Works by Koren, Omry

Results: 65

Bridging the bench‐to‐bedside divide in microbiome research.

Published in:

Clinical & Translational Medicine, 2025, v. 15, n. 5, p. 1, doi. 10.1002/ctm2.70358

By:

Turjeman, Sondra;
Koren, Omry

Publication type:

Article

Unravelling the effects of the environment and host genotype on the gut microbiome.

Published in:

Nature Reviews Microbiology, 2011, v. 9, n. 4, p. 279, doi. 10.1038/nrmicro2540

By:

Spor, Aymé;
Koren, Omry;
Ley, Ruth

Publication type:

Article

The hologenome theory disregards the coral holobiont: reply from Rosenberg et al.

Published in:

2007

By:

Rosenberg, Eugene;
Koren, Omry;
Reshef, Leah;
Efrony, Rotem;
Zilber-Rosenberg, Ilana

Publication type:

Letter

The role of microorganisms in coral health, disease and evolution.

Published in:

Nature Reviews Microbiology, 2007, v. 5, n. 5, p. 355, doi. 10.1038/nrmicro1635

By:

Rosenberg, Eugene;
Koren, Omry;
Reshef, Leah;
Efrony, Rotem;
Zilber-Rosenberg, Ilana

Publication type:

Article

Bacteria Associated with the Bleached and Cave Coral Oculina patagonica.

Published in:

Microbial Ecology, 2008, v. 55, n. 3, p. 523, doi. 10.1007/s00248-007-9297-z

By:

Koren, Omry;
Rosenberg, Eugene

Publication type:

Article

Context-dependent differences in the functional responses of Lactobacillaceae strains to fermentable sugars.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.949932

By:

Suissa, Ronit;
Oved, Rela;
Maan, Harsh;
Hadad, Uzi;
Gilhar, Omri;
Meijler, Michael M.;
Koren, Omry;
Kolodkin-Gal, Ilana

Publication type:

Article

Microbes Saving Lives and Reducing Suffering.

Published in:

Microbial Biotechnology, 2025, v. 18, n. 1, p. 1, doi. 10.1111/1751-7915.70068

By:

Timmis, Kenneth;
Karahan, Zeynep Ceren;
Ramos, Juan Luis;
Koren, Omry;
Pérez‐Cobas, Ana Elena;
Steward, Karen;
de Lorenzo, Victor;
Caselli, Elisabetta;
Douglas, Margaret;
Schwab, Clarissa;
Rivero, Virginia;
Giraldo, Rafael;
Garmendia, Junkal;
Turner, Raymond J.;
Perlmutter, Jessamyn;
Borrero de Acuña, José M.;
Nikel, Pablo Ivan;
Bonnet, Jerome;
Sessitsch, Angela;
Timmis, James K.

Publication type:

Article

Using the microbiome in clinical practice.

Published in:

Microbial Biotechnology, 2022, v. 15, n. 1, p. 129, doi. 10.1111/1751-7915.13971

By:

Turjeman, Sondra;
Koren, Omry

Publication type:

Article

The Era of Fecal Microbiota Transplantation.

Published in:

Israel Medical Association Journal, 2015, v. 17, n. 8, p. 515

By:

Kuperman, Amir A.;
Koren, Omry

Publication type:

Article

Signs of aging in midlife: physical function and sex differences in microbiota.

Published in:

GeroScience, 2024, v. 46, n. 2, p. 1477, doi. 10.1007/s11357-023-00905-3

By:

Tzemah-Shahar, Roy;
Turjeman, Sondra;
Sharon, Efrat;
Gamliel, Gila;
Hochner, Hagit;
Koren, Omry;
Agmon, Maayan

Publication type:

Article

90. Fecal Microbiota Transplantation in Metastatic Melanoma Patients Resistant to Anti-PD-1 Treatment.

Published in:

Open Forum Infectious Diseases, 2019, v. 6, p. S7, doi. 10.1093/ofid/ofz359.014

By:

Youngster, Ilan;
Baruch, Erez;
Katz, Lior;
Lahat, Adi;
Brosh-Nissimov, Tal;
Schachter, Jacob;
Koren, Omry;
Markel, Gal;
Boursi, Ben

Publication type:

Article

Tryptophol Acetate and Tyrosol Acetate, Small-Molecule Metabolites Identified in a Probiotic Mixture, Inhibit Hyperinflammation.

Published in:

Journal of Innate Immunity, 2023, v. 15, n. 1, p. 531, doi. 10.1159/000529782

By:

Malka, Orit;
Malishev, Ravit;
Bersudsky, Marina;
Rajendran, Manikandan;
Krishnamohan, Mathumathi;
Shaik, Jakeer;
Chamovitz, Daniel A.;
Tikhonov, Evgeni;
Sultan, Eliya;
Koren, Omry;
Apte, Ron N.;
Rosental, Benyamin;
Voronov, Elena;
Jelinek, Raz

Publication type:

Article

Branched Chain Fatty Acids Reduce the Incidence of Necrotizing Enterocolitis and Alter Gastrointestinal Microbial Ecology in a Neonatal Rat Model.

Published in:

PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0029032

By:

Ran-Ressler, Rinat R.;
Khailova, Ludmila;
Arganbright, Kelly M.;
Adkins-Rieck, Camille K.;
Jouni, Zeina E.;
Koren, Omry;
Ley, Ruth E.;
Brenna, J. Thomas;
Dvorak, Bohuslav

Publication type:

Article

Bacteroides is increased in an autism cohort and induces autism-relevant behavioral changes in mice in a sex-dependent manner.

Published in:

NPJ Biofilms & Microbiomes, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41522-023-00469-2

By:

Carmel, Julie;
Ghanayem, Nasreen;
Mayouf, Rasha;
Saleev, Natalia;
Chaterjee, Ipsita;
Getselter, Dmitriy;
Tikhonov, Evgeny;
Turjeman, Sondra;
Shaalan, Monia;
Khateeb, Saleh;
Kuzminsky, Alla;
Kvetniy-Ferdman, Netta;
Kronos, Tanya;
Bretler-Zager, Tali;
Koren, Omry;
Elliott, Evan

Publication type:

Article

Metabolic inputs in the probiotic bacterium Lacticaseibacillus rhamnosus contribute to cell-wall remodeling and increased fitness.

Published in:

NPJ Biofilms & Microbiomes, 2023, v. 9, n. 1, p. 1, doi. 10.1038/s41522-023-00431-2

By:

Suissa, Ronit;
Olender, Tsviya;
Malitsky, Sergey;
Golani, Ofra;
Turjeman, Sondra;
Koren, Omry;
Meijler, Michael M.;
Kolodkin-Gal, Ilana

Publication type:

Article

The Coral Probiotic Hypothesis.

Published in:

Environmental Microbiology, 2006, v. 8, n. 12, p. 2068, doi. 10.1111/j.1462-2920.2006.01148.x

By:

Reshef, Leah;
Koren, Omry;
Loya, Yossi;
Zilber-Rosenberg, Ilana;
Rosenberg, Eugene

Publication type:

Article

The intersection of undernutrition, microbiome, and child development in the first years of life.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39285-9

By:

Fontaine, Fanette;
Turjeman, Sondra;
Callens, Karel;
Koren, Omry

Publication type:

Article

Successful weight regain attenuation by autologous fecal microbiota transplantation is associated with non-core gut microbiota changes during weight loss; randomized controlled trial.

Published in:

Gut Microbes, 2023, v. 15, n. 2, p. 1, doi. 10.1080/19490976.2023.2264457

By:

Kamer, Omer;
Rinott, Ehud;
Tsaban, Gal;
Kaplan, Alon;
Yaskolka Meir, Anat;
Zelicha, Hila;
Knights, Dan;
Tuohy, Kieran;
Fava, Francesca;
Uwe Scholz, Matthias;
Ziv, Oren;
Rubin, Elad;
Blüher, Matthias;
Stumvoll, Michael;
Ceglarek, Uta;
Clément, Karine;
Koren, Omry;
Hu, Frank B.;
Stampfer, Meir J.;
Wang, Dong D.

Publication type:

Article

Ordering taxa in image convolution networks improves microbiome-based machine learning accuracy.

Published in:

Gut Microbes, 2023, v. 15, n. 1, p. 1, doi. 10.1080/19490976.2023.2224474

By:

Shtossel, Oshrit;
Isakov, Haim;
Turjeman, Sondra;
Koren, Omry;
Louzoun, Yoram

Publication type:

Article

The aging mouse microbiome has obesogenic characteristics.

Published in:

Genome Medicine, 2020, v. 12, n. 1, p. N.PAG, doi. 10.1186/s13073-020-00784-9

By:

Binyamin, Dana;
Werbner, Nir;
Nuriel-Ohayon, Meital;
Uzan, Atara;
Mor, Hadar;
Abbas, Atallah;
Ziv, Oren;
Teperino, Raffaele;
Gutman, Roee;
Koren, Omry

Publication type:

Article

Role of Tryptophan in Microbiota-Induced Depressive-Like Behavior: Evidence From Tryptophan Depletion Study.

Published in:

Frontiers in Behavioral Neuroscience, 2019, p. N.PAG, doi. 10.3389/fnbeh.2019.00123

By:

Lukić, Iva;
Getselter, Dmitriy;
Koren, Omry;
Elliott, Evan

Publication type:

Article

Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 1, p. 94, doi. 10.1038/ismej.2011.82

By:

Werner, Jeffrey J;
Koren, Omry;
Hugenholtz, Philip;
DeSantis, Todd Z;
Walters, William A;
Caporaso, J Gregory;
Angenent, Largus T;
Knight, Rob;
Ley, Ruth E

Publication type:

Article

Supervised classification of microbiota mitigates mislabeling errors.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 4, p. 570, doi. 10.1038/ismej.2010.148

By:

Knights, Dan;
Kuczynski, Justin;
Koren, Omry;
Ley, Ruth E;
Field, Dawn;
Knight, Rob;
DeSantis, Todd Z;
Kelley, Scott T

Publication type:

Article

The intestinal microbiome, weight, and metabolic changes in women treated by adjuvant chemotherapy for breast and gynecological malignancies.

Published in:

2020

By:

Uzan-Yulzari, Atara;
Morr, Maya;
Tareef-Nabwani, Hala;
Ziv, Oren;
Magid-Neriya, Dafna;
Armoni, Ran;
Muller, Efrat;
Leibovici, Anca;
Borenstein, Elhanan;
Louzoun, Yoram;
Shai, Ayelet;
Koren, Omry

Publication type:

journal article

Probiotic Engineering: Resolving How Fermentable Sugars Affect Aggregation, Adhesion, and Aggression in Lactobacillaceae †.

Published in:

Biology & Life Sciences Forum, 2023, v. 21, n. 1, p. 31, doi. 10.3390/blsf2023021031

By:

Suissa, Ronit;
Meijler, Michael;
Koren, Omry;
Kolodkin-Gal, Ilana

Publication type:

Article

The effect of testosterone on the gut microbiome in mice.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06470-5

By:

Moadi, Lelyan;
Turjeman, Sondra;
Asulin, Nofar;
Koren, Omry

Publication type:

Article

Developmental intestinal microbiome alterations in canine fading puppy syndrome: a prospective observational study.

Published in:

NPJ Biofilms & Microbiomes, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41522-021-00222-7

By:

Tal, Smadar;
Tikhonov, Evgenii;
Aroch, Itamar;
Hefetz, Lior;
Turjeman, Sondra;
Koren, Omry;
Kuzi, Sharon

Publication type:

Article

Gut microbiota determines the social behavior of mice and induces metabolic and inflammatory changes in their adipose tissue.

Published in:

NPJ Biofilms & Microbiomes, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41522-021-00193-9

By:

Agranyoni, Oryan;
Meninger-Mordechay, Sapir;
Uzan, Atara;
Ziv, Oren;
Salmon-Divon, Mali;
Rodin, Dmitry;
Raz, Olga;
Koman, Igor;
Koren, Omry;
Pinhasov, Albert;
Navon-Venezia, Shiri

Publication type:

Article

Petroleum Bioremediation in Seawater Using Guano as the Fertilizer.

Published in:

Bioremediation Journal, 2006, v. 10, n. 3, p. 83, doi. 10.1080/10889860600939492

By:

Knezevich, Vishnia;
Koren, Omry;
Ron, ElioraZ.;
Rosenberg, Eugene

Publication type:

Article

In utero human intestine contains maternally derived bacterial metabolites.

Published in:

Microbiome, 2025, v. 13, n. 1, p. 1, doi. 10.1186/s40168-025-02110-0

By:

Wang, Wenjia;
Gu, Weihong;
Schweitzer, Ron;
Koren, Omry;
Khatib, Soliman;
Tseng, George;
Konnikova, Liza

Publication type:

Article

Dysbiosis of Skin Microbiota in Psoriatic Patients: Co-occurrence of Fungal and Bacterial Communities.

Published in:

Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00438

By:

Stehlikova, Zuzana;
Kostovcik, Martin;
Kostovcikova, Klara;
Kverka, Miloslav;
Juzlova, Katerina;
Rob, Filip;
Hercogova, Jana;
Bohac, Petr;
Pinto, Yishay;
Uzan, Atara;
Koren, Omry;
Tlaskalova-Hogenova, Helena;
Jiraskova Zakostelska, Zuzana

Publication type:

Article

Characterizing the gut (Gallus gallus) microbiota following the consumption of an iron biofortified Rwandan cream seeded carioca (Phaseolus Vulgaris L.) bean-based diet.

Published in:

PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182431

By:

Reed, Spenser;
Neuman, Hadar;
Glahn, Raymond P.;
Koren, Omry;
Tako, Elad

Publication type:

Article

Comparison of canine colostrum and milk using a multi-omics approach.

Published in:

Animal Microbiome, 2024, v. 6, n. 1, p. 1, doi. 10.1186/s42523-024-00309-4

By:

Cohen, Alisa;
Turjeman, Sondra;
Levin, Rachel;
Tal, Smadar;
Koren, Omry

Publication type:

Article

Gut microbiome-metabolome interactions predict host condition.

Published in:

Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-023-01737-1

By:

Shtossel, Oshrit;
Koren, Omry;
Shai, Iris;
Rinott, Ehud;
Louzoun, Yoram

Publication type:

Article

Recipient-independent, high-accuracy FMT-response prediction and optimization in mice and humans.

Published in:

Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01623-w

By:

Shtossel, Oshrit;
Turjeman, Sondra;
Riumin, Alona;
Goldberg, Michael R.;
Elizur, Arnon;
Bekor, Yarin;
Mor, Hadar;
Koren, Omry;
Louzoun, Yoram

Publication type:

Article

Sex dependent effects of post-natal penicillin on brain, behavior and immune regulation are prevented by concurrent probiotic treatment.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-67271-4

By:

Kayyal, Marya;
Javkar, Tanvi;
Firoz Mian, M.;
Binyamin, Dana;
Koren, Omry;
Neufeld, Karen-Anne McVey;
Forsythe, Paul

Publication type:

Article

Giardiasis and diarrhea in dogs: Does the microbiome matter?

Published in:

Journal of Veterinary Internal Medicine, 2024, v. 38, n. 1, p. 152, doi. 10.1111/jvim.16894

By:

Kuzi, Sharon;
Zgairy, Soha;
Byrne, Barbara A.;
Suchodolski, Jan;
Turjeman, Sondra C.;
Park, So Young;
Aroch, Itamar;
Hong, Mike;
Koren, Omry;
Lavy, Eran

Publication type:

Article

The microbial diversity following antibiotic treatment of Clostridioides difficile infection.

Published in:

2021

By:

Binyamin, Dana;
Nitzan, Orna;
Azrad, Maya;
Hamo, Zohar;
Koren, Omry;
Peretz, Avi

Publication type:

journal article

A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets.

Published in:

PLoS Computational Biology, 2013, v. 9, n. 1, p. 1, doi. 10.1371/journal.pcbi.1002863

By:

Koren, Omry;
Knights, Dan;
Gonzalez, Antonio;
Waldron, Levi;
Segata, Nicola;
Knight, Rob;
Huttenhower, Curtis;
Ley, Ruth E.

Publication type:

Article

Detecting life by behavior, the overlooked sensitivity of behavioral assays.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-69942-y

By:

Zinßmeister, Daniela;
Leibovitch, Moshe;
Natan, Eviatar;
Turjeman, Sondra;
Koren, Omry;
Travisano, Michael;
Vortman, Yoni;
Baselga-Cervera, Beatriz

Publication type:

Article

Microbiome Preprocessing Machine Learning Pipeline.

Published in:

Frontiers in Immunology, 2021, v. 12, p. 1, doi. 10.3389/fimmu.2021.677870

By:

Jasner, Yoel;
Belogolovski, Anna;
Ben-Itzhak, Meirav;
Koren, Omry;
Louzoun, Yoram

Publication type:

Article

Fecal microbiome composition in neonates with or without urinary tract infection.

Published in:

Pediatric Nephrology, 2025, v. 40, n. 4, p. 1015, doi. 10.1007/s00467-024-06612-1

By:

Bahat, Hilla;
Paret, Michal;
Uzan, Atara;
Klainer, Hodaya;
Sharon, Efrat;
Turjeman, Sondra;
Koren, Omry;
Goldman, Michael;
Youngster, Ilan

Publication type:

Article

Characterization of Clostridioides difficile Strains, the Disease Severity, and the Microbial Changes They Induce.

Published in:

Journal of Clinical Medicine, 2020, v. 9, n. 12, p. 4099, doi. 10.3390/jcm9124099

By:

Rohana, Hanan;
Azrad, Maya;
Nitzan, Orna;
Adler, Amos;
Binyamin, Dana;
Koren, Omry;
Peretz, Avi

Publication type:

Article

Responses of Gut Microbiota to Diet Composition and Weight Loss in Lean and Obese Mice.

Published in:

Obesity (19307381), 2012, v. 20, n. 4, p. 738, doi. 10.1038/oby.2011.111

By:

Ravussin, Yann;
Koren, Omry;
Spor, Ayme;
LeDuc, Charles;
Gutman, Roee;
Stombaugh, Jesse;
Knight, Rob;
Ley, Ruth E.;
Leibel, Rudolph L.

Publication type:

Article

Low-dose penicillin in early life induces long-term changes in murine gut microbiota, brain cytokines and behavior.

Published in:

Nature Communications, 2017, v. 8, n. 4, p. 15062, doi. 10.1038/ncomms15062

By:

Leclercq, Sophie;
Mian, Firoz M.;
Stanisz, Andrew M.;
Bindels, Laure B.;
Cambier, Emmanuel;
Ben-Amram, Hila;
Koren, Omry;
Forsythe, Paul;
Bienenstock, John

Publication type:

Article

The effects of the Green-Mediterranean diet on cardiometabolic health are linked to gut microbiome modifications: a randomized controlled trial.

Published in:

Genome Medicine, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13073-022-01015-z

By:

Rinott, Ehud;
Meir, Anat Yaskolka;
Tsaban, Gal;
Zelicha, Hila;
Kaplan, Alon;
Knights, Dan;
Tuohy, Kieran;
Scholz, Matthias Uwe;
Koren, Omry;
Stampfer, Meir J.;
Wang, Dong D.;
Shai, Iris;
Youngster, Ilan

Publication type:

Article

Antibiotic use during pregnancy: how bad is it?

Published in:

2016

By:

Kuperman, Amir A.;
Koren, Omry

Publication type:

journal article

How holobionts get sick--toward a unifying scheme of disease.

Published in:

Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0281-7

By:

Pitlik, Silvio D.;
Koren, Omry

Publication type:

Article

Antidepressants affect gut microbiota and Ruminococcus flavefaciens is able to abolish their effects on depressive-like behavior.

Published in:

Translational Psychiatry, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41398-019-0466-x

By:

Lukić, Iva;
Getselter, Dmitriy;
Ziv, Oren;
Oron, Oded;
Reuveni, Eli;
Koren, Omry;
Elliott, Evan

Publication type:

Article

Nicotianamine-chelated iron positively affects iron status, intestinal morphology and microbial populations in vivo (Gallus gallus).

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-57598-3

By:

Beasley, Jesse T.;
Johnson, Alexander A. T.;
Kolba, Nikolai;
Bonneau, Julien P.;
Glahn, Raymond P.;
Ozeri, Lital;
Koren, Omry;
Tako, Elad

Publication type:

Article