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Detection and classification of the integrative conjugative elements of Lactococcus lactis.
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- BMC Genomics, 2024, v. 25, n. 1, p. 1, doi. 10.1186/s12864-024-10255-9
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- Article
Early feeding leads to molecular maturation of the gut mucosal immune system in suckling piglets.
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- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1208891
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- Article
Development of a reproducible small intestinal microbiota model and its integration into the SHIME®-system, a dynamic in vitro gut model.
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- Frontiers in Microbiology, 2023, v. 14, p. 1, doi. 10.3389/fmicb.2022.1054061
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- Article
Endogenous small intestinal microbiome determinants of transient colonisation efficiency by bacteria from fermented dairy products: a randomised controlled trial.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01491-4
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- Article
The Pleiotropic Effects of Carbohydrate-Mediated Growth Rate Modifications in Bifidobacterium longum NCC 2705.
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- Microorganisms, 2023, v. 11, n. 3, p. 588, doi. 10.3390/microorganisms11030588
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- Article
The growth‐survival trade‐off is hard‐wired in the Lactococcus lactis gene regulation network.
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- Environmental Microbiology Reports, 2022, v. 14, n. 4, p. 632, doi. 10.1111/1758-2229.13073
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- Article
Assessing the Impact of Diet on the Mucosa-Adhered Microbiome in Piglets Using Comparative Analysis of Rectal Swabs and Colon Content.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.804986
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- Article
The Possible Link Between Manufacturing and Probiotic Efficacy; a Molecular Point of View on Bifidobacterium.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.812536
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- Article
Correlation between brain function and ADHD symptom changes in children with ADHD following a few-foods diet: an open-label intervention trial.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-01684-7
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- Article
Dietary calcium phosphate strongly impacts gut microbiome changes elicited by inulin and galacto-oligosaccharides consumption.
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- Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01148-0
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- Article
Dietary calcium phosphate strongly impacts gut microbiome changes elicited by inulin and galacto-oligosaccharides consumption.
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- Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01148-0
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- Article
Colonizing Microbes, IL-10 and IL-22: Keeping the Peace at the Mucosal Surface.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.729053
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- Article
Characterization of the pathophysiological determinants of diarrheagenic Escherichia coli infection using a challenge model in healthy adults.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-85161-1
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- Article
Human milk extracellular vesicles target nodes in interconnected signalling pathways that enhance oral epithelial barrier function and dampen immune responses.
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- Journal of Extracellular Vesicles, 2021, v. 10, n. 5, p. 1, doi. 10.1002/jev2.12071
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- Article
Phenotypic and genetic characterization of differential galacto-oligosaccharide utilization in Lactobacillus plantarum.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-78721-4
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- Article
Lipoproteins Contribute to the Anti-inflammatory Capacity of Lactobacillus plantarum WCFS1.
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- Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.01822
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- Article
Visualisation of dCas9 target search in vivo using an open-microscopy framework.
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- Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11514-0
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- Article
Corrigendum: Sialyllactose and Galactooligosaccharides Promote Epithelial Barrier Functioning and Distinctly Modulate Microbiota Composition and Short Chain Fatty Acid Production In Vitro.
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- 2019
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- Correction Notice
Sialyllactose and Galactooligosaccharides Promote Epithelial Barrier Functioning and Distinctly Modulate Microbiota Composition and Short Chain Fatty Acid Production In Vitro.
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- Frontiers in Immunology, 2019, p. N.PAG, doi. 10.3389/fimmu.2019.00094
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- Article
Lactic Acid Bacteria for Delivery of Endogenous or Engineered Therapeutic Molecules.
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- Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.01821
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- Article
KREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics.
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- GigaScience, 2018, v. 7, n. 7, p. N.PAG, doi. 10.1093/gigascience/giy078
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- Article
Metatranscriptome analysis of the microbial fermentation of dietary milk proteins in the murine gut.
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- PLoS ONE, 2018, v. 13, n. 4, p. 1, doi. 10.1371/journal.pone.0194066
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- Article
High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice.
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- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0258-6
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- Article
Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats.
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- Environmental Microbiology, 2016, v. 18, n. 12, p. 4974, doi. 10.1111/1462-2920.13455
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- Article
The Variable Regions of Lactobacillus rhamnosus Genomes Reveal the Dynamic Evolution of Metabolic and Host-Adaptation Repertoires.
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- Genome Biology & Evolution, 2016, v. 8, n. 6, p. 1889, doi. 10.1093/gbe/evw123
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- Article
Exopolysaccharides produced by lactic acid bacteria: from health-promoting benefits to stress tolerance mechanisms.
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- Applied Microbiology & Biotechnology, 2016, v. 100, n. 9, p. 3877, doi. 10.1007/s00253-016-7471-2
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- Article
Functional Profiling of Unfamiliar Microbial Communities Using a Validated De Novo Assembly Metatranscriptome Pipeline.
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- PLoS ONE, 2016, v. 11, n. 1, p. 1, doi. 10.1371/journal.pone.0146423
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- Article
Comparison of the effects of five dietary fibers on mucosal transcriptional profiles, and luminal microbiota composition and SCFA concentrations in murine colon.
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- Molecular Nutrition & Food Research, 2015, v. 59, n. 8, p. 1590, doi. 10.1002/mnfr.201400597
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- Article
Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions.
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- Scientific Reports, 2015, p. 11981, doi. 10.1038/srep11981
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- Article
Towards microbial fermentation metabolites as markers for health benefits of prebiotics.
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- Nutrition Research Reviews, 2015, v. 28, n. 1, p. 42, doi. 10.1017/S0954422415000037
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- Article
Physiological and cell morphology adaptation of Bacillus subtilis at near-zero specific growth rates: a transcriptome analysis.
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- Environmental Microbiology, 2015, v. 17, n. 2, p. 346, doi. 10.1111/1462-2920.12676
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- Article
Immunomodulatory Properties of Streptococcus and Veillonella Isolates from the Human Small Intestine Microbiota.
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- PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0114277
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- Article
Lactate racemase is a nickel-dependent enzyme activated by a widespread maturation system.
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- Nature Communications, 2014, v. 5, n. 4, p. 3615, doi. 10.1038/ncomms4615
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- Article
Addendum: Enterotypes of the human gut microbiome.
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- Nature, 2014, v. 506, n. 7489, p. 516, doi. 10.1038/nature13075
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- Article
Transcriptome signatures of class I and III stress response deregulation in Lactobacillus plantarum reveal pleiotropic adaptation.
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- Microbial Cell Factories, 2013, v. 12, n. 1, p. 1, doi. 10.1186/1475-2859-12-112
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- Article
Comparative Genomics Analysis of <i>Streptococcus</i> Isolates from the Human Small Intestine Reveals their Adaptation to a Highly Dynamic Ecosystem.
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- PLoS ONE, 2013, v. 8, n. 12, p. 1, doi. 10.1371/journal.pone.0083418
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- Article
Multifactorial diversity sustains microbial community stability.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 11, p. 2126, doi. 10.1038/ismej.2013.108
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- Article
Intestinal colonization: How key microbial players become established in this dynamic process.
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- BioEssays, 2013, v. 35, n. 10, p. 913, doi. 10.1002/bies.201300073
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- Article
A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-530
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- Article
Genotypic adaptations associated with prolonged persistence of Lactobacillus plantarum in the murine digestive tract.
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- Biotechnology Journal, 2013, v. 8, n. 8, p. 895, doi. 10.1002/biot.201200259
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- Article
Quantitative physiology of Lactococcus lactis at extreme low-growth rates.
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- Environmental Microbiology, 2013, v. 15, n. 8, p. 2319, doi. 10.1111/1462-2920.12104
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- Article
Butyrate-producing Clostridium cluster XIVa species specifically colonize mucins in an in vitro gut model.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 5, p. 949, doi. 10.1038/ismej.2012.158
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- Article
Microbiota conservation and BMI signatures in adult monozygotic twins.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 707, doi. 10.1038/ismej.2012.146
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- Article
Gut bacteria-host metabolic interplay during conventionalisation of the mouse germfree colon.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 743, doi. 10.1038/ismej.2012.142
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- Article
The Impact of <i>Lactobacillus plantarum</i> WCFS1 Teichoic Acid D-Alanylation on the Generation of Effector and Regulatory T-cells in Healthy Mice.
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- PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0063099
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- Article
Oxygen Relieves the CO<sub>2</sub> and Acetate Dependency of <i>Lactobacillus johnsonii</i> NCC 533.
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- PLoS ONE, 2013, v. 8, n. 2, p. 1, doi. 10.1371/journal.pone.0057235
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- Article
Dietary Heme Alters Microbiota and Mucosa of Mouse Colon without Functional Changes in Host-Microbe Cross-Talk.
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- PLoS ONE, 2012, v. 7, n. 12, p. 1, doi. 10.1371/journal.pone.0049868
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- Article
Microbiome dynamics of human epidermis following skin barrier disruption.
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- Genome Biology, 2012, v. 13, n. 11, p. 1, doi. 10.1186/gb-2012-13-11-r101
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- Article
The impact of probiotics and prebiotics on the immune system.
- Published in:
- Nature Reviews Immunology, 2012, v. 12, n. 10, p. 728, doi. 10.1038/nri3312
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- Article
Temporal and spatial interplay of microbiota and intestinal mucosa drive establishment of immune homeostasis in conventionalized mice.
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- Mucosal Immunology (1933-0219), 2012, v. 5, n. 5, p. 567, doi. 10.1038/mi.2012.32
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- Article