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GEGA (Gallus Enriched Gene Annotation): an online tool providing genomics and functional information across 47 tissues for a chicken gene-enriched atlas gathering Ensembl and Refseq genome annotations.
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- NAR Genomics & Bioinformatics, 2024, v. 6, n. 3, p. 1, doi. 10.1093/nargab/lqae101
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- Article
Analysis of Allele-Specific Expression in Mouse Liver by RNA-Seq: A Comparison With Cis-eQTL Identified Using Genetic Linkage.
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- Genetics, 2013, v. 195, n. 3, p. 1157, doi. 10.1534/genetics.113.153882
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- Article
Limited RNA Editing in Exons of Mouse Liver and Adipose.
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- Genetics, 2013, v. 193, n. 4, p. 1107, doi. 10.1534/genetics.112.149054
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- Article
The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3.
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- G3: Genes | Genomes | Genetics, 2016, v. 6, n. 2, p. 321, doi. 10.1534/g3.115.022251
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- Article
Expanding Duplication of Free Fatty Acid Receptor-2 (GPR43) Genes in the Chicken Genome.
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- Genome Biology & Evolution, 2015, v. 7, n. 5, p. 1332, doi. 10.1093/gbe/evv072
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- Article
32 Functional annotation of livestock genomes: chromatin structure and regulation of gene expression.
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- Journal of Animal Science, 2019, v. 97, p. 15, doi. 10.1093/jas/skz122.028
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- Article
Transcriptome-wide investigation of genomic imprinting in chicken.
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- Nucleic Acids Research, 2014, v. 42, n. 6, p. 3768, doi. 10.1093/nar/gkt1390
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- Article
Using a large-scale knowledge database on reactions and regulations to propose key upstream regulators of various sets of molecules participating in cell metabolism.
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- BMC Systems Biology, 2014, v. 8, n. 1, p. 1, doi. 10.1186/1752-0509-8-32
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- Article
LncRNAs in domesticated animals: from dog to livestock species.
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- Mammalian Genome, 2022, v. 33, n. 2, p. 248, doi. 10.1007/s00335-021-09928-7
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- Article
Long noncoding RNAs in lipid metabolism: literature review and conservation analysis across species.
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- BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6093-3
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- Article
Long noncoding RNA repertoire in chicken liver and adipose tissue.
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- Genetics Selection Evolution, 2017, v. 49, p. 1, doi. 10.1186/s12711-016-0275-0
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- Article
Genome-wide interval mapping using SNPs identifies new QTL for growth, body composition and several physiological variables in an F<sub>2</sub> intercross between fat and lean chicken lines.
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- Genetics Selection Evolution, 2013, v. 45, p. 1, doi. 10.1186/1297-9686-45-36
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- Article
A transcriptome multi-tissue analysis identifies biological pathways and genes associated with variations in feed efficiency of growing pigs.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3639-0
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- Article
Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2661-y
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- Article
Molecular alterations induced by a high-fat high-fiber diet in porcine adipose tissues: variations according to the anatomical fat location.
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- BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2438-3
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- Article
A factor model to analyze heterogeneity in geneexpression.
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- BMC Bioinformatics, 2010, v. 11, p. 368, doi. 10.1186/1471-2105-11-368
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- Article
Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates.
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- PLoS ONE, 2015, v. 10, n. 5, p. 1, doi. 10.1371/journal.pone.0126776
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- Article
Re-Sequencing Data for Refining Candidate Genes and Polymorphisms in QTL Regions Affecting Adiposity in Chicken.
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- PLoS ONE, 2014, v. 9, n. 10, p. 1, doi. 10.1371/journal.pone.0111299
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- Article
Detection of a Cis eQTL Controlling BMCO1 Gene Expression Leads to the Identification of a QTG for Chicken Breast Meat Color.
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- PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0014825
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- Article
Detection of Turkey, Duck, and Guinea Fowl Egg in Hen Egg Products by Species-Specific PCR.
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- Food Analytical Methods, 2009, v. 2, n. 3, p. 231, doi. 10.1007/s12161-009-9077-0
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- Article
The Loss of Adipokine Genes in the Chicken Genome and Implications for Insulin Metabolism.
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- Molecular Biology & Evolution, 2014, v. 31, n. 10, p. 2637
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- Article
Watch Out for a Second SNP: Focus on Multi-Nucleotide Variants in Coding Regions and Rescued Stop-Gained.
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- Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.659287
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- Article
Variant calling and genotyping accuracy of ddRAD-seq: Comparison with 20X WGS in layers.
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- PLoS ONE, 2024, v. 19, n. 7, p. 1, doi. 10.1371/journal.pone.0298565
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- Article
Expression of c- fos and jun protooncogenes in ovine trophoblasts in relation to interferon-tau expression and early implantation process.
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- Molecular Reproduction & Development, 1997, v. 46, n. 2, p. 127, doi. 10.1002/(SICI)1098-2795(199702)46:2<127::AID-MRD3>3.0.CO;2-S
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- Article
Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues.
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- 2021
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- Correction Notice
An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues.
- Published in:
- Scientific Reports, 2020, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41598-020-77586-x
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- Article
Erratum: Hepatic circadian clock oscillators and nuclear receptors integrate microbiome-derived signals.
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- Scientific Reports, 2016, p. 23951, doi. 10.1038/srep23951
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- Article
Hepatic circadian clock oscillators and nuclear receptors integrate microbiome-derived signals.
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- Scientific Reports, 2016, p. 20127, doi. 10.1038/srep20127
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- Article
Pathway results from the chicken data set using GOTM, Pathway Studio and Ingenuity softwares.
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- BMC Proceedings, 2009, v. 3, p. 1, doi. 10.1186/1753-6561-3-S4-S11
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- Article
sigReannot: an oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters.
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- BMC Proceedings, 2009, v. 3, p. 1, doi. 10.1186/1753-6561-3-S4-S3
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- Article
Methods for interpreting lists of affected genes obtained in a DNA microarray experiment.
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- BMC Proceedings, 2009, v. 3, p. 1, doi. 10.1186/1753-6561-3-S4-S5
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- Article
Using transcriptome profiling to characterize QTL regions on chicken chromosome 5.
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- BMC Genomics, 2009, v. 10, p. 575, doi. 10.1186/1471-2164-10-575
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- Article
A high-resolution radiation hybrid map of chicken chromosome 5 and comparison with human chromosomes.
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- BMC Genomics, 2004, v. 5, p. 66, doi. 10.1186/1471-2164-5-66
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- Article