Works matching AU Kuehl, Jennifer V.

Results: 28

Identifying the Basal Angiosperm Node in Chloroplast Genome Phylogenies: Sampling One's Way Out of the Felsenstein Zone.

Published in:

Molecular Biology & Evolution, 2005, v. 22, n. 10, p. 1948, doi. 10.1093/molbev/msi191

By:

Leebens-Mack, Jim;
Raubeson, Linda A.;
Liying Cui;
Kuehl, Jennifer V.;
Fourcade, Matthew H.;
Chumley, Timothy W.;
Boore, Jeffrey L.;
Jansen, Robert K.;
dePamphilis, Claude W.

Publication type:

Article

Genomic and environmental controls on Castellaniella biogeography in an anthropogenically disturbed subsurface.

Published in:

Environmental Microbiome, 2024, v. 19, n. 1, p. 1, doi. 10.1186/s40793-024-00570-9

By:

Goff, Jennifer L.;
Szink, Elizabeth G.;
Durrence, Konnor L.;
Lui, Lauren M.;
Nielsen, Torben N.;
Kuehl, Jennifer V.;
Hunt, Kristopher A.;
Chandonia, John-Marc;
Huang, Jiawen;
Thorgersen, Michael P.;
Poole II, Farris L.;
Stahl, David A.;
Chakraborty, Romy;
Deutschbauer, Adam M.;
Arkin, Adam P.;
Adams, Michael W. W.

Publication type:

Article

A COMPARATIVE ANALYSIS OF THE LACTUCA AND HELIANTHUS (ASTERACEAE) PLASTID GENOMES: IDENTIFICATION OF DIVERGENT REGIONS AND CATEGORIZATION OF SHARED REPEATS.

Published in:

American Journal of Botany, 2007, v. 94, n. 3, p. 302, doi. 10.3732/ajb.94.3.302

By:

Timme, Ruth E.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
Jansen, Robert K.

Publication type:

Article

High-throughput protein characterization by complementation using DNA barcoded fragment libraries.

Published in:

Molecular Systems Biology, 2024, v. 20, n. 11, p. 1207, doi. 10.1038/s44320-024-00068-z

By:

Biggs, Bradley W;
Price, Morgan N;
Lai, Dexter;
Escobedo, Jasmine;
Fortanel, Yuridia;
Huang, Yolanda Y;
Kim, Kyoungmin;
Trotter, Valentine V;
Kuehl, Jennifer V;
Lui, Lauren M;
Chakraborty, Romy;
Deutschbauer, Adam M;
Arkin, Adam P

Publication type:

Article

Correction: Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics.

Published in:

2019

By:

Price, Morgan N.;
Zane, Grant M.;
Kuehl, Jennifer V.;
Melnyk, Ryan A.;
Wall, Judy D.;
Deutschbauer, Adam M.;
Arkin, Adam P.

Publication type:

Correction Notice

Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae.

Published in:

Journal of Molecular Evolution, 2010, v. 70, n. 2, p. 149, doi. 10.1007/s00239-009-9317-3

By:

Guisinger, Mary M.;
Chumley, Timothy W.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
Jansen, Robert K.

Publication type:

Article

Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions.

Published in:

Journal of Molecular Evolution, 2008, v. 67, n. 6, p. 696, doi. 10.1007/s00239-008-9180-7

By:

Zhengqiu Cai;
Guisinger, Mary;
Hyi-Gyung Kim;
Ruck, Elizabeth;
Blazier, John C.;
McMurtry, Vanity;
Kuehl, Jennifer V.;
Boore, Jeffrey;
Jansen, Robert K.

Publication type:

Article

The energy-conserving electron transfer system used by D esulfovibrio alaskensis strain G20 during pyruvate fermentation involves reduction of endogenously formed fumarate and cytoplasmic and membrane-bound complexes, Hdr-Flox and Rnf.

Published in:

Environmental Microbiology, 2014, v. 16, n. 11, p. 3463, doi. 10.1111/1462-2920.12405

By:

Meyer, Birte;
Kuehl, Jennifer V.;
Price, Morgan N.;
Ray, Jayashree;
Deutschbauer, Adam M.;
Arkin, Adam P.;
Stahl, David A.

Publication type:

Article

Control of methionine metabolism by the SahR transcriptional regulator in Proteobacteria.

Published in:

Environmental Microbiology, 2014, v. 16, n. 1, p. 1, doi. 10.1111/1462-2920.12273

By:

Novichkov, Pavel S.;
Li, Xiaoqing;
Kuehl, Jennifer V.;
Deutschbauer, Adam M.;
Arkin, Adam P.;
Price, Morgan N.;
Rodionov, Dmitry A.

Publication type:

Article

System-Wide Adaptations of Desulfovibrio alaskensis G20 to Phosphate-Limited Conditions.

Published in:

PLoS ONE, 2016, v. 11, n. 12, p. 1, doi. 10.1371/journal.pone.0168719

By:

Bosak, Tanja;
Schubotz, Florence;
de Santiago-Torio, Ana;
Kuehl, Jennifer V.;
Carlson, Hans K.;
Watson, Nicki;
Daye, Mirna;
Summons, Roger E.;
Arkin, Adam P.;
Deutschbauer, Adam M.

Publication type:

Article

Complete plastid genome sequences suggest strong selection forretention of photosynthetic genes in the parasitic plant genusCuscuta.

Published in:

BMC Plant Biology, 2007, v. 7, p. 57, doi. 10.1186/1471-2229-7-57

By:

McNeal, Joel R.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
de Pamphilis, Claude W.

Publication type:

Article

Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages.

Published in:

BMC Evolutionary Biology, 2010, v. 10, p. 321, doi. 10.1186/1471-2148-10-321

By:

Karol, Kenneth G.;
Arumuganathan, Kathiravetpillai;
Boore, Jeffrey L.;
Duffy, Aaron M.;
Everett, Karin D. E.;
Hall, John D.;
Hansen, S. Kellon;
Kuehl, Jennifer V.;
Mandoli, Dina F.;
Mishler, Brent D.;
Olmstead, Richard G.;
Renzaglia, Karen S.;
Wolf, Paul G.

Publication type:

Article

The complete plastid genome sequence of Welwitschia mirabilis: an unusually compact plastome with accelerated divergence rates.

Published in:

BMC Evolutionary Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2148-8-130

By:

McCoy, Skip R.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
Raubeson, Linda A.

Publication type:

Article

Extreme Reconfiguration of Plastid Genomes in the Angiosperm Family Geraniaceae: Rearrangements, Repeats, and Codon Usage.

Published in:

Molecular Biology & Evolution, 2011, v. 28, n. 1, p. 583, doi. 10.1093/molbev/msq229

By:

Guisinger, Mary M.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
Jansen, Robert K.

Publication type:

Article

Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis.

Published in:

Molecular Biology & Evolution, 2008, v. 25, n. 2, p. 393, doi. 10.1093/molbev/msm267

By:

Wickett, Norman J.;
Zhang, Yan;
Hansen, S. Kellon;
Roper, Jessie M.;
Kuehl, Jennifer V.;
Plock, Sheila A.;
Wolf, Paul G.;
dePamphilis, Claude W.;
Boore, Jeffrey L.;
Goffinet, Bernard

Publication type:

Article

The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20.

Published in:

Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00577

By:

Price, Morgan N.;
Ray, Jayashree;
Wetmore, Kelly M.;
Kuehl, Jennifer V.;
Bauer, Stefan;
Deutschbauer, Adam M.;
Arkin, Adam P.

Publication type:

Article

Selective carbon sources influence the end products of microbial nitrate respiration.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2020, v. 14, n. 8, p. 2034, doi. 10.1038/s41396-020-0666-7

By:

Carlson, Hans K.;
Lui, Lauren M.;
Price, Morgan N.;
Kazakov, Alexey E.;
Carr, Alex V.;
Kuehl, Jennifer V.;
Owens, Trenton K.;
Nielsen, Torben;
Arkin, Adam P.;
Deutschbauer, Adam M.

Publication type:

Article

The selective pressures on the microbial community in a metal-contaminated aquifer.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 4, p. 937, doi. 10.1038/s41396-018-0328-1

By:

Carlson, Hans K.;
Price, Morgan N.;
Callaghan, Mark;
Aaring, Alex;
Chakraborty, Romy;
Liu, Hualan;
Kuehl, Jennifer V.;
Arkin, Adam P.;
Deutschbauer, Adam M.

Publication type:

Article

Mechanisms of direct inhibition of the respiratory sulfate-reduction pathway by (per)chlorate and nitrate.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 6, p. 1295, doi. 10.1038/ismej.2014.216

By:

Carlson, Hans K;
Kuehl, Jennifer V;
Hazra, Amrita B;
Justice, Nicholas B;
Stoeva, Magdalena K;
Sczesnak, Andrew;
Mullan, Mark R;
Iavarone, Anthony T;
Engelbrektson, Anna;
Price, Morgan N;
Deutschbauer, Adam M;
Arkin, Adam P;
Coates, John D

Publication type:

Article

Indirect and suboptimal control of gene expression is widespread in bacteria.

Published in:

Molecular Systems Biology, 2013, v. 9, n. 1, p. 1, doi. 10.1038/msb.2013.16

By:

Price, Morgan N.;
Deutschbauer, Adam M.;
Skerker, Jeffrey M.;
Wetmore, Kelly M.;
Ruths, Troy;
Mar, Jordan S.;
Kuehl, Jennifer V.;
Wenjun Shao;
Arkin, Adam P.

Publication type:

Article

Dissimilatory Sulfate Reduction Under High Pressure by <italic>Desulfovibrio alaskensis</italic> G20.

Published in:

Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01465

By:

Williamson, Adam J.;
Carlson, Hans K.;
Kuehl, Jennifer V.;
Huang, Leah L.;
Iavarone, Anthony T.;
Deutschbauer, Adam;
Coates, John D.

Publication type:

Article

The Gut as Reservoir of Antibiotic Resistance: Microbial Diversity of Tetracycline Resistance in Mother and Infant.

Published in:

PLoS ONE, 2011, v. 6, n. 6, p. 1, doi. 10.1371/journal.pone.0021644

By:

de Vries, Lisbeth E.;
Vallès, Yvonne;
Agersø, Yvonne;
Vaishampayan, Parag A.;
García-Montaner, Andrea;
Kuehl, Jennifer V.;
Christensen, Henrik;
Barlow, Miriam;
Francino, M. Pilar

Publication type:

Article

Parallel Loss of Plastid Introns and Their Maturase in the Genus Cuscuta.

Published in:

PLoS ONE, 2009, v. 4, n. 6, p. 1, doi. 10.1371/journal.pone.0005982

By:

McNeal, Joel R.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
Leebens-Mack, Jim;
dePamphilis, Claude W.

Publication type:

Article

Large-scale genetic characterization of the model sulfate-reducing bacterium, Desulfovibrio vulgaris Hildenborough.

Published in:

Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2023.1095191

By:

Trotter, Valentine V.;
Shatsky, Maxim;
Price, Morgan N.;
Juba, Thomas R.;
Zane, Grant M.;
De León, Kara B.;
Majumder, Erica L.-W.;
Gui, Qin;
Ali, Rida;
Wetmore, Kelly M.;
Kuehl, Jennifer V.;
Arkin, Adam P.;
Wall, Judy D.;
Deutschbauer, Adam M.;
Chandonia, John-Marc;
Butland, Gareth P.

Publication type:

Article

A Defined Medium for Cultivation and Exometabolite Profiling of Soil Bacteria.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.855331

By:

de Raad, Markus;
Li, Yifan V.;
Kuehl, Jennifer V.;
Andeer, Peter F.;
Kosina, Suzanne M.;
Hendrickson, Andrew;
Saichek, Nicholas R.;
Golini, Amber N.;
Han, La Zhen;
Wang, Ying;
Bowen, Benjamin P.;
Deutschbauer, Adam M.;
Arkin, Adam P.;
Chakraborty, Romy;
Northen, Trent R.

Publication type:

Article

Systematics and plastid genome evolution of the crypticallyphotosynthetic parasitic plant genus Cuscuta (Convolvulaceae).

Published in:

BMC Biology, 2007, v. 5, p. 55, doi. 10.1186/1741-7007-5-55

By:

McNeal, Joel R.;
Arumugunathan, Kathiravetpilla;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
dePamphilis, Claude W.

Publication type:

Article

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics.

Published in:

PLoS Genetics, 2018, v. 14, n. 1, p. 1, doi. 10.1371/journal.pgen.1007147

By:

Price, Morgan N.;
Zane, Grant M.;
Kuehl, Jennifer V.;
Melnyk, Ryan A.;
Wall, Judy D.;
Deutschbauer, Adam M.;
Arkin, Adam P.

Publication type:

Article

Chloroplast genome sequence of the mossTortula ruralis: gene content, polymorphism, andstructural arrangement relative to other greenplant chloroplast genomes.

Published in:

BMC Genomics, 2010, v. 11, p. 143, doi. 10.1186/1471-2164-11-143

By:

Oliver, Melvin J.;
Murdock, Andrew G.;
Mishler, Brent D.;
Kuehl, Jennifer V.;
Boore, Jeffrey L.;
Mandoli, Dina F.;
Everett, Karin D. E.;
Wolf, Paul G.;
Duffy, Aaron M.;
Karol, Kenneth G.

Publication type:

Article