Works by Langfelder, Peter

Results: 23

Decreased but persistent epigenetic age acceleration is associated with changes in T-cell subsets after initiation of highly active antiretroviral therapy in persons living with HIV.

Published in:

Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1356509

By:

Sehl, Mary E.;
Breen, Elizabeth Crabb;
Shih, Roger;
Fengxue Li;
Zhang, Joshua;
Langfelder, Peter;
Horvath, Steve;
Bream, Jay H.;
Duggal, Priya;
Martinson, Jeremy;
Wolinsky, Steven M.;
Martinez-Maza, Otoniel;
Ramirez, Christina M.;
Jamieson, Beth D.

Publication type:

Article

MicroRNA signatures of endogenous Huntingtin CAG repeat expansion in mice.

Published in:

PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0190550

By:

Langfelder, Peter;
Gao, Fuying;
Wang, Nan;
Howland, David;
Kwak, Seung;
Vogt, Thomas F.;
Aaronson, Jeffrey S.;
Rosinski, Jim;
Coppola, Giovanni;
Horvath, Steve;
Yang, X. William

Publication type:

Article

Titanium biomaterials with complex surfaces induced aberrant peripheral circadian rhythms in bone marrow mesenchymal stromal cells.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183359

By:

Hassan, Nathaniel;
McCarville, Kirstin;
Morinaga, Kenzo;
Mengatto, Cristiane M.;
Langfelder, Peter;
Hokugo, Akishige;
Tahara, Yu;
Colwell, Christopher S.;
Nishimura, Ichiro

Publication type:

Article

Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R.

Published in:

Bioinformatics, 2008, v. 24, n. 5, p. 719, doi. 10.1093/bioinformatics/btm563

By:

Peter Langfelder;
Bin Zhang;
Steve Horvath

Publication type:

Article

Functional organization of the transcriptome in human brain.

Published in:

Nature Neuroscience, 2008, v. 11, n. 11, p. 1271, doi. 10.1038/nn.2207

By:

Oldham, Michael C.;
Konopka, Genevieve;
Iwamoto, Kazuya;
Langfelder, Peter;
Kato, Tadafumi;
Horvath, Steve;
Geschwind, Daniel H.

Publication type:

Article

No reliable gene expression biomarkers of current or impending neurocognitive impairment in peripheral blood monocytes of persons living with HIV.

Published in:

Journal of NeuroVirology, 2018, v. 24, n. 3, p. 350, doi. 10.1007/s13365-018-0625-5

By:

Quach, Austin;
Horvath, Steve;
Nemanim, Natasha;
Vatakis, Dimitrios;
Witt, Mallory D.;
Miller, Eric N.;
Detels, Roger;
Langfelder, Peter;
Shapshak, Paul;
Singer, Elyse J.;
Levine, Andrew J.

Publication type:

Article

Exosomes and Homeostatic Synaptic Plasticity Are Linked to Each other and to Huntington's, Parkinson's, and Other Neurodegenerative Diseases by Database-Enabled Analyses of Comprehensively Curated Datasets.

Published in:

Frontiers in Neuroscience, 2017, v. 11, p. 1, doi. 10.3389/fnins.2017.00149

By:

Wang, James K. T.;
Langfelder, Peter;
Horvath, Steve;
Palazzolo, Michael J.

Publication type:

Article

Cluster and propensity based approximation of a network.

Published in:

BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-21

By:

Ranola, John Michael;
Langfelder, Peter;
Lange, Kenneth;
Horvath, Steve

Publication type:

Article

Network methods for describing sample relationships in genomic datasets: application to Huntington's disease.

Published in:

BMC Systems Biology, 2012, v. 6, n. 1, p. 63, doi. 10.1186/1752-0509-6-63

By:

Oldham, Michael C.;
Langfelder, Peter;
Horvath, Steve

Publication type:

Article

Gene networks associated with conditional fear in mice identified using a systems genetics approach.

Published in:

BMC Systems Biology, 2011, v. 5, n. 1, p. 43, doi. 10.1186/1752-0509-5-43

By:

Park, Christopher C.;
Gale, Greg D.;
Jong, Simone de;
Ghazalpour, Anatole;
Bennett, Brian J.;
Farber, Charles R.;
Langfelder, Peter;
Lin, Andy;
Khan, Arshad H.;
Eskin, Eleazar;
Horvath, Steve;
Lusis, Aldons J.;
Ophoff, Roel A.;
Smith, Desmond J.

Publication type:

Article

Eigengene networks for studying the relationships between co-expression modules.

Published in:

BMC Systems Biology, 2007, v. 1, p. 54, doi. 10.1186/1752-0509-1-54

By:

Langfelder, Peter;
Horvath, Steve

Publication type:

Article

Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 636, doi. 10.1186/1471-2164-13-636

By:

van Eijk, Kristel R.;
de Jong, Simone;
Boks, Marco P. M.;
Langeveld, Terry;
Colas, Fabrice;
Veldink, Jan H.;
de Kovel, Carolien G. F.;
Janson, Esther;
Strengman, Eric;
Langfelder, Peter;
Kahn, Ren� S.;
van den Berg, Leonard H.;
Horvath, Steve;
Ophoff, Roel A.

Publication type:

Article

Random generalized linear model: a highly accurate and interpretable ensemble predictor.

Published in:

BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-5

By:

Lin Song;
Langfelder, Peter;
Horvath, Steve

Publication type:

Article

Comparison of co-expression measures: mutual information, correlation, and model based indices.

Published in:

BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-328

By:

Lin Song;
Langfelder, Peter;
Horvath, Steve

Publication type:

Article

Is My Network Module Preserved and Reproducible?

Published in:

PLoS Computational Biology, 2011, v. 7, n. 1, p. 1, doi. 10.1371/journal.pcbi.1001057

By:

Langfelder, Peter;
Luo, Rui;
Oldham, Michael C.;
Horvath, Steve

Publication type:

Article

Aging effects on DNA methylation modules in human brain and blood tissue.

Published in:

Genome Biology, 2012, v. 13, n. 10, p. r97, doi. 10.1186/gb-2012-13-10-r97

By:

Horvath, Steve;
Yafeng Zhang;
Langfelder, Peter;
Kahn, René S.;
Boks, Marco P.M.;
van Eijk, Kristel;
van den Berg, Leonard H.;
Ophoff, Roel A.

Publication type:

Article

Weighted Gene Coexpression Network Analysis: State of the Art.

Published in:

Journal of Biopharmaceutical Statistics, 2010, v. 20, n. 2, p. 281, doi. 10.1080/10543400903572753

By:

Zhao, Wei;
Langfelder, Peter;
Fuller, Tova;
Dong, Jun;
Li, Ai;
Hovarth, Steve

Publication type:

Article

Disease-related Huntingtin seeding activities in cerebrospinal fluids of Huntington's disease patients.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-77164-1

By:

Lee, C. Y. Daniel;
Wang, Nan;
Shen, Koning;
Stricos, Matthew;
Langfelder, Peter;
Cheon, Kristina H.;
Cortés, Etty P.;
Vinters, Harry V.;
Vonsattel, Jean Paul;
Wexler, Nancy S.;
Damoiseaux, Robert;
Frydman, Judith;
Yang, X. William

Publication type:

Article

DNA methylation study of Huntington's disease and motor progression in patients and in animal models.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18255-5

By:

Lu, Ake T.;
Narayan, Pritika;
Grant, Matthew J.;
Langfelder, Peter;
Wang, Nan;
Kwak, Seung;
Wilkinson, Hilary;
Chen, Richard Z.;
Chen, Jian;
Simon Bawden, C.;
Rudiger, Skye R.;
Ciosi, Marc;
Chatzi, Afroditi;
Maxwell, Alastair;
Hore, Timothy A.;
Aaronson, Jeff;
Rosinski, Jim;
Preiss, Alicia;
Vogt, Thomas F.;
Coppola, Giovanni

Publication type:

Article

When Is Hub Gene Selection Better than Standard Meta-Analysis?

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0061505

By:

Langfelder, Peter;
Mischel, Paul S.;
Horvath, Steve

Publication type:

Article

Is human blood a good surrogate for brain tissue in transcriptional studies?

Published in:

BMC Genomics, 2010, v. 11, n. 1, p. 1, doi. 10.1186/1471-2164-11-589

By:

Cai, Chaochao;
Langfelder, Peter;
Fuller, Tova F;
Oldham, Michael C;
Luo, Rui;
van den Berg, Leonard H;
Ophoff, Roel A;
Horvath, Steve

Publication type:

Article

Is human blood a good surrogate for brain tissue in transcriptional studies?

Published in:

2010

By:

Chaochao Cai;
Langfelder, Peter;
Fuller, Tova F.;
Oldham, Michael C.;
Rui Luo;
van den Berg, Leonard H.;
Ophoff, Roel A.;
Horvath, Steve

Publication type:

Bibliography

Weighted gene co-expression network analysis of the peripheral blood from Amyotrophic Lateral Sclerosis patients.

Published in:

BMC Genomics, 2009, v. 10, p. 405, doi. 10.1186/1471-2164-10-405

By:

Saris, Christiaan G. J.;
Horvath, Steve;
van Vught, Paul W. J.;
van Es, Michael A.;
Blauw, Hylke M.;
Fuller, Tova F.;
Langfelder, Peter;
DeYoung, Joseph;
Wokke, John H. J.;
Veldink, Jan H.;
van den Berg, Leonard H.;
Ophoff, Roel A.

Publication type:

Article