Works by Lewis, Suzanna E

Results: 29
    1

    Finding Our Way through Phenotypes.

    Published in:
    2015
    By:
    • Deans, Andrew R.;
    • Lewis, Suzanna E.;
    • Huala, Eva;
    • Anzaldo, Salvatore S.;
    • Ashburner, Michael;
    • Balhoff, James P.;
    • Blackburn, David C.;
    • Blake, Judith A.;
    • Burleigh, J. Gordon;
    • Chanet, Bruno;
    • Cooper, Laurel D.;
    • Courtot, Mélanie;
    • Csösz, Sándor;
    • Cui, Hong;
    • Dahdul, Wasila;
    • Das, Sandip;
    • Dececchi, T. Alexander;
    • Dettai, Agnes;
    • Diogo, Rui;
    • Druzinsky, Robert E.
    Publication type:
    Opinion
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    3
    4

    modMine: flexible access to modENCODE data.

    Published in:
    Nucleic Acids Research, 2012, p. D1082, doi. 10.1093/nar/gkr921
    By:
    • Contrino, Sergio;
    • Smith, Richard N.;
    • Butano, Daniela;
    • Carr, Adrian;
    • Hu, Fengyuan;
    • Lyne, Rachel;
    • Rutherford, Kim;
    • Kalderimis, Alex;
    • Sullivan, Julie;
    • Carbon, Seth;
    • Kephart, Ellen T.;
    • Lloyd, Paul;
    • Stinson, E. O.;
    • Washington, Nicole L.;
    • Perry, Marc D.;
    • Ruzanov, Peter;
    • Zha, Zheng;
    • Lewis, Suzanna E.;
    • Stein, Lincoln D.;
    • Micklem, Gos
    Publication type:
    Article
    5
    6
    7

    Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome.

    Published in:
    Science Translational Medicine, 2014, v. 6, n. 252, p. 1, doi. 10.1126/scitranslmed.3009262
    By:
    • Zemojtel, Tomasz;
    • Köhler, Sebastian;
    • Mackenroth, Luisa;
    • Jäger, Marten;
    • Hecht, Jochen;
    • Krawitz, Peter;
    • Graul-Neumann, Luitgard;
    • Doelken, Sandra;
    • Ehmke, Nadja;
    • Spielmann, Malte;
    • Øien, Nancy Christine;
    • Schweiger, Michal R.;
    • Krüger, Ulrike;
    • Frommer, Götz;
    • Fischer, Björn;
    • Kornak, Uwe;
    • Flöttmann, Ricarda;
    • Ardeshirdavani, Amin;
    • Moreau, Yves;
    • Lewis, Suzanna E.
    Publication type:
    Article
    8
    9
    10

    Use of animal models for exome prioritization of rare disease genes

    Published in:
    Orphanet Journal of Rare Diseases, 2014, v. 9, n. 1, p. 1, doi. 10.1186/1750-1172-9-S1-O19
    By:
    • Smedley, Damian;
    • Kohler, Sebastian;
    • Bone, William;
    • Oellrich, Anika;
    • Jacobsen, Jules;
    • Genetics Project, Sanger Mouse;
    • Kai Wang;
    • Mungall, Chris;
    • Washington, Nicole;
    • Bauer, Sebastian;
    • Seelow, Dominic;
    • Krawitz, Peter;
    • Boerkel, Cornelius;
    • Gilissen, Christian;
    • Haendel, Melissa;
    • Lewis, Suzanna E;
    • Robinson, Peter N
    Publication type:
    Article
    11
    12

    Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon.

    Published in:
    Journal of Biomedical Semantics, 2014, v. 5, n. 1, p. 1, doi. 10.1186/2041-1480-5-21
    By:
    • Haendel, Melissa A.;
    • Balhoff, James P.;
    • Bastian, Frederic B.;
    • Blackburn, David C.;
    • Blake, Judith A.;
    • Bradford, Yvonne;
    • Comte, Aurelie;
    • Dahdul, Wasila M.;
    • Dececchi, Thomas A.;
    • Druzinsky, Robert E.;
    • Hayamizu, Terry F.;
    • Ibrahim, Nizar;
    • Lewis, Suzanna E.;
    • Mabee, Paula M.;
    • Niknejad, Anne;
    • Robinson-Rechavi, Marc;
    • Sereno, Paul C.;
    • Mungall, Christopher J.
    Publication type:
    Article
    13
    14
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    The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species.

    Published in:
    Nucleic Acids Research, 2017, v. 45, n. D1, p. D712, doi. 10.1093/nar/gkw1128
    By:
    • Mungall, Christopher J.;
    • McMurry, Julie A.;
    • Köhler3, Sebastian;
    • Balhoff, James P.;
    • Borromeo, Charles;
    • Brush, Matthew;
    • Carbon, Seth;
    • Conlin, Tom;
    • Dunn, Nathan;
    • Engelstad, Mark;
    • Foster, Erin;
    • Gourdine, J. P.;
    • Jacobsen, Julius O. B.;
    • Keith, Dan;
    • Laraway, Bryan;
    • Lewis, Suzanna E.;
    • NguyenXuan, Jeremy;
    • Shefchek, Kent;
    • Vasilevsky, Nicole;
    • Zhou Yuan
    Publication type:
    Article
    16

    JBrowse: a dynamic web platform for genome visualization and analysis.

    Published in:
    Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0924-1
    By:
    • Buels, Robert;
    • Yao, Eric;
    • Diesh, Colin M.;
    • Hayes, Richard D.;
    • Munoz-Torres, Monica;
    • Helt, Gregg;
    • Goodstein, David M.;
    • Elsik, Christine G.;
    • Lewis, Suzanna E.;
    • Stein, Lincoln;
    • Holmes, Ian H.
    Publication type:
    Article
    17

    Deletions of chromosomal regulatory boundaries are associated with congenital disease.

    Published in:
    Genome Biology, 2014, v. 15, n. 7, p. 423, doi. 10.1186/s13059-014-0423-1
    By:
    • Ibn-Salem, Jonas;
    • Köhler, Sebastian;
    • Love, Michael I.;
    • Ho-Ryun Chung;
    • Ni Huang;
    • Hurles, Matthew E.;
    • Haendel, Melissa;
    • Washington, Nicole L.;
    • Smedley, Damian;
    • Mungall, Christopher J.;
    • Lewis, Suzanna E.;
    • Ott, Claus-Eric;
    • Bauer, Sebastian;
    • Schofield, Paul N.;
    • Mundlos, Stefan;
    • Spielmann, Malte;
    • Robinson, Peter N.
    Publication type:
    Article
    18

    Web Apollo: a web-based genomic annotation editing platform.

    Published in:
    Genome Biology, 2013, v. 14, n. 8, p. R93, doi. 10.1186/gb-2013-14-8-r93
    By:
    • Eduardo Lee;
    • Helt, Gregg A;
    • Reese, Justin T;
    • Munoz-Torres, Monica C;
    • Childers, Chris P;
    • Buels, Robert M;
    • Stein, Lincoln;
    • Holmes, Ian H;
    • Elsik, Christine G;
    • Lewis, Suzanna E
    Publication type:
    Article
    19
    20

    Apollo: Democratizing genome annotation.

    Published in:
    PLoS Computational Biology, 2019, v. 15, n. 2, p. 1, doi. 10.1371/journal.pcbi.1006790
    By:
    • Dunn, Nathan A.;
    • Unni, Deepak R.;
    • Diesh, Colin;
    • Munoz-Torres, Monica;
    • Harris, Nomi L.;
    • Yao, Eric;
    • Rasche, Helena;
    • Holmes, Ian H.;
    • Elsik, Christine G.;
    • Lewis, Suzanna E.
    Publication type:
    Article
    21
    22

    OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.

    Published in:
    Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab069
    By:
    • Jackson, Rebecca;
    • Matentzoglu, Nicolas;
    • Overton, James A;
    • Vita, Randi;
    • Balhoff, James P;
    • Buttigieg, Pier Luigi;
    • Carbon, Seth;
    • Courtot, Melanie;
    • Diehl, Alexander D;
    • Dooley, Damion M;
    • Duncan, William D;
    • Harris, Nomi L;
    • Haendel, Melissa A;
    • Lewis, Suzanna E;
    • Natale, Darren A;
    • Osumi-Sutherland, David;
    • Ruttenberg, Alan;
    • Schriml, Lynn M;
    • Smith, Barry;
    • Stoeckert Jr., Christian J
    Publication type:
    Article
    23
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    27

    The RNA Ontology Consortium: An open invitation to the RNA community.

    Published in:
    Journal of Nuclear Medicine Technology, 2006, v. 34, n. 1, p. 1
    By:
    • Leontis, Neocles B.;
    • Altman, Russ B.;
    • Berman, Helen M.;
    • Brenner, Steven E.;
    • Brown, James W.;
    • Engelke, David R.;
    • Harvey, Stephen C.;
    • Holbrook, Stephen R.;
    • Jossinet, Fabrice;
    • Lewis, Suzanna E.;
    • Major, François;
    • Mathews, David H.;
    • Richardson, Jane S.;
    • Williamson, James R.;
    • Westhof, Eric
    Publication type:
    Article
    28

    Navigating the Phenotype Frontier: The Monarch Initiative.

    Published in:
    Genetics, 2016, v. 203, n. 4, p. 1491, doi. 10.1534/genetics.116.188870
    By:
    • McMurry, Julie A.;
    • Köhler, Sebastian;
    • Washington, Nicole L.;
    • Balhoff, James P.;
    • Borromeo, Charles;
    • Brush, Matthew;
    • Carbon, Seth;
    • Conlin, Tom;
    • Dunn, Nathan;
    • Engelstad, Mark;
    • Foster, Erin;
    • Gourdine, Jean-Philippe;
    • Jacobsen, Julius O. B.;
    • Keith, Daniel;
    • Laraway, Bryan;
    • Nguyen Xuan, Jeremy;
    • Shefchek, Kent;
    • Vasilevsky, Nicole A.;
    • Zhou Yuan;
    • Lewis, Suzanna E.
    Publication type:
    Article
    29