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Integrated genomic profiling identifies micro RNA-92a regulation of IQGAP2 in locally advanced rectal cancer.
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- Genes, Chromosomes & Cancer, 2016, v. 55, n. 4, p. 311, doi. 10.1002/gcc.22329
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Semi-supervised protein classification using cluster kernels.
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- Bioinformatics, 2005, v. 21, n. 15, p. 3241, doi. 10.1093/bioinformatics/bti497
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- Article
Predicting genetic regulatory response using classification.
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- Bioinformatics, 2004, v. 20, n. suppl_1, p. i232, doi. 10.1093/bioinformatics/bth923
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- Article
Protein backbone angle prediction with machine learning approaches.
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- Bioinformatics, 2004, v. 20, n. 10, p. 1612, doi. 10.1093/bioinformatics/bth136
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- Article
Mismatch string kernels for discriminative protein classification.
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- Bioinformatics, 2004, v. 20, n. 4, p. 467, doi. 10.1093/bioinformatics/btg431
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- Article
Predicting genetic regulatory response using classification.
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- Bioinformatics, 2004, v. 20, p. i232, doi. 10.1093/bioinformatics/bth923
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- Publication type:
- Article
RNA binding protein SYNCRIP maintains proteostasis and self-renewal of hematopoietic stem and progenitor cells.
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- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38001-x
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- Article
Regulation of arachidonic acid availability for eicosanoid production.
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- Biochemistry & Cell Biology, 2004, v. 82, n. 1, p. 1, doi. 10.1139/O03-080
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- Article
Serine hydrolase inhibitors block necrotic cell death by preventing calcium overload of the mitochondria and permeability transition pore formation (756.2).
- Published in:
- FASEB Journal, 2014, v. 28, p. N.PAG, doi. 10.1096/fasebj.28.1_supplement.756.2
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- Article
Cytosolic Phospholipase A<sub>2</sub> Activation by Candida albicans in Alveolar Macrophages Role of Dectin-1.
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- American Journal of Respiratory Cell & Molecular Biology, 2010, v. 42, n. 4, p. 415, doi. 10.1165/rcmb.2009-0110OC
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- Article
Role of Cytosolic Phospholipase A<sub>2</sub> in Prostaglandin E<sub>2</sub> Production by Lung Fibroblasts.
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- American Journal of Respiratory Cell & Molecular Biology, 2004, v. 30, n. 1, p. 91, doi. 10.1165/rcmb.2003-0005OC
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Group IVA phospholipase A<sub>2</sub> is necessary for growth cone repulsion and collapse.
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- Journal of Neurochemistry, 2012, v. 120, n. 6, p. 974, doi. 10.1111/j.1471-4159.2012.07651.x
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- Article
Learning Regulatory Programs That Accurately Predict Differential Expression with MEDUSA.
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- Annals of the New York Academy of Sciences, 2007, v. 1115, p. 178, doi. 10.1196/annals.1407.020
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- Article
Ets transcription factor GABP controls T cell homeostasis and immunity.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01020-6
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- Article
An integrated model for detecting significant chromatin interactions from high-resolution Hi-C data.
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- Nature Communications, 2017, v. 8, n. 5, p. 15454, doi. 10.1038/ncomms15454
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- Article
Pancancer modelling predicts the context-specific impact of somatic mutations on transcriptional programs.
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- Nature Communications, 2017, v. 8, n. 1, p. 14249, doi. 10.1038/ncomms14249
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- Article
Early enhancer establishment and regulatory locus complexity shape transcriptional programs in hematopoietic differentiation.
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- Nature Genetics, 2015, v. 47, n. 11, p. 1249, doi. 10.1038/ng.3402
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- Article
An allelic series of miR-17∼92-mutant mice uncovers functional specialization and cooperation among members of a microRNA polycistron.
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- Nature Genetics, 2015, v. 47, n. 7, p. 766, doi. 10.1038/ng.3321
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- Article
Corrigendum: A cooperative microRNA-tumor suppressor gene network in acute T-cell lymphoblastic leukemia (T-ALL).
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- 2011
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- Correction notice
A cooperative microRNA-tumor suppressor gene network in acute T-cell lymphoblastic leukemia (T-ALL).
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- Nature Genetics, 2011, v. 43, n. 7, p. 673, doi. 10.1038/ng.858
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- Article
Cytosolic phospholipase A<sub>2</sub> contributes to innate immune defense against Candida albicans lung infection.
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- BMC Immunology, 2016, v. 17, p. 1, doi. 10.1186/s12865-016-0165-9
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- Article
Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data.
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- PLoS Computational Biology, 2016, v. 12, n. 7, p. 1, doi. 10.1371/journal.pcbi.1005026
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- Article
PROFILE-BASED STRING KERNELS FOR REMOTE HOMOLOGY DETECTION AND MOTIF EXTRACTION.
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- Journal of Bioinformatics & Computational Biology, 2005, v. 3, n. 3, p. 527, doi. 10.1142/S021972000500120X
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- Article
Cross-talk between PRMT1-mediated methylation and ubiquitylation on RBM15 controls RNA splicing.
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- eLife, 2015, p. 1, doi. 10.7554/eLife.07938
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- Article
Widespread intronic polyadenylation diversifies immune cell transcriptomes.
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- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04112-z
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- Article
Prediction of potent shRNAs with a sequential classification algorithm.
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- Nature Biotechnology, 2017, v. 35, n. 4, p. 350, doi. 10.1038/nbt.3807
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- Article
GuideScan software for improved single and paired CRISPR guide RNA design.
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- Nature Biotechnology, 2017, v. 35, n. 4, p. 347, doi. 10.1038/nbt.3804
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- Article
Affinity regression predicts the recognition code of nucleic acid-binding proteins.
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- Nature Biotechnology, 2015, v. 33, n. 12, p. 1242, doi. 10.1038/nbt.3343
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- Article
Genomic safe harbors permit high β-globin transgene expression in thalassemia induced pluripotent stem cells.
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- Nature Biotechnology, 2011, v. 29, n. 1, p. 73, doi. 10.1038/nbt.1717
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- Article
Corrigendum: Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs.
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- 2009
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- Correction notice
KRAS mutant rectal cancer cells interact with surrounding fibroblasts to deplete the extracellular matrix.
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- Molecular Oncology, 2021, v. 15, n. 10, p. 2766, doi. 10.1002/1878-0261.12960
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- Article
Combining classifiers for improved classification of proteins from sequence or structure.
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- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-389
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- Article
NIPS workshop on New Problems and Methods in Computational Biology.
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- BMC Bioinformatics, 2007, v. 8, p. 1, doi. 10.1186/1471-2105-8-S10-S1
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- Article
Inhibition of the MEK1/ERK pathway reduces arachidonic acid release independently of cPLA<sub>2</sub> phosphorylation and translocation.
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- BMC Biochemistry, 2002, v. 3, p. 1
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- Article
SeqGL Identifies Context-Dependent Binding Signals in Genome-Wide Regulatory Element Maps.
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- PLoS Computational Biology, 2015, v. 11, n. 5, p. 1, doi. 10.1371/journal.pcbi.1004271
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- Article
Detecting Remote Evolutionary Relationships among Proteins by Large-Scale Semantic Embedding.
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- PLoS Computational Biology, 2011, v. 7, n. 1, p. 1, doi. 10.1371/journal.pcbi.1001047
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- Article
High Resolution Models of Transcription Factor-DNA Affinities Improve In Vitro and In Vivo Binding Predictions.
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- PLoS Computational Biology, 2010, v. 6, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000916
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- Article
Learning "graph-mer" Motifs that Predict Gene Expression Trajectories in Development.
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- PLoS Computational Biology, 2010, v. 6, n. 4, p. 1, doi. 10.1371/journal.pcbi.1000761
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- Article
A Predictive Model of the Oxygen and Heme Regulatory Network in Yeast.
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- PLoS Computational Biology, 2008, v. 4, n. 11, p. 1, doi. 10.1371/journal.pcbi.1000224
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- Article
Multi-class Protein Classification Using Adaptive Codes.
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- Journal of Machine Learning Research, 2007, v. 8, n. 7, p. 1557
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- Article
Fast String Kernels using Inexact Matching for Protein Sequences.
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- Journal of Machine Learning Research, 2004, v. 5, n. 9, p. 1435
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- Article
HiC-DC+ enables systematic 3D interaction calls and differential analysis for Hi-C and HiChIP.
- Published in:
- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-23749-x
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- Article
Cytosolic Phospholipase A<sub>2</sub>α and Eicosanoids Regulate Expression of Genes in Macrophages Involved in Host Defense and Inflammation.
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- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069002
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Determining Frequent Patterns of Copy Number Alterations in Cancer.
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- PLoS ONE, 2010, v. 5, n. 8, p. 1, doi. 10.1371/journal.pone.0012028
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- Article
Combining integrated genomics and functional genomics to dissect the biology of a cancer-associated, aberrant transcription factor, the ASPSCR1-TFE3 fusion oncoprotein Combining integrated genomics and functional genomics to dissect the biology of a cancer-associated, aberrant transcription factor, the ASPSCR1-TFE3 fusion oncoprotein
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- Journal of Pathology, 2013, v. 229, n. 5, p. 743, doi. 10.1002/path.4158
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- Article
Group IV Phospholipase A2a Controls the Formation of Inter-Cisternal Continuities Involved in Intra-Golgi Transport.
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- PLoS Biology, 2009, v. 7, n. 9, p. 1, doi. 10.1371/journal.pbio.1000194
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- Article
Activation of group IVC phospholipase A by polycyclic aromatic hydrocarbons induces apoptosis of human coronary artery endothelial cells.
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- Archives of Toxicology, 2011, v. 85, n. 6, p. 623, doi. 10.1007/s00204-010-0614-9
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- Article
Multitask learning improves prediction of cancer drug sensitivity.
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- Scientific Reports, 2016, p. 31619, doi. 10.1038/srep31619
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- Article
Analysis of tumour- and stroma-supplied proteolytic networks reveals a brain-metastasis-promoting role for cathepsin S.
- Published in:
- Nature Cell Biology, 2014, v. 16, n. 9, p. 876, doi. 10.1038/ncb3011
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COPI acts in both vesicular and tubular transport.
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- Nature Cell Biology, 2011, v. 13, n. 8, p. 996, doi. 10.1038/ncb2273
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- Article