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The Mutant Mouse Resource and Research Center (MMRRC): the NIH-supported National Public Repository and Distribution Archive of Mutant Mouse Models in the USA.
- Published in:
- Mammalian Genome, 2022, v. 33, n. 1, p. 203, doi. 10.1007/s00335-021-09894-0
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- Article
Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22100-8
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- Article
Low-pass whole genome bisulfite sequencing of neonatal dried blood spots identifies a role for RUNX1 in Down syndrome DNA methylation profiles.
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- Human Molecular Genetics, 2020, v. 29, n. 21, p. 3465, doi. 10.1093/hmg/ddaa218
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- Article
Association of the Lactase Persistence Haplotype Block With Disease Risk in Populations of European Descent.
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- Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.558762
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- Article
A comparative analysis of chromatin accessibility in cattle, pig, and mouse tissues.
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- BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07078-9
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- Article
Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes.
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- BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-3416-y
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- Article
Association of Lactase Persistence Genotypes (rs4988235) and Ethnicity with Dairy Intake in a Healthy U.S. Population.
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- Nutrients, 2019, v. 11, n. 8, p. 1860, doi. 10.3390/nu11081860
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- Article
Fecal metatranscriptomics of macaques with idiopathic chronic diarrhea reveals altered mucin degradation and fucose utilization.
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- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0664-z
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- Article
Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species.
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- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5037-7
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- Article
The collaborative effect of scientific meetings: A study of the International Milk Genomics Consortium.
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- PLoS ONE, 2018, v. 13, n. 8, p. 1, doi. 10.1371/journal.pone.0201637
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- Article
SAMSA2: a standalone metatranscriptome analysis pipeline.
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- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2189-z
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- Article
Autosomal Trisomy and Triploidy Are Corrected During Female Meiosis in Caenorhabditis elegans.
- Published in:
- Genetics, 2017, v. 207, n. 3, p. 911, doi. 10.1534/genetics.117.300259
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- Article
Genome assembly with in vitro proximity ligation data and whole-genome triplication in lettuce.
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- Nature Communications, 2017, v. 8, n. 4, p. 14953, doi. 10.1038/ncomms14953
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- Article
Dental Pulp Stem Cells Model Early Life and Imprinted DNA Methylation Patterns.
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- Stem Cells, 2017, v. 35, n. 4, p. 981, doi. 10.1002/stem.2563
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- Article
Intron sequences that stimulate gene expression in Arabidopsis.
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- Plant Molecular Biology, 2016, v. 92, n. 3, p. 337, doi. 10.1007/s11103-016-0516-1
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- Article
SAMSA: a comprehensive metatranscriptome analysis pipeline.
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- BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1270-8
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- Article
GC skew is a conserved property of unmethylated CpG island promoters across vertebrates.
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- Nucleic Acids Research, 2015, v. 43, n. 20, p. 9729, doi. 10.1093/nar/gkv811
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- Article
StochHMM: a flexible hidden Markov model tool and C++ library.
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- Bioinformatics, 2014, v. 30, n. 11, p. 1625, doi. 10.1093/bioinformatics/btu057
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- Article
Adjustment of RNA‐Seq data for the effect of highly abundant transcripts: a case study in milk production (622.4).
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- FASEB Journal, 2014, v. 28, p. N.PAG, doi. 10.1096/fasebj.28.1_supplement.622.4
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- Article
Insights into infant nutrition through cross‐species proteomic comparison of primate milks (623.9).
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- FASEB Journal, 2014, v. 28, p. N.PAG, doi. 10.1096/fasebj.28.1_supplement.623.9
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- Article
Sequencing the transcriptome of milk production: milk trumps mammary tissue (622.2).
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- FASEB Journal, 2014, v. 28, p. N.PAG, doi. 10.1096/fasebj.28.1_supplement.622.2
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- Article
Genomics: the state of the art in RNA-seq analysis.
- Published in:
- Nature Methods, 2013, v. 10, n. 12, p. 1165, doi. 10.1038/nmeth.2735
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- Article
From Genes to Milk: Genomic Organization and Epigenetic Regulation of the Mammary Transcriptome.
- Published in:
- PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0075030
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- Article
Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution.
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- Genome Biology, 2013, v. 14, n. 1, p. 1, doi. 10.1186/gb-2013-14-1-r10
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- Article
The effects of a stimulating intron on the expression of heterologous genes in Arabidopsis thaliana.
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- Plant Biotechnology Journal, 2013, v. 11, n. 5, p. 555, doi. 10.1111/pbi.12043
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- Article
Sequencing the transcriptome of milk production: milk trumps mammary tissue.
- Published in:
- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-872
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- Article
Holocentric chromosomes: convergent evolution, meiotic adaptations, and genomic analysis.
- Published in:
- Chromosome Research, 2012, v. 20, n. 5, p. 579, doi. 10.1007/s10577-012-9292-1
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- Article
G-NEST: a gene neighborhood scoring tool to identify co-conserved, co-expressed genes.
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- BMC Bioinformatics, 2012, v. 13, n. 1, p. 1, doi. 10.1186/1471-2105-13-253
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- Article
First fungal genome sequence from Africa: A preliminary analysis.
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- South African Journal of Science, 2012, v. 108, n. 1/2, p. 1, doi. 10.4102/sajs.v108i1/2.537
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- Article
Comparative and functional analysis of intron-mediated enhancement signals reveals conserved features among plants.
- Published in:
- Nucleic Acids Research, 2011, v. 39, n. 13, p. 5328, doi. 10.1093/nar/gkr043
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- Article
Characterization of the Contradictory Chromatin Signatures at the 3' Exons of Zinc Finger Genes.
- Published in:
- PLoS ONE, 2011, v. 6, n. 2, p. 1, doi. 10.1371/journal.pone.0017121
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- Article
Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. 3, p. e13, doi. 10.1093/nar/gkp1012
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- Article
The Pinus taeda genome is characterized by diverseand highly diverged repetitive sequences.
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- BMC Genomics, 2010, v. 11, p. 420, doi. 10.1186/1471-2164-11-420
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- Article
Bind-n-Seq: high-throughput analysis of in vitro protein–DNA interactions using massively parallel sequencing.
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- Nucleic Acids Research, 2009, v. 37, n. 22, p. e151, doi. 10.1093/nar/gkp802
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- Article
Assessing the gene space in draft genomes.
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- Nucleic Acids Research, 2009, v. 37, n. 1, p. 289, doi. 10.1093/nar/gkn916
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- Article
Longer First Introns Are a General Property of Eukaryotic Gene Structure.
- Published in:
- PLoS ONE, 2008, v. 3, n. 8, p. 1, doi. 10.1371/journal.pone.0003093
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- Article
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes.
- Published in:
- Bioinformatics, 2007, v. 23, n. 9, p. 1061, doi. 10.1093/bioinformatics/btm071
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- Article
Sorghum Genome Sequencing by Methylation Filtration.
- Published in:
- PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030013
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- Article
Sorghum Genome Sequencing by Methylation Filtration.
- Published in:
- PLoS Biology, 2005, v. 3, n. 1, p. 103, doi. 10.1371/journal.pbio.0030013
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- Article
A probabilistic model of 3′ end formation in Caenorhabditis elegans.
- Published in:
- Nucleic Acids Research, 2004, v. 32, n. 11, p. 3392, doi. 10.1093/nar/gkh656
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- Article
Gene finding in novel genomes.
- Published in:
- BMC Bioinformatics, 2004, v. 5, p. 59, doi. 10.1186/1471-2105-5-59
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- Article
Integrating genomic homology into gene structure prediction.
- Published in:
- Bioinformatics, 2001, v. 17, p. 140, doi. 10.1093/bioinformatics/17.suppl_1.s140
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- Article
MaskerAid : a performance enhancement to RepeatMasker.
- Published in:
- Bioinformatics, 2000, v. 16, n. 11, p. 1040, doi. 10.1093/bioinformatics/16.11.1040
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- Article
MPBLAST : improved BLAST performance with multiplexed queries.
- Published in:
- Bioinformatics, 2000, v. 16, n. 11, p. 1052, doi. 10.1093/bioinformatics/16.11.1052
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- Article
A general approach to single-nucleotide polymorphism discovery.
- Published in:
- Nature Genetics, 1999, v. 23, n. 4, p. 452, doi. 10.1038/70570
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- Article