OpenURL Connection Search

Select item for more details and to access through your institution.

MNBC: a multithreaded Minimizer-based Naïve Bayes Classifier for improved metagenomic sequence classification.
Published in:
Bioinformatics, 2024, v. 40, n. 10, p. 1, doi. 10.1093/bioinformatics/btae601
By:
- Lu, Ruipeng;
- Dumonceaux, Tim;
- Anzar, Muhammad;
- Zovoilis, Athanasios;
- Antonation, Kym;
- Barker, Dillon;
- Corbett, Cindi;
- Nadon, Celine;
- Robertson, James;
- Eagle, Shannon H C;
- Lung, Oliver;
- Rudar, Josip;
- Surujballi, Om;
- Laing, Chad
Publication type:
Article
Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress.
Published in:
Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00369
By:
- Hingston, Patricia;
- Chen, Jessica;
- Dhillon, Bhavjinder K.;
- Laing, Chad;
- Bertelli, Claire;
- Gannon, Victor;
- Tasara, Taurai;
- Allen, Kevin;
- Brinkman, Fiona S. L.;
- Hansen, Lisbeth Truelstrup;
- Siyun Wang
Publication type:
Article
SuperPhy: predictive genomics for the bacterial pathogen Escherichia coli.
Published in:
BMC Microbiology, 2016, v. 16, p. 1, doi. 10.1186/s12866-016-0680-0
By:
- Whiteside, Matthew D.;
- Laing, Chad R.;
- Manji, Akiff;
- Kruczkiewicz, Peter;
- Taboada, Eduardo N.;
- Gannon, Victor P. J.
Publication type:
Article
Antibiotic Resistance in Shiga Toxigenic Escherichia coli Isolates from Surface Waters and Sediments in a Mixed Use Urban Agricultural Landscape.
Published in:
Antibiotics (2079-6382), 2021, v. 10, n. 3, p. 237, doi. 10.3390/antibiotics10030237
By:
- Ma, Yvonne;
- Chen, Jessica;
- Fong, Karen;
- Nadya, Stephanie;
- Allen, Kevin;
- Laing, Chad;
- Ziebell, Kim;
- Topp, Ed;
- Carroll, Laura M.;
- Wiedmann, Martin;
- Delaquis, Pascal;
- Wang, Siyun;
- Pruess, Birgit
Publication type:
Article
Phenotypic and Genotypic Characteristics of Shiga Toxin-Producing Escherichia coli Isolated from Surface Waters and Sediments in a Canadian Urban-Agricultural Landscape.
Published in:
Frontiers in Cellular & Infection Microbiology, 2016, v. 6, p. 1, doi. 10.3389/fcimb.2016.00036
By:
- Nadya, Stephanie;
- Chen, Jessica;
- Allen, Kevin;
- Johnson, Roger P.;
- Ziebell, Kim;
- Laing, Chad;
- Gannon, Victor;
- Bach, Susan;
- Topp, Edward;
- Delaquis, Pascal
Publication type:
Article
Spatial and Temporal Drivers of Zoonotic Pathogen Contamination of an Agricultural Watershed.
Published in:
Journal of Environmental Quality, 2012, v. 41, n. 1, p. 242, doi. 10.2134/jeq2011.0203
By:
- Jokinen, Cassandra C.;
- Edge, Thomas A.;
- Koning, Wendell;
- Laing, Chad R.;
- Lapen, David R.;
- Miller, Jim;
- Mutschall, Steven;
- Scott, Andrew;
- Taboada, Eduardo N.;
- Thomas, James E.;
- Topp, Edward;
- Wilkes, Graham;
- Gannon, Victor P. J.
Publication type:
Article
Whole Genome Sequencing demonstrates that Geographic Variation of Escherichia coli O157 Genotypes Dominates Host Association.
Published in:
Scientific Reports, 2015, p. 1, doi. 10.1038/srep14145
By:
- Strachan, Norval J. C.;
- Rotariu, Ovidiu;
- Lopes, Bruno;
- MacRae, Marion;
- Fairley, Susan;
- Laing, Chad;
- Gannon, Victor;
- Allison, Lesley J.;
- Hanson, Mary F.;
- Dallman, Tim;
- Ashton, Philip;
- Franz, Eelco;
- van Hoek, Angela H. A. M.;
- French, Nigel P.;
- George, Tessy;
- Biggs, Patrick J.;
- Forbes, Ken J.
Publication type:
Article
A Comparison of Shiga-Toxin 2 Bacteriophage from Classical Enterohemorrhagic Escherichia coli Serotypes and the German E. coli O104:H4 Outbreak Strain.
Published in:
PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0037362
By:
- Laing, Chad R.;
- Yongxiang Zhang;
- Gilmour, Matthew W.;
- Allen, Vanessa;
- Johnson, Roger;
- Thomas, James E.;
- Gannon, Victor P. J.
Publication type:
Article
Decontamination of Bacillus anthracis Spores at Subzero Temperatures by Complete Submersion.
Published in:
Applied Biosafety: Journal of the American Biological Safety Association, 2021, v. 26, n. 1, p. 6, doi. 10.1089/apb.20.0067
By:
- Laing, Chad;
- Janzen, Timothy;
- Blinov, Vladimir;
- Volchek, Konstantin;
- Goji, Noriko;
- Thomas, Matthew;
- Telfer, Melissa;
- Rohonczy, Elizabeth;
- Amoako, Kingsley K.
Publication type:
Article
Identification of a novel prophage regulator in Escherichia coli controlling the expression of type III secretion.
Published in:
Molecular Microbiology, 2012, v. 83, n. 1, p. 208, doi. 10.1111/j.1365-2958.2011.07927.x
By:
- Flockhart, Allen F.;
- Tree, Jai J.;
- Xu, Xuefang;
- Karpiyevich, Maryia;
- McAteer, Sean P.;
- Rosenblum, Ronen;
- Shaw, Darren J.;
- Low, Christopher J.;
- Best, Angus;
- Gannon, Victor;
- Laing, Chad;
- Murphy, Kenan C.;
- Leong, John M.;
- Schneiders, Thamarai;
- La Ragione, Roberto;
- Gally, David L.
Publication type:
Article
Spfy: an integrated graph database for real-time prediction of bacterial phenotypes and downstream comparative analyses.
Published in:
Database: The Journal of Biological Databases & Curation, 2018, v. 2018, p. 1, doi. 10.1093/database/bay086
By:
- Le, Kevin K;
- Whiteside, Matthew D;
- Hopkins, James E;
- Gannon, Victor P J;
- Laing, Chad R
Publication type:
Article
Two distinct groups of porcine enteropathogenic Escherichia coli strains of serogroup O45 are revealed by comparative genomic hybridization and virulence gene microarray.
Published in:
BMC Genomics, 2009, v. 10, p. 402, doi. 10.1186/1471-2164-10-402
By:
- Bruant, Guillaume;
- Yongxiang Zhang;
- Garneau, Philippe;
- Wong, Justin;
- Laing, Chad;
- Fairbrother, John M.;
- Gannon, Victor P. J.;
- Harel, Josée
Publication type:
Article
In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence.
Published in:
BMC Genomics, 2009, v. 10, p. 287, doi. 10.1186/1471-2164-10-287
By:
- Laing, Chad R.;
- Buchanan, Cody;
- Taboada, Eduardo N.;
- Yongxiang Zhang;
- Karmali, Mohamed A.;
- Thomas, James E.;
- Gannon, Victor P. J.
Publication type:
Article
Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions.
Published in:
BMC Bioinformatics, 2010, v. 11, p. 461, doi. 10.1186/1471-2105-11-461
By:
- Laing, Chad;
- Buchanan, Cody;
- Taboada, Eduardo N.;
- Yongxiang Zhang;
- Kropinski, Andrew;
- Villegas, Andre;
- Thomas, James E.;
- Gannon, Victor P. J.
Publication type:
Article
Genomic Analysis of Shiga Toxin-Producing E. coli O157 Cattle and Clinical Isolates from Alberta, Canada.
Published in:
Toxins, 2022, v. 14, n. 9, p. 603, doi. 10.3390/toxins14090603
By:
- Bumunang, Emmanuel W.;
- Zaheer, Rahat;
- Stanford, Kim;
- Laing, Chad;
- Niu, Dongyan;
- Guan, Le Luo;
- Chui, Linda;
- Tarr, Gillian A. M.;
- McAllister, Tim A.
Publication type:
Article
Reply to Baba and Kanamori.
Published in:
2020
By:
- Franz, Eelco;
- Rotariu, Ovidiu;
- Lopes, Bruno S;
- Bono, James L;
- Laing, Chad;
- Gannon, Victor;
- Hoek, Angela H A M Van;
- Friesema, Ingrid;
- French, Nigel P;
- George, Tessy;
- Biggs, Patrick J;
- Jaros, Patricia;
- Rivas, Marta;
- Chinen, Isabel;
- Campos, Josefina;
- Mellor, Glen E;
- Chandry, P Scott;
- Perez-Reche, Francisco;
- Forbes, Ken J;
- Strachan, Norval Jc
Publication type:
Letter to the Editor
Phylogeographic Analysis Reveals Multiple International transmission Events Have Driven the Global Emergence of Escherichia coli O157:H7.
Published in:
Clinical Infectious Diseases, 2019, v. 69, n. 3, p. 428, doi. 10.1093/cid/ciy919
By:
- Franz, Eelco;
- Rotariu, Ovidiu;
- Lopes, Bruno S;
- MacRae, Marion;
- Bono, James L;
- Laing, Chad;
- Gannon, Victor;
- Söderlund, Robert;
- Hoek, Angela H A M van;
- Friesema, Ingrid;
- French, Nigel P;
- George, Tessy;
- Biggs, Patrick J;
- Jaros, Patricia;
- Rivas, Marta;
- Chinen, Isabel;
- Campos, Josefina;
- Jernberg, Cecilia;
- Gobius, Kari;
- Mellor, Glen E
Publication type:
Article
Multi-Year Persistence of Verotoxigenic Escherichia coli (VTEC) in a Closed Canadian Beef Herd: A Cohort Study.
Published in:
Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.02040
By:
- Wang, Lu Ya Ruth;
- Jokinen, Cassandra C.;
- Laing, Chad R.;
- Johnson, Roger P.;
- Ziebell, Kim;
- Gannon, Victor P. J.
Publication type:
Article
Pan-genome Analyses of the Species Salmonella enterica, and Identification of Genomic Markers Predictive for Species, Subspecies, and Serovar.
Published in:
Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01345
By:
- Laing, Chad R.;
- Whiteside, Matthew D.;
- Gannon, Victor P. J.
Publication type:
Article
Comparative Genomic Analysis of Escherichia coli O157:H7 Isolated from Super-Shedder and Low-Shedder Cattle.
Published in:
PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0151673
By:
- Munns, Krysty D.;
- Zaheer, Rahat;
- Xu, Yong;
- Stanford, Kim;
- Laing, Chad R.;
- Gannon, Victor P. J.;
- Selinger, L. Brent;
- McAllister, Tim A.
Publication type:
Article
Comparative Genomic Analysis of Mannheimia haemolytica from Bovine Sources.
Published in:
PLoS ONE, 2016, v. 11, n. 2, p. 1, doi. 10.1371/journal.pone.0149520
By:
- Klima, Cassidy L.;
- Cook, Shaun R.;
- Zaheer, Rahat;
- Laing, Chad;
- Gannon, Vick P.;
- Xu, Yong;
- Rasmussen, Jay;
- Potter, Andrew;
- Hendrick, Steve;
- Alexander, Trevor W.;
- McAllister, Tim A.
Publication type:
Article
The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies.
Published in:
PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0147101
By:
- Yoshida, Catherine E.;
- Kruczkiewicz, Peter;
- Laing, Chad R.;
- Lingohr, Erika J.;
- Gannon, Victor P. J.;
- Nash, John H. E.;
- Taboada, Eduardo N.
Publication type:
Article
Phylotyper: in silico predictor of gene subtypes.
Published in:
Bioinformatics, 2017, v. 33, n. 22, p. 3638, doi. 10.1093/bioinformatics/btx459
By:
- Whiteside, Matthew D.;
- Gannon, Victor P. J.;
- Laing, Chad R.
Publication type:
Article
Characteristics of Clinical Shiga Toxin-Producing Escherichia coli Isolated from British Columbia.
Published in:
BioMed Research International, 2013, v. 2013, p. 1, doi. 10.1155/2013/878956
By:
- Allen, Kevin J.;
- Laing, Chad R.;
- Cancarevic, Ana;
- Yongxiang Zhang;
- Mesak, Lili R.;
- Hai Xu;
- Paccagnella, Ana;
- Gannon, Victor P. J.;
- Hoang, Linda
Publication type:
Article
Commensal Escherichia coli Strains of Bovine Origin Competitively Mitigated Escherichia coli O157:H7 in a Gnotobiotic Murine Intestinal Colonization Model with or without Physiological Stress.
Published in:
Animals (2076-2615), 2023, v. 13, n. 16, p. 2577, doi. 10.3390/ani13162577
By:
- Lange, Maximo E.;
- Clarke, Sandra T.;
- Boras, Valerie F.;
- Brown, Catherine L. J.;
- Zhang, Guangzhi;
- Laing, Chad R.;
- Uwiera, Richard R. E.;
- Montina, Tony;
- Kalmokoff, Martin L.;
- Taboada, Eduardo N.;
- Gannon, Victor P. J.;
- Metz, Gerlinde A. S.;
- Church, John S.;
- Inglis, G. Douglas
Publication type:
Article

Found: 25