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BALLView: An object-oriented molecular visualization and modeling framework.
- Published in:
- Journal of Computer-Aided Molecular Design, 2005, v. 19, n. 11, p. 791, doi. 10.1007/s10822-005-9027-x
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- Publication type:
- Article
Changes of Protein Expression after CRISPR/Cas9 Knockout of miRNA-142 in Cell Lines Derived from Diffuse Large B-Cell Lymphoma.
- Published in:
- Cancers, 2022, v. 14, n. 20, p. 5031, doi. 10.3390/cancers14205031
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- Publication type:
- Article
Systematic permutation testing in GWAS pathway analyses: identification of genetic networks in dilated cardiomyopathy and ulcerative colitis
- Published in:
- BMC Genomics, 2014, v. 15, n. 1, p. 622, doi. 10.1186/1471-2164-15-622
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- Publication type:
- Article
Treatment-independent miRNA signature in blood of wilms tumor patients.
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- BMC Genomics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2164-13-379
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- Publication type:
- Article
Immunogenicity of autoantigens.
- Published in:
- BMC Genomics, 2011, v. 12, n. 1, p. 340, doi. 10.1186/1471-2164-12-340
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- Publication type:
- Article
High-throughput miRNA profiling of humanmelanoma blood samples.
- Published in:
- BMC Cancer, 2010, v. 10, p. 262, doi. 10.1186/1471-2407-10-262
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- Publication type:
- Article
miRNAs in lung cancer - studying complex fingerprints in patient's blood cells by microarray experiments.
- Published in:
- 2009
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- Publication type:
- journal article
Staphylococcus aureus ClpC ATPase is a late growth phase effector of metabolism and persistence.
- Published in:
- Proteomics, 2009, v. 9, n. 5, p. 1152, doi. 10.1002/pmic.200800586
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- Publication type:
- Article
miRTargetLink 2.0—interactive miRNA target gene and target pathway networks.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. W1, p. W409, doi. 10.1093/nar/gkab297
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- Publication type:
- Article
Validation of human microRNA target pathways enables evaluation of target prediction tools.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. 1, p. 127, doi. 10.1093/nar/gkaa1161
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- Publication type:
- Article
Quantitative and time-resolved miRNA pattern of early human T cell activation.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. 18, p. 10164, doi. 10.1093/nar/gkaa788
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- Publication type:
- Article
GeneTrail 3: advanced high-throughput enrichment analysis.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. W1, p. W515, doi. 10.1093/nar/gkaa306
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- Publication type:
- Article
miRPathDB 2.0: a novel release of the miRNA Pathway Dictionary Database.
- Published in:
- Nucleic Acids Research, 2020, v. 48, n. D1, p. D142, doi. 10.1093/nar/gkz1022
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- Publication type:
- Article
sncRNA Zoo: a repository for circulating small noncoding RNAs in animals.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. 9, p. 4431, doi. 10.1093/nar/gkz227
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- Publication type:
- Article
An estimate of the total number of true human miRNAs.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. 7, p. 3353, doi. 10.1093/nar/gkz097
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- Publication type:
- Article
miRCarta: a central repository for collecting miRNA candidates.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. D1, p. D160, doi. 10.1093/nar/gkx851
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- Publication type:
- Article
RegulatorTrail: a web service for the identification of key transcriptional regulators.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. W1, p. W146, doi. 10.1093/nar/gkx350
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- Publication type:
- Article
miRPathDB: a new dictionary on microRNAs and target pathways.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. D1, p. D90, doi. 10.1093/nar/gkw926
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- Publication type:
- Article
Integrative analysis of cancer-related data using CAP.
- Published in:
- FASEB Journal, 2004, v. 18, n. 12, p. 1465, doi. 10.1096/fj.04-1797fje
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- Publication type:
- Article
Cover Picture: Evidence for the Mode of Action of the Highly Cytotoxic Streptomyces Polyketide Kendomycin (ChemBioChem 11/2007).
- Published in:
- ChemBioChem, 2007, v. 8, n. 11, p. 1209, doi. 10.1002/cbic.200790033
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- Publication type:
- Article
Evidence for the Mode of Action of the Highly Cytotoxic Streptomyces Polyketide Kendomycin.
- Published in:
- ChemBioChem, 2007, v. 8, n. 11, p. 1261, doi. 10.1002/cbic.200700050
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- Publication type:
- Article
Low miR-150-5p and miR-320b Expression Predicts Reduced Survival of COPD Patients.
- Published in:
- Cells (2073-4409), 2019, v. 8, n. 10, p. 1162, doi. 10.3390/cells8101162
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- Publication type:
- Article
miR-34a: a new player in the regulation of T cell function by modulation of NF-κB signaling.
- Published in:
- Cell Death & Disease, 2019, v. 10, n. 2, p. 1, doi. 10.1038/s41419-018-1295-1
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- Publication type:
- Article
Modulation of intracellular calcium signaling by microRNA-34a-5p.
- Published in:
- Cell Death & Disease, 2018, v. 9, n. 10, p. 1, doi. 10.1038/s41419-018-1050-7
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- Publication type:
- Article
Langevin dynamics simulations of macromolecules on parallel computers.
- Published in:
- Macromolecular Theory & Simulations, 1997, v. 6, n. 2, p. 507, doi. 10.1002/mats.1997.040060213
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- Publication type:
- Article
MERIDA: a novel Boolean logic-based integer linear program for personalized cancer therapy.
- Published in:
- Bioinformatics, 2021, v. 37, n. 21, p. 3881, doi. 10.1093/bioinformatics/btab546
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- Publication type:
- Article
ClinOmicsTrail<sup>bc</sup>: a visual analytics tool for breast cancer treatment stratification.
- Published in:
- Bioinformatics, 2019, v. 35, n. 24, p. 5171, doi. 10.1093/bioinformatics/btz302
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- Publication type:
- Article
Multi-omics enrichment analysis using the GeneTrail2 web service.
- Published in:
- Bioinformatics, 2016, v. 32, n. 10, p. 1502, doi. 10.1093/bioinformatics/btv770
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- Publication type:
- Article
ballaxy: web services for structural bioinformatics.
- Published in:
- Bioinformatics, 2015, v. 31, n. 1, p. 121, doi. 10.1093/bioinformatics/btu574
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- Publication type:
- Article
NetworkTrail—a web service for identifying and visualizing deregulated subnetworks.
- Published in:
- Bioinformatics, 2013, v. 29, n. 13, p. 1702, doi. 10.1093/bioinformatics/btt204
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- Publication type:
- Article
Automated bond order assignment as an optimization problem.
- Published in:
- Bioinformatics, 2011, v. 27, n. 5, p. 619, doi. 10.1093/bioinformatics/btq718
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- Publication type:
- Article
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis.
- Published in:
- Bioinformatics, 2009, v. 25, n. 21, p. 2787, doi. 10.1093/bioinformatics/btp510
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- Publication type:
- Article
Multiple sequence alignment with arbitrary gap costs: Computing an optimal solution using polyhedral combinatorics.
- Published in:
- Bioinformatics, 2002, v. 18, p. S4, doi. 10.1093/bioinformatics/18.suppl_2.S4
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- Publication type:
- Article
Network-based interactive navigation and analysis of large biological datasets.
- Published in:
- IT: Information Technology, 2015, v. 57, n. 1, p. 37, doi. 10.1515/itit-2014-1076
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- Publication type:
- Article
Simultaneous regression and classification for drug sensitivity prediction using an advanced random forest method.
- Published in:
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-17609-x
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- Publication type:
- Article
SEQUENTIAL AND PARALLEL ALGORITHMS FOR THE k CLOSEST PAIRS PROBLEM.
- Published in:
- International Journal of Computational Geometry & Applications, 1995, v. 5, n. 3, p. 273, doi. 10.1142/S0218195995000167
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- Publication type:
- Article
AN OPTIMAL CONSTRUCTION METHOD FOR GENERALIZED CONVEX LAYERS.
- Published in:
- International Journal of Computational Geometry & Applications, 1993, v. 3, n. 3, p. 245, doi. 10.1142/S0218195993000166
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- Publication type:
- Article
NightShift: NMR shift inference by general hybrid model training - a framework for NMR chemical shift prediction.
- Published in:
- BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-98
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- Publication type:
- Article
BALL - biochemical algorithms library 1.3.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 531, doi. 10.1186/1471-2105-11-531
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- Publication type:
- Article
BNDB -- The Biochemical Network Database.
- Published in:
- BMC Bioinformatics, 2007, v. 8, p. 367, doi. 10.1186/1471-2105-8-367
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- Publication type:
- Article
Combination of Autoantibody Signature with PSA Level Enables a Highly Accurate Blood-Based Differentiation of Prostate Cancer Patients from Patients with Benign Prostatic Hyperplasia.
- Published in:
- PLoS ONE, 2015, v. 10, n. 6, p. 1, doi. 10.1371/journal.pone.0128235
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- Publication type:
- Article
BiNA: A Visual Analytics Tool for Biological Network Data.
- Published in:
- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0087397
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- Publication type:
- Article
Autoantibody Signature Differentiates Wilms Tumor Patients from Neuroblastoma Patients.
- Published in:
- PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0028951
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- Publication type:
- Article
Multiple Sclerosis: MicroRNA Expression Profiles Accurately Differentiate Patients with Relapsing- Remitting Disease from Healthy Controls.
- Published in:
- PLoS ONE, 2009, v. 4, n. 10, p. 1, doi. 10.1371/journal.pone.0007440
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- Publication type:
- Article
Increased Seroreactivity to Glioma-Expressed Antigen 2 in Brain Tumor Patients under Radiation.
- Published in:
- PLoS ONE, 2008, v. 3, n. 5, p. 1, doi. 10.1371/journal.pone.0002164
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- Publication type:
- Article
A branch-and-cut algorithm for multiple sequence alignment.
- Published in:
- Mathematical Programming, 2006, v. 105, n. 2/3, p. 387, doi. 10.1007/s10107-005-0659-3
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- Publication type:
- Article
Efficient computation of root mean square deviations under rigid transformations.
- Published in:
- Journal of Computational Chemistry, 2014, v. 35, n. 10, p. 765, doi. 10.1002/jcc.23513
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- Publication type:
- Article
Circulating serum miRNAs as potential biomarkers for nephroblastoma.
- Published in:
- Pediatric Blood & Cancer, 2015, v. 62, n. 8, p. 1360, doi. 10.1002/pbc.25481
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- Publication type:
- Article
Transcriptome analysis by GeneTrail revealed regulation of functional categories in response to alterations of iron homeostasis in Arabidopsis thaliana.
- Published in:
- BMC Plant Biology, 2011, v. 11, n. 1, p. 87, doi. 10.1186/1471-2229-11-87
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- Publication type:
- Article
Cas9-mediated knockout of Ndrg2 enhances the regenerative potential of dendritic cells for wound healing.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40519-z
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- Publication type:
- Article