Found: 57
Select item for more details and to access through your institution.
Bridging the gap between the evolutionary dynamics and the molecular mechanisms of meiosis: A model based exploration of the PRDM9 intra-genomic Red Queen.
- Published in:
- PLoS Genetics, 2024, v. 20, n. 5, p. 1, doi. 10.1371/journal.pgen.1011274
- By:
- Publication type:
- Article
Phylogenomic analysis of protein‐coding genes resolves complex gall wasp relationships.
- Published in:
- Systematic Entomology, 2024, v. 49, n. 1, p. 110, doi. 10.1111/syen.12611
- By:
- Publication type:
- Article
Compositionally Constrained Sites Drive Long-Branch Attraction.
- Published in:
- Systematic Biology, 2023, v. 72, n. 4, p. 767, doi. 10.1093/sysbio/syad013
- By:
- Publication type:
- Article
Identifying the Best Approximating Model in Bayesian Phylogenetics: Bayes Factors, Cross-Validation or wAIC?
- Published in:
- Systematic Biology, 2023, v. 72, n. 3, p. 616, doi. 10.1093/sysbio/syad004
- By:
- Publication type:
- Article
Improved Codon Modeling Approach for Accurate Estimation of the Mutation Bias.
- Published in:
- Molecular Biology & Evolution, 2022, v. 39, n. 2, p. 1, doi. 10.1093/molbev/msac005
- By:
- Publication type:
- Article
Natural Selection beyond Life? A Workshop Report.
- Published in:
- Life (2075-1729), 2021, v. 11, n. 10, p. 1051, doi. 10.3390/life11101051
- By:
- Publication type:
- Article
Inferring Long-Term Effective Population Size with Mutation–Selection Models.
- Published in:
- Molecular Biology & Evolution, 2021, v. 38, n. 10, p. 4573, doi. 10.1093/molbev/msab160
- By:
- Publication type:
- Article
Reconstructing the History of Variation in Effective Population Size along Phylogenies.
- Published in:
- Genome Biology & Evolution, 2021, v. 13, n. 8, p. 1, doi. 10.1093/gbe/evab150
- By:
- Publication type:
- Article
Erratum to: A Bayesian mutation-selection framework for detecting site-specific adaptive evolution in protein-coding genes.
- Published in:
- Molecular Biology & Evolution, 2021, v. 38, n. 7, p. 3032, doi. 10.1093/molbev/msab135
- By:
- Publication type:
- Article
Detecting sex-linked genes using genotyped individuals sampled in natural populations.
- Published in:
- Genetics, 2021, v. 218, n. 2, p. 1, doi. 10.1093/genetics/iyab053
- By:
- Publication type:
- Article
Publisher Correction: Universal probabilistic programming offers a powerful approach to statistical phylogenetics.
- Published in:
- 2021
- By:
- Publication type:
- Correction Notice
A Bayesian Mutation–Selection Framework for Detecting Site-Specific Adaptive Evolution in Protein-Coding Genes.
- Published in:
- Molecular Biology & Evolution, 2021, v. 38, n. 3, p. 1199, doi. 10.1093/molbev/msaa265
- By:
- Publication type:
- Article
Universal probabilistic programming offers a powerful approach to statistical phylogenetics.
- Published in:
- Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-01753-7
- By:
- Publication type:
- Article
Scalable Empirical Mixture Models That Account for Across-Site Compositional Heterogeneity.
- Published in:
- Molecular Biology & Evolution, 2020, v. 37, n. 12, p. 3616, doi. 10.1093/molbev/msaa145
- By:
- Publication type:
- Article
From Inquilines to Gall Inducers: Genomic Signature of a Life-Style Transition in Synergus Gall Wasps.
- Published in:
- Genome Biology & Evolution, 2020, v. 12, n. 11, p. 2060, doi. 10.1093/gbe/evaa204
- By:
- Publication type:
- Article
Life History Traits Impact the Nuclear Rate of Substitution but Not the Mitochondrial Rate in Isopods.
- Published in:
- Molecular Biology & Evolution, 2019, v. 36, n. 3, p. 641, doi. 10.1093/molbev/msy247
- By:
- Publication type:
- Article
Life History Traits Impact the Nuclear Rate of Substitution but Not the Mitochondrial Rate in Isopods.
- Published in:
- Molecular Biology & Evolution, 2018, v. 35, n. 12, p. 2900, doi. 10.1093/molbev/msy184
- By:
- Publication type:
- Article
Conditional Approximate Bayesian Computation: A New Approach for Across-Site Dependency in High-Dimensional Mutation–Selection Models.
- Published in:
- Molecular Biology & Evolution, 2018, v. 35, n. 11, p. 2819, doi. 10.1093/molbev/msy173
- By:
- Publication type:
- Article
Correction: Molecular adaptation in Rubisco: Discriminating between convergent evolution and positive selection using mechanistic and classical codon models.
- Published in:
- 2018
- By:
- Publication type:
- Correction Notice
Molecular adaptation in Rubisco: Discriminating between convergent evolution and positive selection using mechanistic and classical codon models.
- Published in:
- PLoS ONE, 2018, v. 13, n. 2, p. 1, doi. 10.1371/journal.pone.0192697
- By:
- Publication type:
- Article
Detecting consistent patterns of directional adaptation using differential selection codon models.
- Published in:
- BMC Evolutionary Biology, 2017, v. 17, p. 1, doi. 10.1186/s12862-017-0979-y
- By:
- Publication type:
- Article
Detecting Adaptation in Protein-Coding Genes Using a Bayesian Site-Heterogeneous Mutation-Selection Codon Substitution Model.
- Published in:
- Molecular Biology & Evolution, 2017, v. 34, n. 1, p. 204, doi. 10.1093/molbev/msw220
- By:
- Publication type:
- Article
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language.
- Published in:
- Systematic Biology, 2016, v. 65, n. 4, p. 726, doi. 10.1093/sysbio/syw021
- By:
- Publication type:
- Article
Monte Carlo algorithms for Brownian phylogenetic models.
- Published in:
- Bioinformatics, 2014, v. 30, n. 21, p. 3020, doi. 10.1093/bioinformatics/btu485
- By:
- Publication type:
- Article
The Red Queen Model of Recombination Hotspots Evolution in the Light of Archaic and Modern Human Genomes.
- Published in:
- PLoS Genetics, 2014, v. 10, n. 11, p. 1, doi. 10.1371/journal.pgen.1004790
- By:
- Publication type:
- Article
Site-heterogeneous mutation-selection models within the PhyloBayes-MPI package.
- Published in:
- Bioinformatics, 2014, v. 30, n. 7, p. 1020, doi. 10.1093/bioinformatics/btt729
- By:
- Publication type:
- Article
A phylogenetic Kalman filter for ancestral trait reconstruction using molecular data.
- Published in:
- Bioinformatics, 2014, v. 30, n. 4, p. 488, doi. 10.1093/bioinformatics/btt707
- By:
- Publication type:
- Article
Reconstructing the Phylogenetic History of Long-Term Effective Population Size and Life-History Traits Using Patterns of Amino Acid Replacement in Mitochondrial Genomes of Mammals and Birds.
- Published in:
- Genome Biology & Evolution, 2013, v. 5, n. 7, p. 1273, doi. 10.1093/gbe/evt083
- By:
- Publication type:
- Article
An Experimentally Tested Scenario for the Structural Evolution of Eukaryotic Cys2His2 Zinc Fingers from Eubacterial Ros Homologs.
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 7, p. 1504, doi. 10.1093/molbev/mst068
- By:
- Publication type:
- Article
PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment.
- Published in:
- Systematic Biology, 2013, v. 62, n. 4, p. 611, doi. 10.1093/sysbio/syt022
- By:
- Publication type:
- Article
Lateral Gene Transfer from the Dead.
- Published in:
- Systematic Biology, 2013, v. 62, n. 3, p. 386, doi. 10.1093/sysbio/syt003
- By:
- Publication type:
- Article
Phylogenetic Patterns of GC-Biased Gene Conversion in Placental Mammals and the Evolutionary Dynamics of Recombination Landscapes.
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 3, p. 489, doi. 10.1093/molbev/mss239
- By:
- Publication type:
- Article
Interaction between Selection and Biased Gene Conversion in Mammalian Protein-Coding Sequence Evolution Revealed by a Phylogenetic Covariance Analysis.
- Published in:
- Molecular Biology & Evolution, 2013, v. 30, n. 2, p. 356, doi. 10.1093/molbev/mss231
- By:
- Publication type:
- Article
Serine Codon-Usage Bias in Deep Phylogenomics: Pancrustacean Relationships as a Case Study.
- Published in:
- Systematic Biology, 2013, v. 62, n. 1, p. 121, doi. 10.1093/sysbio/sys077
- By:
- Publication type:
- Article
JOINT RECONSTRUCTION OF DIVERGENCE TIMES AND LIFE-HISTORY EVOLUTION IN PLACENTAL MAMMALS USING A PHYLOGENETIC COVARIANCE MODEL.
- Published in:
- Evolution, 2012, v. 66, n. 6, p. 1773, doi. 10.1111/j.1558-5646.2011.01558.x
- By:
- Publication type:
- Article
History Can Matter: Non-Markovian Behavior of Ancestral Lineages.
- Published in:
- Systematic Biology, 2011, v. 60, n. 3, p. 276, doi. 10.1093/sysbio/syr012
- By:
- Publication type:
- Article
A Phylogenetic Model for Investigating Correlated Evolution of Substitution Rates and Continuous Phenotypic Characters.
- Published in:
- Molecular Biology & Evolution, 2011, v. 28, n. 1, p. 729, doi. 10.1093/molbev/msq244
- By:
- Publication type:
- Article
Statistical Potentials for Improved Structurally Constrained Evolutionary Models.
- Published in:
- Molecular Biology & Evolution, 2010, v. 27, n. 7, p. 1546, doi. 10.1093/molbev/msq047
- By:
- Publication type:
- Article
A Dirichlet Process Covarion Mixture Model and Its Assessments Using Posterior Predictive Discrepancy Tests.
- Published in:
- Molecular Biology & Evolution, 2010, v. 27, n. 2, p. 371, doi. 10.1093/molbev/msp248
- By:
- Publication type:
- Article
PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating.
- Published in:
- Bioinformatics, 2009, v. 25, n. 17, p. 2286, doi. 10.1093/bioinformatics/btp368
- By:
- Publication type:
- Article
ComputationalMethods for Evaluating PhylogeneticModels of Coding Sequence Evolution with Dependence between Codons.
- Published in:
- Molecular Biology & Evolution, 2009, v. 26, n. 7, p. 1663, doi. 10.1093/molbev/msp078
- By:
- Publication type:
- Article
Parallel adaptations to high temperatures in the Archaean eon.
- Published in:
- 2008
- By:
- Publication type:
- Letter
Bayesian Comparisons of Codon Substitution Models.
- Published in:
- Genetics, 2008, v. 180, n. 3, p. 1579, doi. 10.1534/genetics.108.092254
- By:
- Publication type:
- Article
Empirical profile mixture models for phylogenetic reconstruction.
- Published in:
- Bioinformatics, 2008, v. 24, n. 20, p. 2317, doi. 10.1093/bioinformatics/btn445
- By:
- Publication type:
- Article
A Site- and Time-Heterogeneous Model of Amino Acid Replacement.
- Published in:
- Molecular Biology & Evolution, 2008, v. 25, n. 5, p. 842, doi. 10.1093/molbev/msn018
- By:
- Publication type:
- Article
Uniformization for sampling realizations of Markov processes: applications to Bayesian implementations of codon substitution models.
- Published in:
- Bioinformatics, 2008, v. 24, n. 1, p. 56, doi. 10.1093/bioinformatics/btm532
- By:
- Publication type:
- Article
A General Comparison of Relaxed Molecular Clock Models.
- Published in:
- Molecular Biology & Evolution, 2007, v. 24, n. 12, p. 2669, doi. 10.1093/molbev/msm193
- By:
- Publication type:
- Article
Exploring Fast Computational Strategies for Probabilistic Phylogenetic Analysis.
- Published in:
- Systematic Biology, 2007, v. 56, n. 5, p. 711, doi. 10.1080/10635150701611258
- By:
- Publication type:
- Article
Detecting and Overcoming Systematic Errors in Genome-Scale Phylogenies.
- Published in:
- Systematic Biology, 2007, v. 56, n. 3, p. 389, doi. 10.1080/10635150701397643
- By:
- Publication type:
- Article
Evaluation of the models handling heterotachy in phylogenetic inference.
- Published in:
- BMC Evolutionary Biology, 2007, v. 7, p. 206, doi. 10.1186/1471-2148-7-206
- By:
- Publication type:
- Article