Works by Kulkarni, Purva

Results: 23

Application of metabolite set enrichment analysis on untargeted metabolomics data prioritises relevant pathways and detects novel biomarkers for inherited metabolic disorders.

Published in:

Journal of Inherited Metabolic Disease, 2022, v. 45, n. 4, p. 682, doi. 10.1002/jimd.12522

By:

Hoegen, Brechtje;
Hampstead, Juliet E.;
Engelke, Udo F.H.;
Kulkarni, Purva;
Wevers, Ron A.;
Brunner, Han G.;
Coene, Karlien L. M.;
Gilissen, Christian

Publication type:

Article

Confirmation of neurometabolic diagnoses using age‐dependent cerebrospinal fluid metabolomic profiles.

Published in:

Journal of Inherited Metabolic Disease, 2020, v. 43, n. 5, p. 1112, doi. 10.1002/jimd.12253

By:

Peters, Tessa M. A.;
Engelke, Udo F. H.;
Boer, Siebolt;
Heeft, Ed;
Pritsch, Cynthia;
Kulkarni, Purva;
Wevers, Ron A.;
Willemsen, Michèl A. A. P.;
Verbeek, Marcel M.;
Coene, Karlien L. M.

Publication type:

Article

A non-invasive soil-based setup to study tomato root volatiles released by healthy and infected roots.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-69468-z

By:

Gulati, Sneha;
Ballhausen, Max-Bernhard;
Kulkarni, Purva;
Grosch, Rita;
Garbeva, Paolina

Publication type:

Article

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species.

Published in:

Planta: An International Journal of Plant Biology, 2018, v. 248, n. 6, p. 1515, doi. 10.1007/s00425-018-2989-4

By:

Kulkarni, Purva;
Wilschut, Rutger A.;
Verhoeven, Koen J. F.;
van der Putten, Wim H.;
Garbeva, Paolina

Publication type:

Article

Correcting mass shifts: A lock mass-free recalibration procedure for mass spectrometry imaging data.

Published in:

Analytical & Bioanalytical Chemistry, 2015, v. 407, n. 25, p. 7603, doi. 10.1007/s00216-015-8935-4

By:

Kulkarni, Purva;
Kaftan, Filip;
Kynast, Philipp;
Svatoš, Aleš;
Böcker, Sebastian

Publication type:

Article

Drosophila melanogaster chemical ecology revisited: 2-D distribution maps of sex pheromones on whole virgin and mated flies by mass spectrometry imaging.

Published in:

BMC Zoology, 2020, v. 5, n. 1, p. 1, doi. 10.1186/s40850-020-00053-7

By:

Kaftan, Filip;
Kulkarni, Purva;
Knaden, Markus;
Böcker, Sebastian;
Hansson, Bill S.;
Svatoš, Aleš

Publication type:

Article

Root traits and belowground herbivores relate to plant–soil feedback variation among congeners.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-09615-x

By:

Wilschut, Rutger A.;
van der Putten, Wim H.;
Garbeva, Paolina;
Harkes, Paula;
Konings, Wouter;
Kulkarni, Purva;
Martens, Henk;
Geisen, Stefan

Publication type:

Article

Evaluation and comparison of silorane resin composite to glass ionomer in occluso-proximal restorations of primary molars: A randomized controlled trial.

Published in:

Journal of the Indian Society of Pedodontics & Preventive Dentistry, 2022, v. 40, n. 3, p. 281, doi. 10.4103/jisppd.jisppd_377_22

By:

Maru, Viral;
Kulkarni, Purva;
Chauhan, Rewant;
Bapat, Salil;
Maru, Viral P;
Bapat, Salil S

Publication type:

Article

N-linked glycosylation of the M-protein variable region: glycoproteogenomics reveals a new layer of personalized complexity in multiple myeloma.

Published in:

Clinical Chemistry & Laboratory Medicine, 2024, v. 62, n. 8, p. 1626, doi. 10.1515/cclm-2023-1189

By:

Langerhorst, Pieter;
Baerenfaenger, Melissa;
Kulkarni, Purva;
Nadal, Simon;
Wijnands, Charissa;
Post, Merel A.;
Noori, Somayya;
vanDuijn, Martijn M.;
Joosten, Irma;
Dejoie, Thomas;
van Gool, Alain J.;
Gloerich, Jolein;
Lefeber, Dirk J.;
Wessels, Hans J.C.T.;
Jacobs, Joannes F.M.

Publication type:

Article

FAIR Data Cube, a FAIR data infrastructure for integrated multi-omics data analysis.

Published in:

Journal of Biomedical Semantics, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13326-024-00321-2

By:

Liao, Xiaofeng;
Ederveen, Thomas H.A.;
Niehues, Anna;
de Visser, Casper;
Huang, Junda;
Badmus, Firdaws;
Doornbos, Cenna;
Orlova, Yuliia;
Kulkarni, Purva;
van der Velde, K. Joeri;
Swertz, Morris A.;
Brandt, Martin;
van Gool, Alain J.;
't Hoen, Peter A. C.

Publication type:

Article

FAIR Data Cube, a FAIR data infrastructure for integrated multi-omics data analysis.

Published in:

Journal of Biomedical Semantics, 2024, v. 1, p. 1, doi. 10.1186/s13326-024-00321-2

By:

Liao, Xiaofeng;
Ederveen, Thomas H.A.;
Niehues, Anna;
de Visser, Casper;
Huang, Junda;
Badmus, Firdaws;
Doornbos, Cenna;
Orlova, Yuliia;
Kulkarni, Purva;
van der Velde, K. Joeri;
Swertz, Morris A.;
Brandt, Martin;
van Gool, Alain J.;
't Hoen, Peter A. C.

Publication type:

Article

Benchmarking Outlier Detection Methods for Detecting IEM Patients in Untargeted Metabolomics Data.

Published in:

Metabolites (2218-1989), 2023, v. 13, n. 1, p. 97, doi. 10.3390/metabo13010097

By:

Bongaerts, Michiel;
Kulkarni, Purva;
Zammit, Alan;
Bonte, Ramon;
Kluijtmans, Leo A. J.;
Blom, Henk J.;
Engelke, Udo F. H.;
Tax, David M. J.;
Ruijter, George J. G.;
Reinders, Marcel J. T.

Publication type:

Article

Metabolomics-Based Screening of Inborn Errors of Metabolism: Enhancing Clinical Application with a Robust Computational Pipeline.

Published in:

Metabolites (2218-1989), 2021, v. 11, n. 9, p. 568, doi. 10.3390/metabo11090568

By:

Hoegen, Brechtje;
Zammit, Alan;
Gerritsen, Albert;
Engelke, Udo F. H.;
Castelein, Steven;
van de Vorst, Maartje;
Kluijtmans, Leo A. J.;
Huigen, Marleen C. D. G.;
Wevers, Ron A.;
van Gool, Alain J.;
Gilissen, Christian;
Coene, Karlien L. M.;
Kulkarni, Purva

Publication type:

Article

Variable Selection in Untargeted Metabolomics and the Danger of Sparsity.

Published in:

Metabolites (2218-1989), 2020, v. 10, n. 11, p. 470, doi. 10.3390/metabo10110470

By:

Tinnevelt, Gerjen H.;
Engelke, Udo F.H.;
Wevers, Ron A.;
Veenhuis, Stefanie;
Willemsen, Michel A.;
Coene, Karlien L.M.;
Kulkarni, Purva;
Jansen, Jeroen J.

Publication type:

Article

Untargeted metabolomics and infrared ion spectroscopy identify biomarkers for pyridoxine-dependent epilepsy.

Published in:

2021

By:

Engelke, Udo F. H.;
van Outersterp, Rianne E.;
Merx, Jona;
van Geenen, Fred A. M. G.;
van Rooij, Arno;
Berden, Giel;
Huigen, Marleen C. D. G.;
Kluijtmans, Leo A. J.;
Peters, Tessa M. A.;
Al-Shekaili, Hilal H.;
Leavitt, Blair R.;
de Vrieze, Erik;
Broekman, Sanne;
van Wijk, Erwin;
Tseng, Laura A.;
Kulkarni, Purva;
Rutjes, Floris P. J. T.;
Mecinović, Jasmin;
Struys, Eduard A.;
Jansen, Laura A.

Publication type:

journal article

Mass spectrometry imaging in chemical ecology.

Published in:

Berichte aus dem Julius Kühn-Institut, 2019, n. 204, p. 76

By:

Svatoš, Aleš;
Kaftan, Filip;
Bartels, Benjamin;
Kulkarni, Purva

Publication type:

Article

A multi-omics data analysis workflow packaged as a FAIR Digital Object.

Published in:

GigaScience, 2024, v. 13, n. 1, p. 1, doi. 10.1093/gigascience/giad115

By:

Niehues, Anna;
de Visser, Casper;
Hagenbeek, Fiona A;
Kulkarni, Purva;
Pool, René;
Karu, Naama;
Kindt, Alida S D;
Singh, Gurnoor;
Vermeiren, Robert R J M;
Boomsma, Dorret I;
van Dongen, Jenny;
't Hoen, Peter A C;
van Gool, Alain J

Publication type:

Article

Proteomic profiling of striatal tissue of a rat model of Parkinson's disease after implantation of collagen‐encapsulated human umbilical cord mesenchymal stem cells.

Published in:

Journal of Tissue Engineering & Regenerative Medicine, 2020, v. 14, n. 8, p. 1077, doi. 10.1002/term.3081

By:

Santaella, Anna;
Wessels, Hans J.C.T.;
Kulkarni, Purva;
Gloerich, Jolein;
Kuiperij, Bea;
Bloem, Bastiaan R.;
Gool, Alain J.;
Cabré, Silvia;
Alamilla, Verónica;
Verbeek, Marcel M.

Publication type:

Article

Management of chyle leak in right side neck dissection: a rare case and review of literature (a case report).

Published in:

2021

By:

Deshmukh, Rahul;
Kulkarni, Purva;
Bhutekar, Umesh;
Kala, Atul;
Richhariya, Shivam;
Tawari, Hitesh

Publication type:

Case Study

Secondary ion mass spectrometry imaging and multivariate data analysis reveal co-aggregation patterns of Populus trichocarpa leaf surface compounds on a micrometer scale.

Published in:

Plant Journal, 2018, v. 93, n. 1, p. 193, doi. 10.1111/tpj.13763

By:

Kulkarni, Purva;
Dost, Mina;
Bulut, Özgül Demir;
Welle, Alexander;
Böcker, Sebastian;
Boland, Wilhelm;
Svatoš, Aleš

Publication type:

Article

Low-Level Laser Therapy Role in Surgical Extractions: An Original Research.

Published in:

Journal of Pharmacy & Bioallied Sciences, 2022, v. 14, p. S245, doi. 10.4103/jpbs.jpbs_707_21

By:

Almasri, Mazen Ahmad;
Mandal, Nag Bhushan;
Kulkarni, Purva;
Raj, Ankita;
Zeya, Asfar;
Mann, Navaljeet Kaur;
Tiwari, Rahul V. C.

Publication type:

Article

Ten quick tips for building FAIR workflows.

Published in:

PLoS Computational Biology, 2023, v. 19, n. 9, p. 1, doi. 10.1371/journal.pcbi.1011369

By:

de Visser, Casper;
Johansson, Lennart F.;
Kulkarni, Purva;
Mei, Hailiang;
Neerincx, Pieter;
Joeri van der Velde, K.;
Horvatovich, Péter;
van Gool, Alain J.;
Swertz, Morris A.;
Hoen, Peter A. C. 't;
Niehues, Anna

Publication type:

Article

Mass spectrometry imaging of surface lipids on intact Drosophila melanogaster flies.

Published in:

Journal of Mass Spectrometry, 2014, v. 49, n. 3, p. 223, doi. 10.1002/jms.3331

By:

Kaftan, Filip;
Vrkoslav, Vladimír;
Kynast, Philipp;
Kulkarni, Purva;
Böcker, Sebastian;
Cvačka, Josef;
Knaden, Markus;
Svatoš, Aleš

Publication type:

Article