Works by Li, Lei M.
Results: 24
A probe-treatment-reference (PTR) model for the analysis of oligonucleotide expression microarrays.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-194
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- Article
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis.
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- BMC Bioinformatics, 2007, v. 8, p. 453, doi. 10.1186/1471-2105-8-452
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- Article
RegScaf: a regression approach to scaffolding.
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- Bioinformatics, 2022, v. 38, n. 10, p. 2675, doi. 10.1093/bioinformatics/btac174
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- Article
BAUM: improving genome assembly by adaptive unique mapping and local overlap-layout-consensus approach.
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- Bioinformatics, 2018, v. 34, n. 12, p. 2019, doi. 10.1093/bioinformatics/bty020
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- Article
RegCloser: a robust regression approach to closing genome gaps.
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- BMC Bioinformatics, 2023, v. 23, n. 11, p. 1, doi. 10.1186/s12859-023-05367-0
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- Article
Reconstructing COVID-19 incidences from positive RT-PCR tests by deconvolution.
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- BMC Infectious Diseases, 2023, v. 23, n. 1, p. 1, doi. 10.1186/s12879-023-08667-1
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- Article
Systematic identification of transcription factors associated with patient survival in cancers.
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- BMC Genomics, 2009, v. 10, p. 1, doi. 10.1186/1471-2164-10-225
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- Article
Systematic identification of cell cycle regulated transcription factors from microarray time series data.
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- BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-116
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- Article
Tor1/Sch9-Regulated Carbon Source Substitution Is as Effective as Calorie Restriction in Life Span Extension.
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- PLoS Genetics, 2009, v. 5, n. 5, p. 1, doi. 10.1371/journal.pgen.1000467
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- Article
An adaptive decorrelation method removes Illumina DNA base-calling errors caused by crosstalk between adjacent clusters.
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- Scientific Reports, 2017, p. 41348, doi. 10.1038/srep41348
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- Article
Some Notes on Mutual Information Between Past and Future.
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- Journal of Time Series Analysis, 2006, v. 27, n. 2, p. 309, doi. 10.1111/j.1467-9892.2005.00469.x
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- Article
Sub-array normalization subject to differentiation.
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- Nucleic Acids Research, 2005, v. 33, n. 17, p. 5565, doi. 10.1093/nar/gki844
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- Article
Adjust quality scores from alignment and improve sequencing accuracy.
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- Nucleic Acids Research, 2004, v. 32, n. 17, p. 5183
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- Article
A data integration approach unveils a transcriptional signature of type 2 diabetes progression in rat and human islets.
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- PLoS ONE, 2023, v. 18, n. 10, p. 1, doi. 10.1371/journal.pone.0292579
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- Article
MUREN: a robust and multi-reference approach of RNA-seq transcript normalization.
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- BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-021-04288-0
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- Article
Dual Eigen-modules of Cis-Element Regulation Profiles and Selection of Cognition-Language Eigen-direction along Evolution in Hominidae.
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- Molecular Biology & Evolution, 2020, v. 37, n. 6, p. 1679, doi. 10.1093/molbev/msaa036
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- Article
HAPLOWSER: a whole-genome haplotype browser for personal genome and metagenome.
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- Bioinformatics, 2009, v. 25, n. 18, p. 2430, doi. 10.1093/bioinformatics/btp399
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- Article
MARD: a new method to detect differential gene expression in treatment-control time courses.
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- Bioinformatics, 2006, v. 22, n. 21, p. 2650, doi. 10.1093/bioinformatics/btl451
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- Article
HapEdit: an accuracy assessment viewer for haplotype assembly using massively parallel DNA-sequencing technologies.
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- Nucleic Acids Research, 2011, v. 39, n. suppl_2, p. W557, doi. 10.1093/nar/gkr354
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- Article
Comparative analyses of time-course gene expression profiles of the long-lived sch9Δ mutant.
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- Nucleic Acids Research, 2010, v. 38, n. 1, p. 143, doi. 10.1093/nar/gkp849
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- Article
The cis-trans binding strength defined by motif frequencies facilitates statistical inference of transcriptional regulation.
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- BMC Bioinformatics, 2019, v. 20, n. 7, p. 1, doi. 10.1186/s12859-019-2732-6
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- Article
Deconvolution of Sparse Positive Spikes.
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- Journal of Computational & Graphical Statistics, 2004, v. 13, n. 4, p. 853, doi. 10.1198/106186004X13118
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- Article
Inferring MicroRNA Activities by Combining Gene Expression with MicroRNA Target Prediction.
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- PLoS ONE, 2008, v. 3, n. 4, p. 1, doi. 10.1371/journal.pone.0001989
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- Article
Estimating Phred scores of Illumina base calls by logistic regression and sparse modeling.
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- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1743-4
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- Article