
    34
    35

    Phylogenetic Origin and Diversification of RNAi Pathway Genes in Insects.

    Published in:
    Genome Biology & Evolution, 2016, v. 8, n. 12, p. 3784, doi. 10.1093/gbe/evw281
    By:
    • Dowling, Daniel;
    • Pauli, Thomas;
    • Donath, Alexander;
    • Meusemann, Karen;
    • Podsiadlowski, Lars;
    • Petersen, Malte;
    • Peters, Ralph S.;
    • Mayer, Christoph;
    • Shanlin Liu;
    • Xin Zhou;
    • Misof, Bernhard;
    • Niehuis, Oliver
    Publication type:
    Article
    36
    37
    38

    Phylogenomics changes our understanding about earwig evolution.

    Published in:
    Systematic Entomology, 2020, v. 45, n. 3, p. 516, doi. 10.1111/syen.12420
    By:
    • Wipfler, Benjamin;
    • Koehler, Ward;
    • Frandsen, Paul B.;
    • Donath, Alexander;
    • Liu, Shanlin;
    • Machida, Ryuichiro;
    • Misof, Bernhard;
    • Peters, Ralph S.;
    • Shimizu, Shota;
    • Zhou, Xin;
    • Simon, Sabrina
    Publication type:
    Article
    39
    40
    41
    42
    43
    44
    45
    46
    47
    48
    49
    50

    Erratum to: Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing.

    Published in:
    2018
    By:
    • Mak, Sarah Siu Tze;
    • Gopalakrishnan, Shyam;
    • Carøe, Christian;
    • Geng, Chunyu;
    • Liu, Shanlin;
    • Sinding, Mikkel-Holger S;
    • Kuderna, Lukas F K;
    • Zhang, Wenwei;
    • Fu, Shujin;
    • Vieira, Filipe G;
    • Germonpré, Mietje;
    • Bocherens, Hervé;
    • Fedorov, Sergey;
    • Petersen, Bent;
    • Sicheritz-Pontén, Thomas;
    • Marques-Bonet, Tomas;
    • Zhang, Guojie;
    • Jiang, Hui;
    • Gilbert, M Thomas P
    Publication type:
    Correction Notice