Works matching AU Labadie, Karine


Results: 67
    1
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    Chromosome reciprocal translocations have accompanied subspecies evolution in bananas.

    Published in:
    Plant Journal, 2020, v. 104, n. 6, p. 1698, doi. 10.1111/tpj.15031
    By:
    • Martin, Guillaume;
    • Baurens, Franc‐Christophe;
    • Hervouet, Catherine;
    • Salmon, Frédéric;
    • Delos, Jean‐Marie;
    • Labadie, Karine;
    • Perdereau, Aude;
    • Mournet, Pierre;
    • Blois, Louis;
    • Dupouy, Marion;
    • Carreel, Françoise;
    • Ricci, Sébastien;
    • Lemainque, Arnaud;
    • Yahiaoui, Nabila;
    • D'Hont, Angélique
    Publication type:
    Article
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    Unravelling genomic drivers of speciation in Musa through genome assemblies of wild banana ancestors.

    Published in:
    Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56329-4
    By:
    • Martin, Guillaume;
    • Istace, Benjamin;
    • Baurens, Franc-Christophe;
    • Belser, Caroline;
    • Hervouet, Catherine;
    • Labadie, Karine;
    • Cruaud, Corinne;
    • Noel, Benjamin;
    • Guiougou, Chantal;
    • Salmon, Frederic;
    • Mahadeo, Joël;
    • Ahmad, Fajarudin;
    • Volkaert, Hugo A.;
    • Droc, Gaëtan;
    • Rouard, Mathieu;
    • Sardos, Julie;
    • Wincker, Patrick;
    • Yahiaoui, Nabila;
    • Aury, Jean-Marc;
    • D'Hont, Angélique
    Publication type:
    Article
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    Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing.

    Published in:
    Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02559-3
    By:
    • Belser, Caroline;
    • Baurens, Franc-Christophe;
    • Noel, Benjamin;
    • Martin, Guillaume;
    • Cruaud, Corinne;
    • Istace, Benjamin;
    • Yahiaoui, Nabila;
    • Labadie, Karine;
    • Hřibová, Eva;
    • Doležel, Jaroslav;
    • Lemainque, Arnaud;
    • Wincker, Patrick;
    • D'Hont, Angélique;
    • Aury, Jean-Marc
    Publication type:
    Article
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    Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria.

    Published in:
    Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.567431
    By:
    • Doré, Hugo;
    • Farrant, Gregory K.;
    • Guyet, Ulysse;
    • Haguait, Julie;
    • Humily, Florian;
    • Ratin, Morgane;
    • Pitt, Frances D.;
    • Ostrowski, Martin;
    • Six, Christophe;
    • Brillet-Guéguen, Loraine;
    • Hoebeke, Mark;
    • Bisch, Antoine;
    • Le Corguillé, Gildas;
    • Corre, Erwan;
    • Labadie, Karine;
    • Aury, Jean-Marc;
    • Wincker, Patrick;
    • Choi, Dong Han;
    • Noh, Jae Hoon;
    • Eveillard, Damien
    Publication type:
    Article
    11

    The Paramecium Germline Genome Provides a Niche for Intragenic Parasitic DNA: Evolutionary Dynamics of Internal Eliminated Sequences.

    Published in:
    PLoS Genetics, 2012, v. 8, n. 10, p. 1, doi. 10.1371/journal.pgen.1002984
    By:
    • Arnaiz, Olivier;
    • Mathy, Nathalie;
    • Baudry, Céline;
    • Malinsky, Sophie;
    • Aury, Jean-Marc;
    • Wilkes, Cyril Denby;
    • Garnier, Olivier;
    • Labadie, Karine;
    • Lauderdale, Benjamin E.;
    • Le Mouël, Anne;
    • Marmignon, Antoine;
    • Nowacki, Mariusz;
    • Poulain, Julie;
    • Prajer, Malgorzata;
    • Wincker, Patrick;
    • Meyer, Eric;
    • Duharcourt, Sandra;
    • Duret, Laurent;
    • Bétermier, Mireille;
    • Sperling, Linda
    Publication type:
    Article
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    Genetic Architecture of a Rice Nested Association Mapping Population.

    Published in:
    G3: Genes | Genomes | Genetics, 2017, v. 7, n. 6, p. 1913, doi. 10.1534/g3.117.041608
    By:
    • Fragoso, Christopher A.;
    • Moreno, Maria;
    • Zuoheng Wang;
    • Heffelfinger, Christopher;
    • Arbelaez, Lady J.;
    • Aguirre, John A.;
    • Franco, Natalia;
    • Romero, Luz E.;
    • Labadie, Karine;
    • Zhao, Hongyu;
    • Dellaporta, Stephen L.;
    • Lorieux, Mathias
    Publication type:
    Article
    17

    The Transcriptomes of Xiphinema index and Longidorus elongatus Suggest Independent Acquisition of Some Plant Parasitism Genes by Horizontal Gene Transfer in Early-Branching Nematodes.

    Published in:
    Genes, 2017, v. 8, n. 10, p. 287, doi. 10.3390/genes8100287
    By:
    • Danchin, Etienne G. J.;
    • Perfus-Barbeoch, Laetitia;
    • Rancurel, Corinne;
    • Thorpe, Peter;
    • Da Rocha, Martine;
    • Bajew, Simon;
    • Neilson, Roy;
    • Sokolova (Guzeeva), Elena;
    • Da Silva, Corinne;
    • Guy, Julie;
    • Labadie, Karine;
    • Esmenjaud, Daniel;
    • Helder, Johannes;
    • Jones, John T.;
    • Eves-van den Akker, Sebastian
    Publication type:
    Article
    18

    Diversity and Evolution of Pigment Types in Marine Synechococcus Cyanobacteria.

    Published in:
    Genome Biology & Evolution, 2022, v. 14, n. 4, p. 1, doi. 10.1093/gbe/evac035
    By:
    • Grébert, Théophile;
    • Garczarek, Laurence;
    • Daubin, Vincent;
    • Humily, Florian;
    • Marie, Dominique;
    • Ratin, Morgane;
    • Devailly, Alban;
    • Farrant, Gregory K;
    • Mary, Isabelle;
    • Mella-Flores, Daniella;
    • Tanguy, Gwenn;
    • Labadie, Karine;
    • Wincker, Patrick;
    • Kehoe, David M;
    • Partensky, Frédéric
    Publication type:
    Article
    19

    Transcriptome of the synganglion in the tick Ixodes ricinus and evolution of the cys-loop ligand-gated ion channel family in ticks.

    Published in:
    BMC Genomics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12864-022-08669-4
    By:
    • Rispe, Claude;
    • Hervet, Caroline;
    • de la Cotte, Nathalie;
    • Daveu, Romain;
    • Labadie, Karine;
    • Noel, Benjamin;
    • Aury, Jean-Marc;
    • Thany, Steeve;
    • Taillebois, Emiliane;
    • Cartereau, Alison;
    • Le Mauff, Anaïs;
    • Charvet, Claude L.;
    • Auger, Clément;
    • Courtot, Elise;
    • Neveu, Cédric;
    • Plantard, Olivier
    Publication type:
    Article
    20

    Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence.

    Published in:
    Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03939-z
    By:
    • Guérin, Nina;
    • Ciccarella, Marta;
    • Flamant, Elisa;
    • Frémont, Paul;
    • Mangenot, Sophie;
    • Istace, Benjamin;
    • Noel, Benjamin;
    • Belser, Caroline;
    • Bertrand, Laurie;
    • Labadie, Karine;
    • Cruaud, Corinne;
    • Romac, Sarah;
    • Bachy, Charles;
    • Gachenot, Martin;
    • Pelletier, Eric;
    • Alberti, Adriana;
    • Jaillon, Olivier;
    • Wincker, Patrick;
    • Aury, Jean-Marc;
    • Carradec, Quentin
    Publication type:
    Article
    21

    Alternating between even and odd ploidy levels switches on and off the recombination control, even near the centromeres.

    Published in:
    Plant Cell, 2024, v. 36, n. 10, p. 4472, doi. 10.1093/plcell/koae208
    By:
    • Boideau, Franz;
    • Huteau, Virginie;
    • Maillet, Loeiz;
    • Brunet, Anael;
    • Coriton, Olivier;
    • Deniot, Gwenaëlle;
    • Trotoux, Gwenn;
    • Taburel-Lodé, Maryse;
    • Eber, Frédérique;
    • Gilet, Marie;
    • Baron, Cécile;
    • Boutte, Julien;
    • Richard, Gautier;
    • Aury, Jean-Marc;
    • Belser, Caroline;
    • Labadie, Karine;
    • Morice, Jérôme;
    • Falentin, Cyril;
    • Martin, Olivier;
    • Falque, Matthieu
    Publication type:
    Article
    22

    A Chromosome-Level Genome Assembly of the European Beech (Fagus sylvatica) Reveals Anomalies for Organelle DNA Integration, Repeat Content and Distribution of SNPs.

    Published in:
    Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2021.691058
    By:
    • Mishra, Bagdevi;
    • Ulaszewski, Bartosz;
    • Meger, Joanna;
    • Aury, Jean-Marc;
    • Bodénès, Catherine;
    • Lesur-Kupin, Isabelle;
    • Pfenninger, Markus;
    • Da Silva, Corinne;
    • Gupta, Deepak K;
    • Guichoux, Erwan;
    • Heer, Katrin;
    • Lalanne, Céline;
    • Labadie, Karine;
    • Opgenoorth, Lars;
    • Ploch, Sebastian;
    • Le Provost, Grégoire;
    • Salse, Jérôme;
    • Scotti, Ivan;
    • Wötzel, Stefan;
    • Plomion, Christophe
    Publication type:
    Article
    23

    Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean.

    Published in:
    Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38610-6
    By:
    • Armstrong, Eric J.;
    • Lê-Hoang, Julie;
    • Carradec, Quentin;
    • Aury, Jean-Marc;
    • Noel, Benjamin;
    • Hume, Benjamin C. C.;
    • Voolstra, Christian R.;
    • Poulain, Julie;
    • Belser, Caroline;
    • Paz-García, David A.;
    • Cruaud, Corinne;
    • Labadie, Karine;
    • Da Silva, Corinne;
    • Moulin, Clémentine;
    • Boissin, Emilie;
    • Bourdin, Guillaume;
    • Iwankow, Guillaume;
    • Romac, Sarah;
    • Agostini, Sylvain;
    • Banaigs, Bernard
    Publication type:
    Article
    24

    Diversity of the Pacific Ocean coral reef microbiome.

    Published in:
    Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-38500-x
    By:
    • Galand, Pierre E.;
    • Ruscheweyh, Hans-Joachim;
    • Salazar, Guillem;
    • Hochart, Corentin;
    • Henry, Nicolas;
    • Hume, Benjamin C. C.;
    • Oliveira, Pedro H.;
    • Perdereau, Aude;
    • Labadie, Karine;
    • Belser, Caroline;
    • Boissin, Emilie;
    • Romac, Sarah;
    • Poulain, Julie;
    • Bourdin, Guillaume;
    • Iwankow, Guillaume;
    • Moulin, Clémentine;
    • Armstrong, Eric J.;
    • Paz-García, David A.;
    • Ziegler, Maren;
    • Agostini, Sylvain
    Publication type:
    Article
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    Author Correction to: Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.

    Published in:
    2021
    By:
    • Farhat, Sarah;
    • Le, Phuong;
    • Kayal, Ehsan;
    • Noel, Benjamin;
    • Bigeard, Estelle;
    • Corre, Erwan;
    • Maumus, Florian;
    • Florent, Isabelle;
    • Alberti, Adriana;
    • Aury, Jean-Marc;
    • Barbeyron, Tristan;
    • Cai, Ruibo;
    • Da Silva, Corinne;
    • Istace, Benjamin;
    • Labadie, Karine;
    • Marie, Dominique;
    • Mercier, Jonathan;
    • Rukwavu, Tsinda;
    • Szymczak, Jeremy;
    • Tonon, Thierry
    Publication type:
    Correction Notice
    28

    Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.

    Published in:
    BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-020-00927-9
    By:
    • Farhat, Sarah;
    • Le, Phuong;
    • Kayal, Ehsan;
    • Noel, Benjamin;
    • Bigeard, Estelle;
    • Corre, Erwan;
    • Maumus, Florian;
    • Florent, Isabelle;
    • Alberti, Adriana;
    • Aury, Jean-Marc;
    • Barbeyron, Tristan;
    • Cai, Ruibo;
    • Da Silva, Corinne;
    • Istace, Benjamin;
    • Labadie, Karine;
    • Marie, Dominique;
    • Mercier, Jonathan;
    • Rukwavu, Tsinda;
    • Szymczak, Jeremy;
    • Tonon, Thierry
    Publication type:
    Article
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    Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp.

    Published in:
    BMC Biology, 2021, v. 19, n. 1, p. 1, doi. 10.1186/s12915-020-00927-9
    By:
    • Farhat, Sarah;
    • Le, Phuong;
    • Kayal, Ehsan;
    • Noel, Benjamin;
    • Bigeard, Estelle;
    • Corre, Erwan;
    • Maumus, Florian;
    • Florent, Isabelle;
    • Alberti, Adriana;
    • Aury, Jean-Marc;
    • Barbeyron, Tristan;
    • Cai, Ruibo;
    • Da Silva, Corinne;
    • Istace, Benjamin;
    • Labadie, Karine;
    • Marie, Dominique;
    • Mercier, Jonathan;
    • Rukwavu, Tsinda;
    • Szymczak, Jeremy;
    • Tonon, Thierry
    Publication type:
    Article
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    The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates.

    Published in:
    Nature Communications, 2014, v. 5, n. 4, p. 3657, doi. 10.1038/ncomms4657
    By:
    • Berthelot, Camille;
    • Brunet, Frédéric;
    • Chalopin, Domitille;
    • Juanchich, Amélie;
    • Bernard, Maria;
    • Noël, Benjamin;
    • Bento, Pascal;
    • Da Silva, Corinne;
    • Labadie, Karine;
    • Alberti, Adriana;
    • Aury, Jean-Marc;
    • Louis, Alexandra;
    • Dehais, Patrice;
    • Bardou, Philippe;
    • Montfort, Jérôme;
    • Klopp, Christophe;
    • Cabau, Cédric;
    • Gaspin, Christine;
    • Thorgaard, Gary H.;
    • Boussaha, Mekki
    Publication type:
    Article
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    Predicting global distributions of eukaryotic plankton communities from satellite data.

    Published in:
    ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00308-7
    By:
    • Kaneko, Hiroto;
    • Endo, Hisashi;
    • Henry, Nicolas;
    • Berney, Cédric;
    • Mahé, Frédéric;
    • Poulain, Julie;
    • Labadie, Karine;
    • Beluche, Odette;
    • El Hourany, Roy;
    • Tara Oceans Coordinators;
    • Acinas, Silvia G.;
    • Babin, Marcel;
    • Bork, Peer;
    • Bowler, Chris;
    • Cochrane, Guy;
    • de Vargas, Colomban;
    • Gorsky, Gabriel;
    • Guidi, Lionel;
    • Grimsley, Nigel;
    • Hingamp, Pascal
    Publication type:
    Article
    44

    Ocean-wide comparisons of mesopelagic planktonic community structures.

    Published in:
    ISME Communications, 2023, v. 3, n. 1, p. 1, doi. 10.1038/s43705-023-00279-9
    By:
    • Rigonato, Janaina;
    • Budinich, Marko;
    • Murillo, Alejandro A.;
    • Brandão, Manoela C.;
    • Pierella Karlusich, Juan J.;
    • Soviadan, Yawouvi Dodji;
    • Gregory, Ann C.;
    • Endo, Hisashi;
    • Kokoszka, Florian;
    • Vik, Dean;
    • Henry, Nicolas;
    • Frémont, Paul;
    • Labadie, Karine;
    • Zayed, Ahmed A.;
    • Dimier, Céline;
    • Picheral, Marc;
    • Searson, Sarah;
    • Poulain, Julie;
    • Kandels, Stefanie;
    • Pesant, Stéphane
    Publication type:
    Article
    45

    Genome‐wide evolutionary response of European oaks during the Anthropocene.

    Published in:
    Evolution Letters, 2022, v. 6, n. 1, p. 4, doi. 10.1002/evl3.269
    By:
    • Saleh, Dounia;
    • Chen, Jun;
    • Leplé, Jean‐Charles;
    • Leroy, Thibault;
    • Truffaut, Laura;
    • Dencausse, Benjamin;
    • Lalanne, Céline;
    • Labadie, Karine;
    • Lesur, Isabelle;
    • Bert, Didier;
    • Lagane, Frédéric;
    • Morneau, François;
    • Aury, Jean‐Marc;
    • Plomion, Christophe;
    • Lascoux, Martin;
    • Kremer, Antoine
    Publication type:
    Article
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    Diversity and evolution of the emerging Pandoraviridae family.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04698-4
    By:
    • Legendre, Matthieu;
    • Fabre, Elisabeth;
    • Poirot, Olivier;
    • Jeudy, Sandra;
    • Lartigue, Audrey;
    • Alempic, Jean-Marie;
    • Beucher, Laure;
    • Philippe, Nadège;
    • Bertaux, Lionel;
    • Christo-Foroux, Eugène;
    • Labadie, Karine;
    • Couté, Yohann;
    • Abergel, Chantal;
    • Claverie, Jean-Michel
    Publication type:
    Article
    49

    A global ocean atlas of eukaryotic genes.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02342-1
    By:
    • Carradec, Quentin;
    • Pelletier, Eric;
    • Da Silva, Corinne;
    • Alberti, Adriana;
    • Seeleuthner, Yoann;
    • Blanc-Mathieu, Romain;
    • Lima-Mendez, Gipsi;
    • Rocha, Fabio;
    • Tirichine, Leila;
    • Labadie, Karine;
    • Kirilovsky, Amos;
    • Bertrand, Alexis;
    • Engelen, Stefan;
    • Madoui, Mohammed-Amin;
    • Méheust, Raphaël;
    • Poulain, Julie;
    • Romac, Sarah;
    • Richter, Daniel J.;
    • Yoshikawa, Genki;
    • Dimier, Céline
    Publication type:
    Article
    50

    Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02235-3
    By:
    • Seeleuthner, Yoann;
    • Mondy, Samuel;
    • Lombard, Vincent;
    • Carradec, Quentin;
    • Pelletier, Eric;
    • Wessner, Marc;
    • Leconte, Jade;
    • Mangot, Jean-François;
    • Poulain, Julie;
    • Labadie, Karine;
    • Logares, Ramiro;
    • Shinichi Sunagawa;
    • de Berardinis, Véronique;
    • Salanoubat, Marcel;
    • Dimier, Céline;
    • Kandels-Lewis, Stefanie;
    • Picheral, Marc;
    • Searson, Sarah;
    • Pesant, Stephane;
    • Poulton, Nicole
    Publication type:
    Article