Works by Lichuan Gu

Results: 72

Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP.

Published in:

Nature Structural & Molecular Biology, 2012, v. 19, n. 7, p. 725, doi. 10.1038/nsmb.2332

By:

Shang, Guijun;
Zhu, Deyu;
Li, Ning;
Zhang, Junbing;
Zhu, Chunyuan;
Lu, Defen;
Liu, Cuilan;
Yu, Qian;
Zhao, Yanyu;
Xu, Sujuan;
Gu, Lichuan

Publication type:

Article

Crystal structures of aprataxin ortholog Hnt3 reveal the mechanism for reversal of 5?-adenylated DNA.

Published in:

Nature Structural & Molecular Biology, 2011, v. 18, n. 11, p. 1297, doi. 10.1038/nsmb.2145

By:

Gong, Yong;
Zhu, Deyu;
Ding, Jingjin;
Dou, Chuan-Na;
Ren, Xiaoming;
Gu, Lichuan;
Jiang, Tao;
Wang, Da-Cheng

Publication type:

Article

Structural basis for the catalytic mechanism of phosphothreonine lyase.

Published in:

Nature Structural & Molecular Biology, 2008, v. 15, n. 1, p. 101, doi. 10.1038/nsmb1329

By:

Linjie Chen;
Huayi Wang;
Jie Zhang;
Lichuan Gu;
Niu Huang;
Jian-Min Zhou;
Jijie Chai

Publication type:

Article

Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry.

Published in:

Nature Structural & Molecular Biology, 2006, v. 13, n. 12, p. 1084, doi. 10.1038/nsmb1179

By:

Zhuoru Wu;
Nieng Yan;
Liang Feng;
Oberstein, Adam;
Hanchi Yan;
Baker, Rosanna P.;
Lichuan Gu;
Jeffrey, Philip D.;
Urban, Sinisa;
Yigong Shi

Publication type:

Article

An efficient method for N-acetyl- d-neuraminic acid production using coupled bacterial cells with a safe temperature-induced system.

Published in:

Applied Microbiology & Biotechnology, 2010, v. 86, n. 2, p. 481, doi. 10.1007/s00253-009-2302-3

By:

Yinan Zhang;
Fei Tao;
Miaofen Du;
Cuiqing Ma;
Jianhua Qiu;
Lichuan Gu;
Xiaofei He;
Ping Xu

Publication type:

Article

Engineering of Burkholderia thailandensis strain E264 serves as a chassis for expression of complex specialized metabolites.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1073243

By:

Zong-Jie Wang;
Xiaotong Liu;
Haibo Zhou;
Yang Liu;
Lin Zhong;
Xue Wang;
Qiang Tu;
Liujie Huo;
Fu Yan;
Lichuan Gu;
Rolf Müller;
Youming Zhang;
Xiaoying Bian;
Xiaokun Xu

Publication type:

Article

Antibiotic resistance and pathogenicity assessment of various Gardnerella sp. strains in local China.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1009798

By:

Kundi Zhang;
Mengyao Lu;
Xiaoxuan Zhu;
Kun Wang;
Xuemei Jie;
Tan Li;
Hongjie Dong;
Rongguo Li;
Fengyu Zhang;
Lichuan Gu

Publication type:

Article

Deep neural learning based protein function prediction.

Published in:

Mathematical Biosciences & Engineering, 2022, v. 19, n. 3, p. 2471, doi. 10.3934/mbe.2022114

By:

Wenjun Xu;
Zihao Zhao;
Hongwei Zhang;
Minglei Hu;
Ning Yang;
Hui Wang;
Chao Wang;
Jun Jiao;
Lichuan Gu

Publication type:

Article

Multi-objective grasshopper optimization algorithm based on multi-group and co-evolution.

Published in:

Mathematical Biosciences & Engineering, 2021, v. 18, n. 3, p. 2527, doi. 10.3934/mbe.2021129

By:

Chao Wang;
Jian Li;
Haidi Rao;
Aiwen Chen;
Jun Jiao;
Nengfeng Zou;
Lichuan Gu

Publication type:

Article

Dual discriminator GAN-based synthetic crop disease image generation for precise crop disease identification.

Published in:

Plant Methods, 2025, v. 21, n. 1, p. 1, doi. 10.1186/s13007-025-01361-0

By:

Wang, Chao;
Xia, Yuting;
Xia, Lunlong;
Wang, Qingyong;
Gu, Lichuan

Publication type:

Article

LncRNA–protein interaction prediction with reweighted feature selection.

Published in:

BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05536-1

By:

Lv, Guohao;
Xia, Yingchun;
Qi, Zhao;
Zhao, Zihao;
Tang, Lianggui;
Chen, Cheng;
Yang, Shuai;
Wang, Qingyong;
Gu, Lichuan

Publication type:

Article

Structural Insights into a Unique Legionella pneumophila Effector LidA Recognizing Both GDP and GTP Bound Rab1 in Their Active State.

Published in:

PLoS Pathogens, 2012, v. 8, n. 3, p. 1, doi. 10.1371/journal.ppat.1002528

By:

Wei Cheng;
Kun Yin;
Defen Lu;
Bingqing Li;
Deyu Zhu;
Yuzhen Chen;
Hao Zhang;
Sujuan Xu;
Jijie Chai;
Lichuan Gu

Publication type:

Article

Structural basis for the regulation of chemotaxis by MapZ in the presence of c-di-GMP.

Published in:

Acta Crystallographica: Section D, Structural Biology, 2017, v. 73, n. 8, p. 683, doi. 10.1107/S2059798317009998

By:

Zhu, Yingxiao;
Yuan, Zenglin;
Gu, Lichuan

Publication type:

Article

Deep weighted survival neural networks to survival risk prediction.

Published in:

Complex & Intelligent Systems, 2025, v. 11, n. 1, p. 1, doi. 10.1007/s40747-024-01670-2

By:

Yu, Hui;
Wang, Qingyong;
Zhou, Xiaobo;
Gu, Lichuan;
Zhao, Zihao

Publication type:

Article

Deep weighted survival neural networks to survival risk prediction.

Published in:

Complex & Intelligent Systems, 2025, v. 11, n. 1, p. 1, doi. 10.1007/s40747-024-01670-2

By:

Yu, Hui;
Wang, Qingyong;
Zhou, Xiaobo;
Gu, Lichuan;
Zhao, Zihao

Publication type:

Article

Gradient convolutional neural network for classification of agricultural fields with contour levee.

Published in:

International Journal of Remote Sensing, 2022, v. 43, n. 1, p. 75, doi. 10.1080/01431161.2021.2003467

By:

Meyarian, Abolfazl;
Yuan, Xiaohui;
Liang, Lu;
Wang, Wencheng;
Gu, Lichuan

Publication type:

Article

Clustering‐based recommendation method with enhanced grasshopper optimisation algorithm.

Published in:

CAAI Transactions on Intelligence Technology, 2025, v. 10, n. 2, p. 494, doi. 10.1049/cit2.12408

By:

Zhao, Zihao;
Xia, Yingchun;
Xu, Wenjun;
Yu, Hui;
Yang, Shuai;
Chen, Cheng;
Yuan, Xiaohui;
Zhou, Xiaobo;
Wang, Qingyong;
Gu, Lichuan

Publication type:

Article

DexA70, the Truncated Form of a Self-Produced Dextranase, Effectively Disrupts Streptococcus mutans Biofilm.

Published in:

Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.737458

By:

Liu, Nan;
Li, Xin;
Wang, Maofeng;
Zhang, Fengyu;
Wang, Chuandong;
Zhang, Kundi;
Wang, Hongwei;
Xu, Sujuan;
Hu, Wei;
Gu, Lichuan

Publication type:

Article

Membrane association of SadC enhances its diguanylate cyclase activity to control exopolysaccharides synthesis and biofilm formation in Pseudomonas aeruginosa.

Published in:

Environmental Microbiology, 2016, v. 18, n. 10, p. 3440, doi. 10.1111/1462-2920.13263

By:

Zhu, Bin;
Liu, Cuilan;
Liu, Shiheng;
Cong, Hengjiang;
Chen, Yihuan;
Gu, Lichuan;
Ma, Luyan Z.

Publication type:

Article

Structural insights into the T6 SS effector protein Tse3 and the Tse3- Tsi3 complex from P seudomonas aeruginosa reveal a calcium-dependent membrane-binding mechanism.

Published in:

Molecular Microbiology, 2014, v. 92, n. 5, p. 1092, doi. 10.1111/mmi.12616

By:

Lu, Defen;
Shang, Guijun;
Zhang, Heqiao;
Yu, Qian;
Cong, Xiaoyan;
Yuan, Jupeng;
He, Fengjuan;
Zhu, Chunyuan;
Zhao, Yanyu;
Yin, Kun;
Chen, Yuanyuan;
Hu, Junqiang;
Zhang, Xiaodan;
Yuan, Zenglin;
Xu, Sujuan;
Hu, Wei;
Cang, Huaixing;
Gu, Lichuan

Publication type:

Article

Research on Practice Problems and Strategies for Professional Master's Degree Candidates for Agriculture.

Published in:

Asian Agricultural Research, 2023, v. 15, n. 1, p. 62, doi. 10.19601/j.cnki.issn1943-9903.2023.01.015

By:

Jun JIAO;
Wenwen ZHA;
Huimin MA;
Cheng ZHU;
Chao WANG;
Lichuan GU

Publication type:

Article

Discovery of N-hydroxy-4-(3-phenylpropanamido) benzamide derivative 5j, a novel histone deacetylase inhibitor, as a potential therapeutic agent for human breast cancer.

Published in:

Cancer Biology & Therapy, 2011, v. 11, n. 5, p. 477, doi. 10.4161/cbt.11.5.14529

By:

Jinhong Feng;
Hao Fang;
Xuejian Wang;
Yuping Jia;
Lei Zhang;
Jie Jiao;
Jian Zhang;
Lichuan Gu;
Wenfang Xu

Publication type:

Article

Protein functional module identification method combining topological features and gene expression data.

Published in:

BMC Genomics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12864-021-07620-3

By:

Zhao, Zihao;
Xu, Wenjun;
Chen, Aiwen;
Han, Yueyue;
Xia, Shengrong;
Xiang, ChuLei;
Wang, Chao;
Jiao, Jun;
Wang, Hui;
Yuan, Xiaohui;
Gu, Lichuan

Publication type:

Article

Molecular mechanism of proteolytic cleavage-dependent activation of CadC-mediated response to acid in E. coli.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06931-x

By:

Chen, Min;
Shang, Ye;
Cui, Wenhao;
Wang, Xiaomeng;
Zhu, Jiakun;
Dong, Hongjie;
Wang, Hongwei;
Su, Tiantian;
Wang, Weiwei;
Zhang, Kundi;
Li, Bingqing;
Xu, Sujuan;
Hu, Wei;
Zhang, Fengyu;
Gu, Lichuan

Publication type:

Article

The cAMP receptor protein from Gardnerella vaginalis is not regulated by ligands.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06957-1

By:

Dong, Hongjie;
Zhang, Junmei;
Zhang, Kundi;
Zhang, Fengyu;
Wang, Shuai;
Wang, Qi;
Xu, Chao;
Yin, Kun;
Gu, Lichuan

Publication type:

Article

Dcsbis (PA2771) from Pseudomonas aeruginosa is a highly active diguanylate cyclase with unique activity regulation.

Published in:

Scientific Reports, 2016, p. 29499, doi. 10.1038/srep29499

By:

Chen, Ying;
Liu, Shiheng;
Liu, Cuilan;
Huang, Yan;
Chi, Kaikai;
Su, Tiantian;
Zhu, Deyu;
Peng, Jin;
Xia, Zhijie;
He, Jing;
Xu, Sujuan;
Hu, Wei;
Gu, Lichuan

Publication type:

Article

A Rational Designed PslG With Normal Biofilm Hydrolysis and Enhanced Resistance to Trypsin-Like Protease Digestion.

Published in:

Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.00760

By:

Su, Tiantian;
He, Jing;
Li, Ningna;
Liu, Shiheng;
Xu, Sujuan;
Gu, Lichuan

Publication type:

Article

Comparative Study of Two Chondroitin Sulfate/Dermatan Sulfate 4- O -Sulfatases With High Identity.

Published in:

Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.01309

By:

Wang, Shumin;
Su, Tiantian;
Zhang, Qingdong;
Guan, Jingwen;
He, Jing;
Gu, Lichuan;
Li, Fuchuan

Publication type:

Article

BrlR from Pseudomonas aeruginosa is a receptor for both cyclic di-GMP and pyocyanin.

Published in:

Nature Communications, 2018, v. 9, p. 1, doi. 10.1038/s41467-018-05004-y

By:

Feng Wang;
Qing He;
Jia Yin;
Sujuan Xu;
Wei Hu;
Lichuan Gu

Publication type:

Article

A fast RT-qPCR system significantly shortens the time for SARSCoV- 2 nucleic acid test.

Published in:

Drug Discoveries & Therapeutics, 2023, v. 17, n. 1, p. 37, doi. 10.5582/ddt.2022.01092

By:

Hongjie Dong;
Kundi Zhang;
Junmei Zhang;
Yumeng Xiao;
Fengyu Zhang;
Maofeng Wang;
Hongwei Wang;
Guihua Zhao;
Shiling Xie;
Xiaohong Xie;
Wei Hu;
Kun Yin;
Lichuan Gu

Publication type:

Article

Expression, purification, and S-nitrosylation of recombinant histone deacetylase 8 in Escherichia coli.

Published in:

BioScience Trends, 2011, v. 5, n. 1, p. 17, doi. 10.5582/bst.2011.v5.1.17

By:

Jinhong Feng;
Fanbo Jing;
Hao Fang;
Lichuan Gu;
Wenfang Xu

Publication type:

Article

Trust Model in Cloud Computing Environment Based on Fuzzy Theory.

Published in:

International Journal of Computers, Communications & Control, 2014, v. 9, n. 5, p. 570, doi. 10.15837/ijccc.2014.5.1276

By:

Lichuan Gu;
Chengji Wang;
Youhua Zhang;
Jinqin Zhong;
Zhiwei Ni

Publication type:

Article

Structural Basis of Competitive Recognition of p53 and MDM2 by HAUSP/USP7: Implications for the Regulation of the p53-MDM2 Pathway.

Published in:

PLoS Biology, 2006, v. 4, n. 2, p. e27, doi. 10.1371/journal.pbio.0040027

By:

Hu, Min;
Gu, Lichuan;
Li, Muyang;
Jeffrey, Philip D.;
Gu, Wei;
Shi, Yigong

Publication type:

Article

A parallel computing-based Deep Attention model for named entity recognition.

Published in:

Journal of Supercomputing, 2020, v. 76, n. 2, p. 814, doi. 10.1007/s11227-019-02985-5

By:

Liu, Xiaojun;
Yang, Ning;
Jiang, Yu;
Gu, Lichuan;
Shi, Xianzhang

Publication type:

Article

A collective entity linking algorithm with parallel computing on large-scale knowledge base.

Published in:

Journal of Supercomputing, 2020, v. 76, n. 2, p. 948, doi. 10.1007/s11227-019-03046-7

By:

Xia, Yingchun;
Wang, Xingyue;
Gu, Lichuan;
Gao, Qijuan;
Jiao, Jun;
Wang, Chao

Publication type:

Article

Robust local binary descriptor in rotation change using polar location.

Published in:

Journal of Electronic Imaging, 2021, v. 30, n. 3, p. 31203, doi. 10.1117/1.JEI.30.3.031203

By:

Zhong, Jinqin;
Li, Yingying;
Gu, Lichuan;
Wang, Qianqian;
Li, Li;
Hu, Yan

Publication type:

Article

Comprehensive Review and Assessment of Computational Methods for Prediction of N6-Methyladenosine Sites.

Published in:

Biology (2079-7737), 2024, v. 13, n. 10, p. 777, doi. 10.3390/biology13100777

By:

Luo, Zhengtao;
Yu, Liyi;
Xu, Zhaochun;
Liu, Kening;
Gu, Lichuan

Publication type:

Article

Identification of Orphan Genes in Unbalanced Datasets Based on Ensemble Learning.

Published in:

Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.00820

By:

Gao, Qijuan;
Jin, Xiu;
Xia, Enhua;
Wu, Xiangwei;
Gu, Lichuan;
Yan, Hanwei;
Xia, Yingchun;
Li, Shaowen

Publication type:

Article

Underdetermined Blind Source Separation of Audio Signals for Group Reared Pigs Based on Sparse Component Analysis.

Published in:

Sensors (14248220), 2024, v. 24, n. 16, p. 5173, doi. 10.3390/s24165173

By:

Pan, Weihao;
Jiao, Jun;
Zhou, Xiaobo;
Xu, Zhengrong;
Gu, Lichuan;
Zhu, Cheng

Publication type:

Article

Research on the Recognition and Tracking of Group-Housed Pigs' Posture Based on Edge Computing.

Published in:

Sensors (14248220), 2023, v. 23, n. 21, p. 8952, doi. 10.3390/s23218952

By:

Zha, Wenwen;
Li, Hualong;
Wu, Guodong;
Zhang, Liping;
Pan, Weihao;
Gu, Lichuan;
Jiao, Jun;
Zhang, Qiang

Publication type:

Article

Transcriptomic and Proteomic Analysis of Gardnerella vaginalis Responding to Acidic pH and Hydrogen Peroxide Stress.

Published in:

Microorganisms, 2023, v. 11, n. 3, p. 695, doi. 10.3390/microorganisms11030695

By:

Zhang, Kundi;
Lu, Mengyao;
Qiu, Yuxin;
Zhu, Xiaoxuan;
Wang, Hongwei;
Huang, Yan;
Dong, Hongjie;
Gu, Lichuan

Publication type:

Article

The PilZ domain of MrkH represents a novel DNA binding motif.

Published in:

2016

By:

Wang, Feng;
He, Qing;
Su, Kaixuan;
Gao, Fei;
Huang, Yan;
Lin, Zong;
Zhu, Deyu;
Gu, Lichuan

Publication type:

Letter

Crystal structure of periplasmic catecholate-siderophore binding protein VctP from Vibrio cholerae at 1.7Å resolution

Published in:

FEBS Letters, 2012, v. 586, n. 8, p. 1240, doi. 10.1016/j.febslet.2012.03.043

By:

Liu, Xiuhua;
Du, Qian;
Wang, Zhi;
Liu, Shiheng;
Li, Ning;
Chen, Ying;
Zhu, Chunyuan;
Zhu, Deyu;
Wei, Tiandi;
Huang, Yan;
Xu, Sujuan;
Gu, Lichuan

Publication type:

Article

SGTCDA: Prediction of circRNA-drug sensitivity associations with interpretable graph transformers and effective assessment.

Published in:

BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-11022-6

By:

Xia, Hongwei;
Dong, Caiyue;
Chen, Xinxing;
Wei, Zhuoyu;
Gu, Lichuan;
Zhu, Xiaolei

Publication type:

Article

UAV Deployment Optimization for Secure Precise Wireless Transmission.

Published in:

Drones (2504-446X), 2023, v. 7, n. 4, p. 224, doi. 10.3390/drones7040224

By:

Shen, Tong;
Xia, Guiyang;
Ye, Jingjing;
Gu, Lichuan;
Zhou, Xiaobo;
Shu, Feng

Publication type:

Article

RT-IVT method allows multiplex real-time quantification of in vitro transcriptional mRNA production.

Published in:

Communications Biology, 2023, v. 6, n. 1, p. 1, doi. 10.1038/s42003-023-04830-1

By:

Zhang, Fengyu;
Wang, Yipeng;
Wang, Xiaomeng;
Dong, Hongjie;
Chen, Min;
Du, Ning;
Wang, Hongwei;
Hu, Wei;
Zhang, Kundi;
Gu, Lichuan

Publication type:

Article

Structural and Biochemical Characterization of BdsA from Bacillus subtilis WU-S2B, a Key Enzyme in the "4S" Desulfurization Pathway.

Published in:

Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.00231

By:

Su, Tiantian;
Su, Jing;
Liu, Shiheng;
Zhang, Conggang;
He, Jing;
Huang, Yan;
Xu, Sujuan;
Gu, Lichuan

Publication type:

Article

DLBWE-Cys: a deep-learning-based tool for identifying cysteine S-carboxyethylation sites using binary-weight encoding.

Published in:

Frontiers in Genetics, 2025, p. 1, doi. 10.3389/fgene.2024.1464976

By:

Luo, Zhengtao;
Wang, Qingyong;
Xia, Yingchun;
Zhu, Xiaolei;
Yang, Shuai;
Xu, Zhaochun;
Gu, Lichuan

Publication type:

Article

YdiV regulates Escherichia coli ferric uptake by manipulating the DNA-binding ability of Fur in a SlyD-dependent manner.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 17, p. 9571, doi. 10.1093/nar/gkaa696

By:

Zhang, Fengyu;
Li, Bingqing;
Dong, Hongjie;
Chen, Min;
Yao, Shun;
Li, Jingwen;
Zhang, Honghai;
Liu, Xiangguo;
Wang, Hongwei;
Song, Nannan;
Zhang, Kundi;
Du, Ning;
Xu, Sujuan;
Gu, Lichuan

Publication type:

Article

T5 exonuclease-dependent assembly offers a low-cost method for efficient cloning and site-directed mutagenesis.

Published in:

Nucleic Acids Research, 2019, v. 47, n. 3, p. e15, doi. 10.1093/nar/gky1169

By:

Xia, Yongzhen;
Li, Kai;
Li, Jingjing;
Wang, Tianqi;
Gu, Lichuan;
Xun, Luying

Publication type:

Article