Works matching AU Labadorf, Adam

Results: 28

Identification of differentially expressed genes in post‐mortem tissue from African American Alzheimer disease cases and controls.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.091575

By:

Logue, Mark W.;
Labadorf, Adam Thomas;
O'Neill, Nicholas K;
Dickson, Dennis W.;
Flanagan, Margaret E;
Franklin, Erin E.;
Frosch, Matt P.;
Gearing, Marla;
Jin, Lee‐Way;
Kofler, Julia;
Lee, Eddie B;
Mayeux, Richard;
McKee, Ann C.;
Miller, Carol A;
Murray, Melissa E.;
Nelson, Peter T;
Perrin, Richard J.;
Schneider, Julie A.;
Stein, Thor D.;
Teich, Andrew F

Publication type:

Article

The caudate nucleus undergoes dramatic and unique transcriptional changes in human prodromal Huntington's disease brain.

Published in:

BMC Medical Genomics, 2019, v. 12, n. 1, p. N.PAG, doi. 10.1186/s12920-019-0581-9

By:

Agus, Filisia;
Crespo, Diego;
Myers, Richard H.;
Labadorf, Adam

Publication type:

Article

Expression of Piwi protein MIWI2 defines a distinct population of multiciliated cells.

Published in:

2017

By:

Wasserman, Gregory A.;
Szymaniak, Aleksander D.;
Hinds, Anne C.;
Yamamoto, Kazuko;
Kamata, Hirofumi;
Smith, Nicole M. S.;
Hilliard, Kristie L.;
Carrieri, Claudia;
Labadorf, Adam T.;
Quinton, Lee J.;
Ai, Xingbin;
Varelas, Xaralabos;
Chen, Felicia;
Mizgerd, Joseph P.;
Fine, Alan;
O'Carroll, Dónal;
Jones, Matthew R.;
Smith, Nicole Ms

Publication type:

journal article

The 4p16.3 Parkinson Disease Risk Locus Is Associated with GAK Expression and Genes Involved with the Synaptic Vesicle Membrane.

Published in:

PLoS ONE, 2016, v. 11, n. 8, p. 1, doi. 10.1371/journal.pone.0160925

By:

Nagle, Michael W.;
Latourelle, Jeanne C.;
Labadorf, Adam;
Dumitriu, Alexandra;
Hadzi, Tiffany C.;
Beach, Thomas G.;
Myers, Richard H.

Publication type:

Article

Correction: RNA Sequence Analysis of Human Huntington Disease Brain Reveals an Extensive Increase in Inflammatory and Developmental Gene Expression.

Published in:

2016

By:

Labadorf, Adam;
Hoss, Andrew G.;
Lagomarsino, Valentina;
Latourelle, Jeanne C.;
Hadzi, Tiffany C.;
Bregu, Joli;
MacDonald, Marcy E.;
Gusella, James F.;
Chen, Jiang-Fan;
Akbarian, Schahram;
Weng, Zhiping;
Myers, Richard H.

Publication type:

Correction Notice

Inflammation and neuronal gene expression changes differ in early versus late chronic traumatic encephalopathy brain.

Published in:

BMC Medical Genomics, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s12920-023-01471-5

By:

Labadorf, Adam;
Agus, Filisia;
Aytan, Nurgul;
Cherry, Jonathan;
Mez, Jesse;
McKee, Ann;
Stein, Thor D.

Publication type:

Article

Widespread perturbation of ETS factor binding sites in cancer.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-36535-8

By:

Carrasco Pro, Sebastian;
Hook, Heather;
Bray, David;
Berenzy, Daniel;
Moyer, Devlin;
Yin, Meimei;
Labadorf, Adam Thomas;
Tewhey, Ryan;
Siggers, Trevor;
Fuxman Bass, Juan Ignacio

Publication type:

Article

Evaluation of logistic regression models and effect of covariates for case-control study in RNA-Seq analysis.

Published in:

BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1498-y

By:

Seung Hoan Choi;
Labadorf, Adam T.;
Myers, Richard H.;
Lunetta, Kathryn L.;
Dupuis, Josée;
DeStefano, Anita L.

Publication type:

Article

A multi-omic approach implicates novel protein dysregulation in post-traumatic stress disorder.

Published in:

Genome Medicine, 2025, v. 17, n. 1, p. 1, doi. 10.1186/s13073-025-01473-1

By:

Wang, Jiawei;
Liu, Yujing;
Li, Hongyu;
Nguyen, Tuan P.;
Soto-Vargas, John Lee;
Wilson, Rashaun;
Wang, Weiwei;
Lam, TuKiet T.;
Zhang, Chi;
Lin, Chen;
Alvarez, Victor E.;
Benedek, David;
Che, Alicia;
Cruz, Dianne A.;
Davis, David A.;
Hoffman, Ellen;
Huber, Bertrand R.;
Kaye, Alfred;
Labadorf, Adam T.;
Keane, Terence M.

Publication type:

Article

Evidence for a Pan-Neurodegenerative Disease Response in Huntington's and Parkinson's Disease Expression Profiles.

Published in:

Frontiers in Molecular Neuroscience, 2018, p. 1, doi. 10.3389/fnmol.2017.00430

By:

Labadorf, Adam;
Choi, Seung H.;
Myers, Richard H.

Publication type:

Article

Linking Proteomic and Transcriptional Data through the Interactome and Epigenome Reveals a Map of Oncogene-induced Signaling.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002887

By:

Huang, Shao-shan Carol;
Clarke, David C.;
Gosline, Sara J. C.;
Labadorf, Adam;
Chouinard, Candace R.;
Gordon, William;
Lauffenburger, Douglas A.;
Fraenkel, Ernest

Publication type:

Article

SDE2 is an essential gene required for ribosome biogenesis and the regulation of alternative splicing.

Published in:

Nucleic Acids Research, 2021, v. 49, n. 16, p. 9424, doi. 10.1093/nar/gkab647

By:

Floro, Jess;
Dai, Anqi;
Metzger, Abigail;
Mora-Martin, Alexandra;
Ganem, Neil J;
Cifuentes, Daniel;
Wu, Ching-Shyi;
Dalal, Jasbir;
Lyons, Shawn M;
Labadorf, Adam;
Flynn, Rachel L

Publication type:

Article

microRNA Profiles in Parkinson's Disease Prefrontal Cortex.

Published in:

Frontiers in Aging Neuroscience, 2016, p. 1, doi. 10.3389/fnagi.2016.00036

By:

Hoss, Andrew G.;
Labadorf, Adam;
Beach, Thomas G.;
Latourelle, Jeanne C.;
Myers, Richard H.

Publication type:

Article

The National PTSD Brain Bank: Progress, Promise, and Vision.

Published in:

Psychiatry: Interpersonal & Biological Processes, 2022, v. 85, n. 2, p. 196, doi. 10.1080/00332747.2022.2068936

By:

Labadorf, Adam

Publication type:

Article

Publisher Correction: Prediction of genome-wide effects of single nucleotide variants on transcription factor binding.

Published in:

2021

By:

Carrasco Pro, Sebastian;
Bulekova, Katia;
Gregor, Brian;
Labadorf, Adam;
Fuxman Bass, Juan Ignacio

Publication type:

Correction Notice

Prediction of genome-wide effects of single nucleotide variants on transcription factor binding.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-74793-4

By:

Carrasco Pro, Sebastian;
Bulekova, Katia;
Gregor, Brian;
Labadorf, Adam;
Fuxman Bass, Juan Ignacio

Publication type:

Article

A glycomics and proteomics study of aging and Parkinson's disease in human brain.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-69480-3

By:

Raghunathan, Rekha;
Hogan, John D.;
Labadorf, Adam;
Myers, Richard H.;
Zaia, Joseph

Publication type:

Article

The Role of H3K4me3 in Transcriptional Regulation Is Altered in Huntington’s Disease.

Published in:

PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0144398

By:

Dong, Xianjun;
Tsuji, Junko;
Labadorf, Adam;
Roussos, Panos;
Chen, Jiang-Fan;
Myers, Richard H.;
Akbarian, Schahram;
Weng, Zhiping

Publication type:

Article

RNA Sequence Analysis of Human Huntington Disease Brain Reveals an Extensive Increase in Inflammatory and Developmental Gene Expression.

Published in:

PLoS ONE, 2015, v. 10, n. 12, p. 1, doi. 10.1371/journal.pone.0143563

By:

Labadorf, Adam;
Hoss, Andrew G.;
Lagomarsino, Valentina;
Latourelle, Jeanne C.;
Hadzi, Tiffany C.;
Bregu, Joli;
MacDonald, Marcy E.;
Gusella, James F.;
Chen, Jiang-Fan;
Akbarian, Schahram;
Weng, Zhiping;
Myers, Richard H.

Publication type:

Article

Evidence of Extensive Alternative Splicing in Post Mortem Human Brain HTT Transcription by mRNA Sequencing.

Published in:

PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0141298

By:

Labadorf, Adam T.;
Myers, Richard H.

Publication type:

Article

Comparative Analysis of Serine/Arginine-Rich Proteins across 27 Eukaryotes: Insights into Sub-Family Classification and Extent of Alternative Splicing.

Published in:

PLoS ONE, 2011, v. 6, n. 9, p. 1, doi. 10.1371/journal.pone.0024542

By:

Richardson, Dale N.;
Rogers, Mark F.;
Labadorf, Adam;
Ben-Hur, Asa;
Guo, Hui;
Paterson, Andrew H.;
Reddy, Anireddy S. N.

Publication type:

Article

MicroRNA Alterations in Chronic Traumatic Encephalopathy and Amyotrophic Lateral Sclerosis.

Published in:

Frontiers in Neuroscience, 2022, p. 1, doi. 10.3389/fnins.2022.855096

By:

Alvia, Marcela;
Aytan, Nurgul;
Spencer, Keith R.;
Foster, Zachariah W.;
Rauf, Nazifa Abdul;
Guilderson, Latease;
Robey, Ian;
Averill, James G.;
Walker, Sean E.;
Alvarez, Victor E.;
Huber, Bertrand R.;
Mathais, Rebecca;
Cormier, Kerry A.;
Nicks, Raymond;
Pothast, Morgan;
Labadorf, Adam;
Agus, Filisia;
Alosco, Michael L.;
Mez, Jesse;
Kowall, Neil W.

Publication type:

Article

APOER2 splicing repertoire in Alzheimer's disease: Insights from long-read RNA sequencing.

Published in:

PLoS Genetics, 2024, v. 20, n. 7, p. 1, doi. 10.1371/journal.pgen.1011348

By:

Gallo, Christina M.;
Kistler, Sabrina A.;
Natrakul, Anna;
Labadorf, Adam T.;
Beffert, Uwe;
Ho, Angela

Publication type:

Article

Large-Scale Discovery of ERK2 Substrates Identifies ERK-Mediated Transcriptional Regulation by ETV3.

Published in:

Science Signaling, 2011, v. 4, n. 196, p. 1, doi. 10.1126/scisignal.2002010

By:

Carlson, Scott M.;
Chouinard, Candace R.;
Labadorf, Adam;
Lam, Carol J.;
Schmelzle, Katrin;
Fraenkel, Ernest;
White, Forest M.

Publication type:

Article

Novel microRNA discovery using small RNA sequencing in post-mortem human brain.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-3114-3

By:

Wake, Christian;
Labadorf, Adam;
Dumitriu, Alexandra;
Hoss, Andrew G.;
Bregu, Joli;
Albrecht, Kenneth H.;
DeStefano, Anita L.;
Myers, Richard H.

Publication type:

Article

Integrative analyses of proteomics and RNA transcriptomics implicate mitochondrial processes, protein folding pathways and GWAS loci in Parkinson disease.

Published in:

BMC Medical Genomics, 2016, p. 1, doi. 10.1186/s12920-016-0164-y

By:

Dumitriu, Alexandra;
Golji, Javad;
Labadorf, Adam T.;
Gao, Benbo;
Beach, Thomas G.;
Myers, Richard H.;
Longo, Kenneth A.;
Latourelle, Jeanne C.

Publication type:

Article

miR-10b-5p expression in Huntington's disease brain relates to age of onset and the extent of striatal involvement.

Published in:

BMC Medical Genomics, 2015, v. 8, n. 1, p. 1, doi. 10.1186/s12920-015-0083-3

By:

Hoss, Andrew G.;
Labadorf, Adam;
Latourelle, Jeanne C.;
Kartha, Vinay K.;
Hadzi, Tiffany C.;
Gusella, James F.;
MacDonald, Marcy E.;
Jiang-Fan Chen;
Akbarian, Schahram;
Zhiping Weng;
Vonsattel, Jean Paul;
Myers, Richard H.

Publication type:

Article

Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii.

Published in:

BMC Genomics, 2010, v. 11, p. 1, doi. 10.1186/1471-2164-11-114

By:

Labadorf, Adam;
Link, Alicia;
Rogers, Mark F.;
Thomas, Julie;
Reddy, Anireddy S.N.;
Ben-Hur, Asa

Publication type:

Article