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Strategy for protein isoform identification from expressed sequence tags and its application to peptide mass fingerprinting.
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- Proteomics, 2001, v. 1, n. 2, p. 186, doi. 10.1002/1615-9861(200102)1:2<186::AID-PROT186>3.0.CO;2-G
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- Article
In silico analysis of the human milk oligosaccharide glycome reveals key enzymes of their biosynthesis.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-14260-4
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- Article
A Combined CXCL10, CXCL8 and H-FABP Panel for the Staging of Human African Trypanosomiasis Patients.
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- PLoS Neglected Tropical Diseases, 2009, v. 3, n. 6, p. 1, doi. 10.1371/journal.pntd.0000459
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- Article
A Combined CXCL10, CXCL8 and H-FABP Panel for the Staging of Human African Trypanosomiasis Patients.
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- PLoS Neglected Tropical Diseases, 2009, v. 3, n. 6, p. 1, doi. 10.1371/journal.pntd.0000459
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- Article
UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands.
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- Nucleic Acids Research, 2019, v. 47, n. D1, p. D1236, doi. 10.1093/nar/gky832
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- Article
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support.
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- Nucleic Acids Research, 2014, v. 42, n. W1, p. W436, doi. 10.1093/nar/gku380
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- Article
ConoDictor: a tool for prediction of conopeptide superfamilies.
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- Nucleic Acids Research, 2012, v. 40, p. W238, doi. 10.1093/nar/gks337
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- Article
Absolute quantification of transcription factors during cellular differentiation using multiplexed targeted proteomics.
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- Nature Methods, 2013, v. 10, n. 6, p. 570, doi. 10.1038/nmeth.2441
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- Article
Deciphering the human nucleolar proteome.
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- Mass Spectrometry Reviews, 2006, v. 25, n. 2, p. 215, doi. 10.1002/mas.20067
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- Article
Processing strategies and software solutions for data-independent acquisition in mass spectrometry.
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- Proteomics, 2015, v. 15, n. 5/6, p. 964, doi. 10.1002/pmic.201400323
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- Article
Early activation of the fatty acid metabolism pathway by chronic high glucose exposure in rat insulin secretory β-cells.
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- Proteomics, 2010, v. 10, n. 1, p. 59, doi. 10.1002/pmic.200900080
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- Article
Systems Biology.
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- Proteomics, 2007, v. 7, n. 6, p. 825, doi. 10.1002/pmic.200790020
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- Article
Proteome informatics II: Bioinformatics for comparative proteomics.
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- Proteomics, 2006, v. 6, n. 23, p. 6380, doi. 10.1002/pmic.200690148
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- Article
Web-based MS/MS Data Analysis.
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- Proteomics, 2006, v. 6, n. S2, p. 22, doi. 10.1002/pmic.200600524
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- Article
Book Reviews: Digital Code of Life: How Bioinformatics is Revolutionizing Science, Medicine, and Business. By G. Moody.
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- Proteomics, 2004, v. 4, n. 10, p. 3288, doi. 10.1002/pmic.200490069
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- Article
GAG-DB, the New Interface of the Three-Dimensional Landscape of Glycosaminoglycans.
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- Biomolecules (2218-273X), 2020, v. 10, n. 12, p. 1660, doi. 10.3390/biom10121660
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- Article
Optimization by infusion of multiple reaction monitoring transitions for sensitive quantification of peptides by liquid chromatography/mass spectrometry.
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- Rapid Communications in Mass Spectrometry: RCM, 2017, v. 31, n. 9, p. 753, doi. 10.1002/rcm.7839
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- Article
Toolboxes for a standardised and systematic study of glycans.
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- BMC Bioinformatics, 2014, v. 15, n. Suppl 1, p. 1, doi. 10.1186/1471-2105-15-S1-S9
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- Article
NETTAB 2012 on “Integrated Bio-Search”
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- BMC Bioinformatics, 2014, v. 15, n. 1, p. S1, doi. 10.1186/1471-2105-15-S1-S1
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- Article
pROC: an open-source package for R and S+ to analyze and compare ROC curves.
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- BMC Bioinformatics, 2011, v. 12, n. 1, p. 77, doi. 10.1186/1471-2105-12-77
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- Article
Global analysis of genomic texts: The distribution of AGCT tetranucleotides in the Escherichia coli and Bacillus subtilis genomes predicts translational frameshifting and ribosomal hopping in several genes.
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- Electrophoresis, 1998, v. 19, n. 4, p. 515, doi. 10.1002/elps.1150190411
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- Article
LectinOracle: A Generalizable Deep Learning Model for Lectin–Glycan Binding Prediction.
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- Advanced Science, 2022, v. 9, n. 1, p. 1, doi. 10.1002/advs.202103807
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- Article
LectinOracle: A Generalizable Deep Learning Model for Lectin–Glycan Binding Prediction (Adv. Sci. 1/2022).
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- Advanced Science, 2022, v. 9, n. 1, p. 1, doi. 10.1002/advs.202270004
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- Article
rBAN: retro-biosynthetic analysis of nonribosomal peptides.
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- Journal of Cheminformatics, 2019, v. 11, n. 1, p. 1, doi. 10.1186/s13321-019-0335-x
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- Article
A multiparameter panel method for outcome prediction following aneurysmal subarachnoid hemorrhage.
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- Intensive Care Medicine, 2010, v. 36, n. 1, p. 107, doi. 10.1007/s00134-009-1641-y
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- Article
Evolutionary Glycomics: A Comprehensive Study of Vertebrate Host Serum/Plasma Glycome Using Orthogonal Glycomics Techniques.
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- FASEB Journal, 2021, v. 35, p. N.PAG, doi. 10.1096/fasebj.2021.35.S1.04538
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- Article
A Bioinformatics View of Glycan–Virus Interactions.
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- Viruses (1999-4915), 2019, v. 11, n. 4, p. 374, doi. 10.3390/v11040374
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- Article
Proteome-wide prediction of bacterial carbohydrate-binding proteins as a tool for understanding commensal and pathogen colonisation of the vaginal microbiome.
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- NPJ Biofilms & Microbiomes, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41522-021-00220-9
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- Article
Comparative Proteomic Profiling of Ehrlichia ruminantium Pathogenic Strain and Its High-Passaged Attenuated Strain Reveals Virulence and Attenuation-Associated Proteins.
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- PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0145328
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- Article
Glycosaminoglycanomics: where we are.
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- Glycoconjugate Journal, 2017, v. 34, n. 3, p. 339, doi. 10.1007/s10719-016-9747-2
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- Article
Probabilistic alignment of motifs with sequences.
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- Bioinformatics, 2002, v. 18, n. 8, p. 1091, doi. 10.1093/bioinformatics/18.8.1091
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- Article
Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users.
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- Nucleic Acids Research, 2021, v. 49, n. W1, p. W216, doi. 10.1093/nar/gkab225
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- Article
Norine: update of the nonribosomal peptide resource.
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- Nucleic Acids Research, 2020, v. 48, n. D1, p. D465, doi. 10.1093/nar/gkz1000
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- Article
Correction to: Adduct annotation in liquid chromatography/high-resolution mass spectrometry to enhance compound identification.
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- 2021
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- Correction Notice
Adduct annotation in liquid chromatography/high-resolution mass spectrometry to enhance compound identification.
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- Analytical & Bioanalytical Chemistry, 2021, v. 413, n. 2, p. 503, doi. 10.1007/s00216-020-03019-3
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- Article
SugarSketcher: Quick and Intuitive Online Glycan Drawing.
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- Molecules, 2018, v. 23, n. 12, p. 3206, doi. 10.3390/molecules23123206
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- Article
BiotechLec: an interactive guide of commercial lectins for glycobiology and biomedical research applications.
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- Glycobiology, 2023, v. 33, n. 9, p. 684, doi. 10.1093/glycob/cwad034
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- Article
A pipeline to translate glycosaminoglycan sequences into 3D models. Application to the exploration of glycosaminoglycan conformational space.
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- Glycobiology, 2019, v. 29, n. 1, p. 36, doi. 10.1093/glycob/cwy084
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- Article
UniLectin, A One-Stop-Shop to Explore and Study Carbohydrate-Binding Proteins.
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- Current Protocols, 2021, v. 1, n. 11, p. 1, doi. 10.1002/cpz1.305
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- Article
A Comprehensive Phylogenetic and Bioinformatics Survey of Lectins in the Fungal Kingdom.
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- Journal of Fungi, 2021, v. 7, n. 6, p. 1, doi. 10.3390/jof7060453
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- Article
The choanoflagellate pore-forming lectin SaroL-1 punches holes in cancer cells by targeting the tumor-related glycosphingolipid Gb3.
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- Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03869-w
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- Article
Simulated digestions of free oligosaccharides and mucin-type O-glycans reveal a potential role for Clostridium perfringens.
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- Scientific Reports, 2024, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-51012-4
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- Publication type:
- Article
Sweet and Sour Ehrlichia : Glycoproteomics and Phosphoproteomics Reveal New Players in Ehrlichia ruminantium Physiology and Pathogenesis.
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- Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00450
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- Article
Back Cover: PepSweetener: A Web‐Based Tool to Support Manual Annotation of Intact Glycopeptide MS Spectra.
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- Proteomics - Clinical Applications, 2018, v. 12, n. 5, p. 1, doi. 10.1002/prca.201700069
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- Article
PepSweetener: A Web‐Based Tool to Support Manual Annotation of Intact Glycopeptide MS Spectra.
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- Proteomics - Clinical Applications, 2018, v. 12, n. 5, p. 1, doi. 10.1002/prca.201700069
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- Article
Using bioinformatic resources in the proteomic analysis of biological fluids.
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- Proteomics - Clinical Applications, 2007, v. 1, n. 8, p. 900, doi. 10.1002/prca.200700188
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- Article
Peptidomic and transcriptomic profiling of four distinct spider venoms.
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- PLoS ONE, 2017, v. 12, n. 3, p. 1, doi. 10.1371/journal.pone.0172966
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- Article