Found: 16
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The influence of Holliday junction sequence and dynamics on DNA crystal self-assembly.
- Published in:
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30779-6
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- Article
An intricate balance of hydrogen bonding, ion atmosphere and dynamics facilitates a seamless uracil to cytosine substitution in the U-turn of the neomycin-sensing riboswitch.
- Published in:
- Nucleic Acids Research, 2018, v. 46, n. 13, p. 6528, doi. 10.1093/nar/gky490
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- Article
Structural study of the Fox-1 RRM protein hydration reveals a role for key water molecules in RRM-RNA recognition.
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- Nucleic Acids Research, 2017, v. 45, n. 13, p. 8046, doi. 10.1093/nar/gkx418
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- Article
Coordination between the polymerase and RNase H activity of HIV-1 reverse transcriptase.
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- Nucleic Acids Research, 2017, v. 45, n. 6, p. 3341, doi. 10.1093/nar/gkx004
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- Article
Synergy between NMR measurements and MD simulations of protein/RNA complexes: application to the RRMs, the most common RNA recognition motifs.
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- Nucleic Acids Research, 2016, v. 44, n. 13, p. 6452, doi. 10.1093/nar/gkw438
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- Article
Extended molecular dynamics of a c-kit promoter quadruplex.
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- Nucleic Acids Research, 2015, v. 43, n. 18, p. 8673, doi. 10.1093/nar/gkv785
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- Article
Structural dynamics of possible late-stage intermediates in folding of quadruplex DNA studied by molecular simulations.
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- Nucleic Acids Research, 2013, v. 41, n. 14, p. 7128, doi. 10.1093/nar/gkt412
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- Article
RuvC uses dynamic probing of the Holliday junction to achieve sequence specificity and efficient resolution.
- Published in:
- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11900-8
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- Article
DNA Damage Changes Distribution Pattern and Levels of HP1 Protein Isoforms in the Nucleolus and Increases Phosphorylation of HP1β-Ser88.
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- Cells (2073-4409), 2019, v. 8, n. 9, p. 1097, doi. 10.3390/cells8091097
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- Article
N-terminal domain of polypyrimidine-tract binding protein is a dynamic folding platform for adaptive RNA recognition.
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- Nucleic Acids Research, 2024, v. 52, n. 17, p. 10683, doi. 10.1093/nar/gkae713
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- Article
Structure of an internal loop motif with three consecutive U•U mismatches from stem–loop 1 in the 3′-UTR of the SARS-CoV-2 genomic RNA.
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- Nucleic Acids Research, 2024, v. 52, n. 11, p. 6687, doi. 10.1093/nar/gkae349
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- Article
Spontaneous binding of single-stranded RNAs to RRM proteins visualized by unbiased atomistic simulations with a rescaled RNA force field.
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- Nucleic Acids Research, 2022, v. 50, n. 21, p. 12480, doi. 10.1093/nar/gkac1106
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- Article
Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00631-3
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- Article
Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-20481-w
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- Article
How to understand atomistic molecular dynamics simulations of RNA and protein- RNA complexes?
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- Wiley Interdisciplinary Reviews: RNA, 2017, v. 8, n. 3, p. n/a, doi. 10.1002/wrna.1405
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- Article
Molecular basis for the increased affinity of an RNA recognition motif with re-engineered specificity: A molecular dynamics and enhanced sampling simulations study.
- Published in:
- PLoS Computational Biology, 2018, v. 14, n. 12, p. 1, doi. 10.1371/journal.pcbi.1006642
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- Article